RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 A0A087WV62 115 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 H0YIZ8 118 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 QSOX1O00391 747 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 KIAA0355O15063 1070 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 CCNT2O60583 730 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 PMPCBO75439 489 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 PRKCBP05771 671 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 ARP10275 920 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 GKP32189 559 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 TPTEP56180 551 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 E2F1Q01094 437 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 TNFAIP2Q03169 654 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 COL10A1Q03692 680 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 MAPKAPK3Q16644 382 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 ARHGAP15Q53QZ3 475 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 PCID2Q5JVF3 399 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 TSTD2Q5T7W7 516 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 ABLIM2Q6H8Q1 611 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 MRNIPQ6NTE8 343 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 WDR53Q7Z5U6 358 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 RAB11FIP4Q86YS3 637 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 RASAL3Q86YV0 1011 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 MYLK4Q86YV6 388 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 ZNF527Q8NB42 609 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 RP9Q8TA86 221 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 IPO4Q8TEX9 1081 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 ZNF384Q8TF68 577 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 ABHD5Q8WTS1 349 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 LENG8Q96PV6 779 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 MRIQ9BWK5 157 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 NECTIN3Q9NQS3 549 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 IGSF9Q9P2J2 1179 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 LPAR3Q9UBY5 353 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 NKX1-2Q9UD57 310 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 TLK1Q9UKI8 766 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 RIMKLBQ9ULI2 386 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 GABRQQ9UN88 632 aa4.77□□□□□ -1.65
TOPBP1-204ENST00000505804 PIP5K1BO14986 540 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 ZSCAN9O15535 394 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 FFAR2O15552 330 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 PDE8BO95263 885 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 DLDP09622 509 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 SRGAP2BP0DMP2 458 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 COL11A2P13942 1736 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 MST1P26927 711 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 PTH2RP49190 550 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 CACNA2D1P54289 1103 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 EEFSECP57772 596 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 GPS1Q13098 491 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 SLC5A9Q2M3M2 681 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 TBC1D25Q3MII6 688 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 FAM153CQ494X1 144 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 ZNF362Q5T0B9 420 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 L1TD1Q5T7N2 865 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 PGBD2Q6P3X8 592 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 ANKRD16Q6P6B7 361 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 GRASPQ7Z6J2 395 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 KRT73Q86Y46 540 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 FSTL5Q8N475 847 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 SIRT6Q8N6T7 355 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 ENAHQ8N8S7 591 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 MBD3L2Q8NHZ7 208 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 SUN3Q8TAQ9 357 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 CTHRC1Q96CG8 243 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 DUSP26Q9BV47 211 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 STEAP1Q9UHE8 339 aa4.76□□□□□ -1.65
TOPBP1-204ENST00000505804 WDR33Q9C0J8 1336 aaKnown RBP4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 CES2O00748 559 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 SPRY2O43597 315 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 CD19P15391 556 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 CREB1P16220 341 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 ITPKBP27987 946 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 RBL1P28749 1068 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 HTR7P34969 479 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 CLK3P49761 638 aaKnown RBP4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 TRIM14Q14142 442 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 PUM3Q15397 648 aaKnown RBP4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 AKNAD1Q5T1N1 836 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 ABHD11Q8NFV4 315 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 GRAMD1AQ96CP6 724 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 WDYHV1Q96HA8 205 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 FSD1LQ9BXM9 530 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 ZCWPW1Q9H0M4 648 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 EPS8L2Q9H6S3 715 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 CPNE5Q9HCH3 593 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 OBP2BQ9NPH6 170 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 ASB6Q9NWX5 421 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 SLC17A6Q9P2U8 582 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 MGAT4CQ9UBM8 478 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 AMFRQ9UKV5 643 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 ADAMTS5Q9UNA0 930 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 ENTPD2Q9Y5L3 495 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 COL15A1P39059 1388 aa4.75□□□□□ -1.65
TOPBP1-204ENST00000505804 GOLGA6L3A6NEY3 463 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 AQP12BA6NM10 295 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 GCOM1H8Y6P7 765 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 TJP3O95049 919 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 VIPP01282 170 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 HNRNPCP07910 306 aaKnown RBP eCLIP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms