RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 PKD2L2Q9NZM6 624 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 TRPV2Q9Y5S1 764 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 A0A0A6YYK5 440 aaPredicted RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 TSPAN3O60637 253 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 CKBP12277 381 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 CCDC130P13994 396 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 TM4SF1P30408 202 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 OVGP1Q12889 678 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 NFE2Q16621 373 aaPredicted RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 NFIL3Q16649 462 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 CELF3Q5SZQ8 465 aaKnown RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 ERMARDQ5T6L9 678 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 IQSEC1Q6DN90 963 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 TFAP2DQ7Z6R9 452 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 PRPF39Q86UA1 669 aaKnown RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 HERC6Q8IVU3 1022 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 TRPM4Q8TD43 1214 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 MKL1Q969V6 931 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 SLC35C1Q96A29 364 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 SERPINB12Q96P63 405 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 MYCBPQ99417 103 aaPredicted RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 SPATA16Q9BXB7 569 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 CIPCQ9C0C6 399 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 BRD8Q9H0E9 1235 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 SNCAIPQ9Y6H5 919 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 SOAT2O75908 522 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 GLRBP48167 497 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 DNAJC3Q13217 504 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 BTG3Q14201 252 aaPredicted RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 MTFR1Q15390 333 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 LRRC36Q1X8D7 754 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 ZPBP2Q6X784 338 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 MAP4K3Q8IVH8 894 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 SLC2A14Q8TDB8 520 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 WNK4Q96J92 1243 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 C17orf80Q9BSJ5 609 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 PABPC3Q9H361 631 aaKnown RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 STX18Q9P2W9 335 aaKnown RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 RNF112Q9ULX5 631 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 RUVBL2Q9Y230 463 aaKnown RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 LOC100653049A0A140TA62 436 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 AKAP10O43572 662 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 PFDN1O60925 122 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 KRT34O76011 436 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 SOAT1P35610 550 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 C1QBPQ07021 282 aaKnown RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 CCDC15Q0P6D6 951 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 CBWD6Q4V339 395 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 CBWD3Q5JTY5 395 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 CBWD5Q5RIA9 395 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 UGT3A1Q6NUS8 523 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 ARMC6Q6NXE6 501 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 LRRC6Q86X45 466 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 BRSK2Q8IWQ3 736 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 ACTRT1Q8TDG2 376 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 USP13Q92995 863 aaPredicted RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 HMX1Q9NP08 348 aaPredicted RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 SUFUQ9UMX1 484 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 VPS9D1Q9Y2B5 631 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 MTO1Q9Y2Z2 717 aaKnown RBP9.36□□□□□ -0.91
NEK1-207ENST00000511633 CDY2AQ9Y6F7 541 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 CDY1Q9Y6F8 540 aa9.36□□□□□ -0.91
NEK1-207ENST00000511633 MYO1GB0I1T2 1018 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 SERPINB4P48594 390 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 ELAVL2Q12926 359 aaKnown RBP9.35□□□□□ -0.91
NEK1-207ENST00000511633 UNC45BQ8IWX7 931 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 OTUB1Q96FW1 271 aaPredicted RBP9.35□□□□□ -0.91
NEK1-207ENST00000511633 THTPAQ9BU02 230 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 ASB7Q9H672 318 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 YY1AP1Q9H869 796 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 PDGFCQ9NRA1 345 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 SMPD4Q9NXE4 827 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 WHRNQ9P202 907 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 SPTLC1O15269 473 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 GJB6O95452 261 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 CPA2P48052 419 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 DLG4P78352 724 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 SLC39A12Q504Y0 691 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 AGAP9Q5VTM2 703 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 C16orf89Q6UX73 402 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 TRIM48Q8IWZ4 208 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 COLGALT1Q8NBJ5 622 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 UCMAQ8WVF2 138 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 SMARCD1Q96GM5 515 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 NR1H4Q96RI1 486 aaPredicted RBP9.35□□□□□ -0.91
NEK1-207ENST00000511633 TINF2Q9BSI4 451 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 WDR18Q9BV38 432 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 RNF208Q9H0X6 261 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 NEUROG2Q9H2A3 272 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 RIC8BQ9NVN3 520 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 MEIS2O14770 477 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 SKAP2O75563 359 aaPredicted RBP9.35□□□□□ -0.91
NEK1-207ENST00000511633 SUPT7LO94864 414 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 KLHL2O95198 593 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 KLRC2P26717 231 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 AXLP30530 894 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 CCR1P32246 355 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 SCNN1BP51168 640 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 KCNK10P57789 538 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 MCL1Q07820 350 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms