RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 KAT7O95251 611 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 IRF1P10914 325 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 HNRNPLP14866 589 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMPD4-220ENST00000491319 ADORA2BP29275 332 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 EIF2DP41214 584 aaKnown RBP16.63■□□□□ 0.25
SMPD4-220ENST00000491319 DPYDQ12882 1025 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 ELF2Q15723 593 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 TCEAL6Q6IPX3 200 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 GPRIN1Q7Z2K8 1008 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 UNC93AQ86WB7 457 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 BBS7Q8IWZ6 715 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 CRYBG2Q8N1P7 616 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 ALLCQ8N6M5 410 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 MDGA1Q8NFP4 955 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 TCEAL3Q969E4 200 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 JAKMIP2Q96AA8 810 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 GOLPH3LQ9H4A5 285 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 APOBEC3GQ9HC16 384 aaKnown RBP16.63■□□□□ 0.25
SMPD4-220ENST00000491319 CSNK1G1Q9HCP0 422 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 ZDHHC4Q9NPG8 344 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 TBC1D14Q9P2M4 693 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 SH3BP1Q9Y3L3 701 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 PCDHGA5Q9Y5G8 931 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 GON4LQ3T8J9 2241 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 LAMA1P25391 3075 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 MAPK13O15264 365 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 KLF8O95600 359 aaPredicted RBP16.62■□□□□ 0.25
SMPD4-220ENST00000491319 APODP05090 189 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 KCNA4P22459 653 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 GBP1P32455 592 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 TIE1P35590 1138 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 GCLMP48507 274 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 LIMK1P53667 647 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 MRPS21P82921 87 aaKnown RBP16.62■□□□□ 0.25
SMPD4-220ENST00000491319 PPP3CAQ08209 521 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 INCA1Q0VD86 236 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 CRY1Q16526 586 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 NFIL3Q16649 462 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 TMEM92Q6UXU6 159 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 KRBA2Q6ZNG9 492 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 RASSF3Q86WH2 238 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 TTC30AQ86WT1 665 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 PHTF2Q8N3S3 785 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 IL17RCQ8NAC3 791 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 TXNDC5Q8NBS9 432 aaKnown RBP16.62■□□□□ 0.25
SMPD4-220ENST00000491319 TAS1R2Q8TE23 839 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 CCDC47Q96A33 483 aaKnown RBP16.62■□□□□ 0.25
SMPD4-220ENST00000491319 CNOT6LQ96LI5 555 aaKnown RBP16.62■□□□□ 0.25
SMPD4-220ENST00000491319 NACA2Q9H009 215 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 MMRN2Q9H8L6 949 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 ARHGEF4Q9NR80 690 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 COMMD8Q9NX08 183 aa16.62■□□□□ 0.25
SMPD4-220ENST00000491319 ACACBO00763 2458 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 ADAMTS9Q9P2N4 1935 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 SGK1O00141 431 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 CYP26A1O43174 497 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 TLR5O60602 858 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 KIF20AO95235 890 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 ADRB1P08588 477 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 FAM200BP0CF97 657 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 BCKDHBP21953 392 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 CREB5Q02930 508 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 EMC10Q5UCC4 262 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 IL31Q6EBC2 164 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 CLEC20AQ6ZU45 233 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 INTS8Q75QN2 995 aaKnown RBP16.61■□□□□ 0.25
SMPD4-220ENST00000491319 FAM186BQ8IYM0 893 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 NAT16Q8N8M0 369 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 OTUB2Q96DC9 234 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 CNTNAP3BQ96NU0 1288 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 CNTNAP3Q9BZ76 1288 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 IMPG2Q9BZV3 1241 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 FBXO44Q9H4M3 255 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 TLR8Q9NR97 1041 aaKnown RBP16.61■□□□□ 0.25
SMPD4-220ENST00000491319 CACNA1BQ00975 2339 aa16.61■□□□□ 0.25
SMPD4-220ENST00000491319 A0A1W2PQ27 194 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 A0A1W2PQ64 194 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 A0A1W2PQD8 194 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 HHLA1C9JL84 531 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 RHOBTB1O94844 696 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 TBX18O95935 607 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 KRT13P13646 458 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 CD58P19256 250 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 GRIA2P42262 883 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 KIR2DL1P43626 348 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-220ENST00000491319 GAD2Q05329 585 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 USP39Q53GS9 565 aaKnown RBP16.6■□□□□ 0.25
SMPD4-220ENST00000491319 PMS2CLQ68D20 193 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 ETFBKMTQ8IXQ9 262 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 GUF1Q8N442 669 aaKnown RBP16.6■□□□□ 0.25
SMPD4-220ENST00000491319 WHAMMQ8TF30 809 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 HNRNPABQ99729 332 aaKnown RBP16.6■□□□□ 0.25
SMPD4-220ENST00000491319 NT5C1AQ9BXI3 368 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 NIF3L1Q9GZT8 377 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 SPHK2Q9NRA0 654 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 VPS45Q9NRW7 570 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 OSER1Q9NX31 292 aa16.6■□□□□ 0.25
SMPD4-220ENST00000491319 MAP1BP46821 2468 aaKnown RBP16.6■□□□□ 0.25
SMPD4-220ENST00000491319 A0A0A0MRY4 1105 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms