RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 MID2Q9UJV3 735 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 COX11Q9Y6N1 276 aa5.18□□□□□ -1.58
ITGB1-214ENST00000488427 RNF17Q9BXT8 1623 aaKnown RBP5.18□□□□□ -1.58
ITGB1-214ENST00000488427 POLR1AO95602 1720 aaPredicted RBP5.17□□□□□ -1.58
ITGB1-214ENST00000488427 CLCA1A8K7I4 914 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 H7C4K7 107 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 PMM2O15305 246 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 MYCLP12524 364 aaPredicted RBP5.17□□□□□ -1.58
ITGB1-214ENST00000488427 MYL4P12829 197 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 PGDP52209 483 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 AK2P54819 239 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 BTKQ06187 659 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 GALEQ14376 348 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 PCID2Q5JVF3 399 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 KIAA1614Q5VZ46 1190 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 COL23A1Q86Y22 540 aaPredicted RBP5.17□□□□□ -1.58
ITGB1-214ENST00000488427 RASAL3Q86YV0 1011 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 ATP11CQ8NB49 1132 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 ACRBPQ8NEB7 543 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 DNAJB14Q8TBM8 379 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 C17orf80Q9BSJ5 609 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 APOL5Q9BWW9 433 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 VN1R3Q9BXE9 311 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 MAGEB5Q9BZ81 275 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 KLK15Q9H2R5 256 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 ARNT2Q9HBZ2 717 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 GBA2Q9HCG7 927 aaPredicted RBP5.17□□□□□ -1.58
ITGB1-214ENST00000488427 DNMT3BQ9UBC3 853 aaKnown RBP5.17□□□□□ -1.58
ITGB1-214ENST00000488427 DKK3Q9UBP4 350 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 DNAJB11Q9UBS4 358 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 GABRQQ9UN88 632 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 ADAMTS5Q9UNA0 930 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 CEP83Q9Y592 693 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 NEO1Q92859 1461 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 SALL3Q9BXA9 1300 aa5.17□□□□□ -1.58
ITGB1-214ENST00000488427 ABCA9Q8IUA7 1624 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 ZNF142P52746 1687 aaPredicted RBP5.16□□□□□ -1.58
ITGB1-214ENST00000488427 POM121BA6NF01 834 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 VWC2LB2RUY7 222 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 AREL1O15033 823 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 TMPRSS11DO60235 418 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 IGLV2-14P01704 120 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 PDHA1P08559 390 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 STT3AP46977 705 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 GATMP50440 423 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 ZNF543Q08ER8 600 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 STK3Q13188 491 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 NPY5RQ15761 445 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 ZNF750Q32MQ0 723 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 ZIK1Q3SY52 487 aaPredicted RBP5.16□□□□□ -1.58
ITGB1-214ENST00000488427 SYCE2Q6PIF2 218 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 Q6ZWC4 215 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 KRT28Q7Z3Y7 464 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 DAZAP1Q96EP5 407 aaKnown RBP5.16□□□□□ -1.58
ITGB1-214ENST00000488427 ZDHHC12Q96GR4 267 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 VPS50Q96JG6 964 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 FSD1LQ9BXM9 530 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 DUSP22Q9NRW4 184 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 ASB6Q9NWX5 421 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 TMOD4Q9NZQ9 345 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 NKX1-2Q9UD57 310 aaPredicted RBP5.16□□□□□ -1.58
ITGB1-214ENST00000488427 AMFRQ9UKV5 643 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 CAPN11Q9UMQ6 739 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 ST3GAL5Q9UNP4 418 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 DRG1Q9Y295 367 aaKnown RBP5.16□□□□□ -1.58
ITGB1-214ENST00000488427 SNX14Q9Y5W7 946 aa5.16□□□□□ -1.58
ITGB1-214ENST00000488427 ZMYM4Q5VZL5 1548 aa5.15□□□□□ -1.58
ITGB1-214ENST00000488427 UBE2Q2LH0YL09 131 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 APOL1O14791 398 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 CCNT2O60583 730 aaKnown RBP5.15□□□□□ -1.59
ITGB1-214ENST00000488427 HNRNPCP07910 306 aaKnown RBP eCLIP5.15□□□□□ -1.59
ITGB1-214ENST00000488427 IL1R1P14778 569 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 ENGP17813 658 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 BTF3P20290 206 aaKnown RBP5.15□□□□□ -1.59
ITGB1-214ENST00000488427 ADORA2AP29274 412 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 UQCRC1P31930 480 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 CASP5P51878 434 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 TIAL1Q01085 375 aaKnown RBP eCLIP5.15□□□□□ -1.59
ITGB1-214ENST00000488427 NHLH1Q02575 133 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 CLCA4Q14CN2 919 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 CERKLQ49MI3 558 aaPredicted RBP5.15□□□□□ -1.59
ITGB1-214ENST00000488427 PLAG1Q6DJT9 500 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 ZDHHC24Q6UX98 284 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 CATSPERGQ6ZRH7 1159 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 NOL8Q76FK4 1167 aaKnown RBP5.15□□□□□ -1.59
ITGB1-214ENST00000488427 SFTPA1Q8IWL2 248 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 TMEM171Q8WVE6 324 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 BRI3BPQ8WY22 251 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 BBC3Q96PG8 261 aaPredicted RBP5.15□□□□□ -1.59
ITGB1-214ENST00000488427 ZBTB26Q9HCK0 441 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 DLL3Q9NYJ7 618 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 ARPP21Q9UBL0 812 aaPredicted RBP5.15□□□□□ -1.59
ITGB1-214ENST00000488427 DKK4Q9UBT3 224 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 STEAP1Q9UHE8 339 aa5.15□□□□□ -1.59
ITGB1-214ENST00000488427 CDK12Q9NYV4 1490 aaPredicted RBP5.14□□□□□ -1.59
ITGB1-214ENST00000488427 H0YIZ8 118 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 KPNA5O15131 536 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 COQ9O75208 318 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 IFIT2P09913 472 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms