RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 CNGA2Q16280 664 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 CYP1B1Q16678 543 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 C6orf10Q5SRN2 563 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 RNF187Q5TA31 235 aaPredicted RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 ARMC3Q5W041 872 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 DUS1LQ6P1R4 473 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 C4orf50Q6ZRC1 276 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 SLC51BQ86UW2 128 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 TXNDC2Q86VQ3 553 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 RAB11FIP4Q86YS3 637 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 LGI4Q8N135 537 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 LZTR1Q8N653 840 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 MB21D1Q8N884 522 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 USP38Q8NB14 1042 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 PHC3Q8NDX5 983 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 ZNF420Q8TAQ5 688 aaPredicted RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 CTNNBL1Q8WYA6 563 aaPredicted RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 TRIB2Q92519 343 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 RPGRQ92834 1020 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 FERMT2Q96AC1 680 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 ZBTB8AQ96BR9 441 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 SLC7A6OSQ96CW6 309 aaPredicted RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 PTCD3Q96EY7 689 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 CEP19Q96LK0 163 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 RPS6KC1Q96S38 1066 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 NUP88Q99567 741 aaPredicted RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 LRRC1Q9BTT6 524 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 USP44Q9H0E7 712 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 MYLK2Q9H1R3 596 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 RPAP3Q9H6T3 665 aaPredicted RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 NMRK1Q9NWW6 199 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 NPAP1Q9NZP6 1156 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 BTBD7Q9P203 1132 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 CNOT8Q9UFF9 292 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 DCTN4Q9UJW0 460 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 ANGPTL2Q9UKU9 493 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 SORCS3Q9UPU3 1222 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 PLAAQ9Y263 795 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 TLR6Q9Y2C9 796 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 RRP7AQ9Y3A4 280 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 SPO11Q9Y5K1 396 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 USH1CQ9Y6N9 552 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 FLT4P35916 1363 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 TNKSO95271 1327 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 DCCP43146 1447 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 MEGF6O75095 1541 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 LOC105371267A0A1B0GV96 52 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 EIF3FO00303 357 aaPredicted RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 MEIS1O00470 390 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 TPD52L2O43399 206 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 BUD23O43709 281 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 MARCH6O60337 910 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 UBOX5O94941 541 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 ZNF205O95201 554 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 ESRRBO95718 433 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 TSHRP16473 764 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 KRT4P19013 534 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 PMLP29590 882 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 PRDX6P30041 224 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 PDIA3P30101 505 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 CIITAP33076 1130 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 CTSKP43235 329 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 TRAPPC10P48553 1259 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 HSPA13P48723 471 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 CDK9P50750 372 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 FXR1P51114 621 aaKnown RBP eCLIP2.38□□□□□ -2.03
CAST-226ENST00000509529 ZNF132P52740 706 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 COPB1P53618 953 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 ADARP55265 1226 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 RNF4P78317 190 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 IRX4P78413 519 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 RAPGEF1Q13905 1077 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 DLGAP5Q15398 846 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 NAB2Q15742 525 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 TCP11X2Q5H9J9 407 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 BICRALQ6AI39 1079 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 SNRNP48Q6IEG0 339 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 TRMT10CQ7L0Y3 403 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 TAOK1Q7L7X3 1001 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 ADAMTSL2Q86TH1 951 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 ITIH5Q86UX2 942 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 SGMS1Q86VZ5 419 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 KIAA0825Q8IV33 1275 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 CCDC110Q8TBZ0 833 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 FRS2Q8WU20 508 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 CASKIN2Q8WXE0 1202 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 RIN2Q8WYP3 895 aaPredicted RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 LPIN2Q92539 896 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 JADE3Q92613 823 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 ATP6V0A1Q93050 837 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 CCDC43Q96MW1 224 aaKnown RBP2.38□□□□□ -2.03
CAST-226ENST00000509529 C7orf26Q96N11 449 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 GBP5Q96PP8 586 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 CDRT15Q96T59 188 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 YME1L1Q96TA2 773 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.38□□□□□ -2.03
CAST-226ENST00000509529 SDF4Q9BRK5 362 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 SIKE1Q9BRV8 207 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 SPZ1Q9BXG8 430 aa2.38□□□□□ -2.03
CAST-226ENST00000509529 TLR10Q9BXR5 811 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms