RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 EMC2Q15006 297 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 N4BP2L1Q5TBK1 243 aaPredicted RBP17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 SLFN11Q7Z7L1 901 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 ULK2Q8IYT8 1036 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 PPHLN1Q8NEY8 458 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 RPS6KL1Q9Y6S9 549 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 MYL4P12829 197 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 S100A5P33763 92 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 NPTX2P47972 431 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 DEFA1P59665 94 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 DEFA3P59666 94 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 KCNA1Q09470 495 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 ARL8BQ9NVJ2 186 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 TIMM44O43615 452 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 SLITRK3O94933 977 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 TFE3P19532 575 aaPredicted RBP17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 KYAT1Q16773 422 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 BMT2Q1RMZ1 405 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 TXNRD3Q86VQ6 643 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 CLVS1Q8IUQ0 354 aaPredicted RBP17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 FAM71AQ8IYT1 594 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 ROBO3Q96MS0 1386 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 SMIM22K7EJ46 135 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 RPS6P62753 249 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 TDRD5Q8NAT2 981 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 STKLD1Q8NE28 680 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 ZNF317Q96PQ6 595 aaPredicted RBP17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 GPRC5CQ9NQ84 441 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 LGALS13Q9UHV8 139 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 LIASO43766 372 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 USP1O94782 785 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 LYNP07948 512 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 OCM2P0CE71 109 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 OCMP0CE72 109 aaPredicted RBP17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 ZSCAN5DPP0CG00 497 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 RPS12P25398 132 aaKnown RBP17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 RGS7P49802 495 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 C21orf59P57076 290 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 SLC5A9Q2M3M2 681 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 SNRNP48Q6IEG0 339 aaKnown RBP17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 BEST2Q8NFU1 509 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 PIWIL2Q8TC59 973 aaKnown RBP17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 TOPORSQ9NS56 1045 aaPredicted RBP17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 A0A087WXM4 84 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 KANSL1LA0AUZ9 987 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 ALOX15BO15296 676 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 ZBTB41Q5SVQ8 909 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 KLHL23Q8NBE8 558 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 SLC4A9Q96Q91 983 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 KLHL25Q9H0H3 589 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 GPAMQ9HCL2 828 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 KCNMB3Q9NPA1 279 aa17.77■□□□□ 0.44
HMGXB3-201ENST00000502717 GRAP2O75791 330 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 XPAP23025 273 aaPredicted RBP17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 OR6P1Q8NGX9 317 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 TFB1MQ8WVM0 346 aaKnown RBP17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 PHACTR1Q9C0D0 580 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 ACSS3Q9H6R3 686 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 KIF17Q9P2E2 1029 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 TPST1O60507 370 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 UQCRBP14927 111 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 SNAPC2Q13487 334 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 RBM44Q6ZP01 1051 aaKnown RBP17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 GTF3C2Q8WUA4 911 aaPredicted RBP17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 FAM151AQ8WW52 585 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 ASPSCR1Q9BZE9 553 aa17.77■□□□□ 0.43
HMGXB3-201ENST00000502717 ATP8B3O60423 1300 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 ETS2P15036 469 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 CDH2P19022 906 aaPredicted RBP17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 SLC25A3Q00325 362 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 NME3Q13232 169 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 EMC10Q5UCC4 262 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 ALLCQ8N6M5 410 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 RNF149Q8NC42 400 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 ELMO2Q96JJ3 720 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 KPNA4O00629 521 aaPredicted RBP17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 MAFGO15525 162 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 ARP10275 920 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 CCDC153Q494R4 210 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 HYIQ5T013 277 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 PWWP2AQ96N64 755 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 PRDM5Q9NQX1 630 aaPredicted RBP17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 HACD3Q9P035 362 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 POLLQ9UGP5 575 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 RPTORQ8N122 1335 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 PTGER2P43116 358 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 PPP3CAQ08209 521 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 KCTD19Q17RG1 926 aaPredicted RBP17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 SLC9A9Q8IVB4 645 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 WNK4Q96J92 1243 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 TARS2Q9BW92 718 aaKnown RBP17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 PLGRKTQ9HBL7 147 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 ZC4H2Q9NQZ6 224 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 FBXO6Q9NRD1 293 aaPredicted RBP17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 GALNT8Q9NY28 637 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 USP18Q9UMW8 372 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 CASZ1Q86V15 1759 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 HNRNPRO43390 633 aaKnown RBP17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 DCXO43602 365 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 HUS1O60921 280 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms