RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 CCDC62Q6P9F0 684 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 SLC26A11Q86WA9 606 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 PQLC3Q8N755 202 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 TTC8Q8TAM2 541 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 TTC17Q96AE7 1141 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 CFAP36Q96G28 342 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 PLAC1Q9HBJ0 212 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 PAK5Q9P286 719 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 KAT6AQ92794 2004 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 E7ENQ6 273 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 KCNN4O15554 427 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 HBP1O60381 514 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 GRAP2O75791 330 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 HAUS5O94927 633 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 C22orf31O95567 290 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 IL1BP01584 269 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 SLC26A2P50443 739 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 NDST1P52848 882 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 ARFIP2P53365 341 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 SLC10A6Q3KNW5 377 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 OR6B2Q6IFH4 312 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 LCLAT1Q6UWP7 414 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 DLK2Q6UY11 383 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 FBXO16Q8IX29 292 aaPredicted RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 SH3TC2Q8TF17 1288 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 PRR11Q96HE9 360 aaPredicted RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 ANKRD27Q96NW4 1050 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 TMEM120AQ9BXJ8 343 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 CADM1Q9BY67 442 aaKnown RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 SMARCAD1Q9H4L7 1026 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 PDZD7Q9H5P4 517 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 POPDC2Q9HBU9 364 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 DONSONQ9NYP3 566 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 BARX2Q9UMQ3 279 aaPredicted RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 CFAP69A5D8W1 941 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 ENTPD5O75356 428 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 P4HA1P13674 534 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 SERPINB3P29508 390 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 SERPINB4P48594 390 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 CDK16Q00536 496 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 FAM187BQ17R55 369 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 CCDC14Q49A88 953 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 TTC39BQ5VTQ0 682 aaPredicted RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 GADL1Q6ZQY3 521 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 CDHR3Q6ZTQ4 885 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 ILDR2Q71H61 639 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 CAND1Q86VP6 1230 aaKnown RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 RNPEPQ9H4A4 650 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 ASB7Q9H672 318 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 GBA2Q9HCG7 927 aaPredicted RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 FBXO6Q9NRD1 293 aaPredicted RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 GPRC5DQ9NZD1 345 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 TSPAN16Q9UKR8 245 aa16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 MTO1Q9Y2Z2 717 aaKnown RBP16.78■□□□□ 0.28
SEMA4D-220ENST00000492386 CXorf49A8MYA2 514 aaPredicted RBP16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 TRIM49D1C9J1S8 452 aa16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 ZBTB7AO95365 584 aa16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 RBL1P28749 1068 aa16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 KRT81Q14533 505 aa16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 PDK2Q15119 407 aa16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 RFWD3Q6PCD5 774 aa16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 SRPK1Q96SB4 655 aaKnown RBP16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 FRMD8Q9BZ67 464 aaPredicted RBP16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 GPATCH2LQ9NWQ4 482 aa16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 SUFUQ9UMX1 484 aa16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 LRRC42Q9Y546 428 aa16.77■□□□□ 0.28
SEMA4D-220ENST00000492386 KLF11O14901 512 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 CCDC22O60826 627 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 ECM2O94769 699 aaPredicted RBP16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 MAGEA6P43360 314 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 PHKA2P46019 1235 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 TNFAIP2Q03169 654 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 FAXCQ5TGI0 409 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 PPM1NQ8N819 430 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 PCDH19Q8TAB3 1148 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 CPB2Q96IY4 423 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 BTBD10Q9BSF8 475 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 PCDH18Q9HCL0 1135 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 ZC3H7BQ9UGR2 993 aaKnown RBP16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 ZNF180Q9UJW8 692 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 HEY1Q9Y5J3 304 aa16.77■□□□□ 0.27
SEMA4D-220ENST00000492386 DPYSL4O14531 572 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 APOL1O14791 398 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 TGM2P21980 687 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 PRKCHP24723 683 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 TMEM132DQ14C87 1099 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 TAF11Q15544 211 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 SLC9A4Q6AI14 798 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 C4orf50Q6ZRC1 276 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 MAP7D3Q8IWC1 876 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 FBXO41Q8TF61 875 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 NSL1Q96IY1 281 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 TRIP11Q15643 1979 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 CITO14578 2027 aa16.76■□□□□ 0.27
SEMA4D-220ENST00000492386 A0A087WZ62 844 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 BCLAF3A2AJT9 711 aaKnown RBP16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 C2orf71A6NGG8 1288 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms