RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 LLGL1Q15334 1064 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 PCID2Q5JVF3 399 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 DCAF12L1Q5VU92 463 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 Q6ZWC4 215 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 PARS2Q7L3T8 475 aaKnown RBP5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 ABRAQ8N0Z2 381 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 BPIFB1Q8TDL5 484 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 A1CFQ9NQ94 594 aaKnown RBP5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 G3BP2Q9UN86 482 aaKnown RBP5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 GABRQQ9UN88 632 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 ADAMTS5Q9UNA0 930 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 SNX14Q9Y5W7 946 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 CCNB3Q8WWL7 1395 aa5.66□□□□□ -1.5
SMARCC1-207ENST00000485833 BCL9LQ86UU0 1499 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 FYCO1Q9BQS8 1478 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 BRWD3Q6RI45 1802 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 ASXL1Q8IXJ9 1541 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 MBD3L4A6NDZ8 208 aaPredicted RBP5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 MBD3L3A6NE82 208 aaPredicted RBP5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 ISM1B1AKI9 464 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 BRAFP15056 766 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 SUMO3P55854 103 aaPredicted RBP5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 RBM6P78332 1123 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 PROSER3Q2NL68 480 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 TMEM119Q4V9L6 283 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 KIAA1614Q5VZ46 1190 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 ZNF782Q6ZMW2 699 aaPredicted RBP5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 DEFB132Q7Z7B7 95 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 MICU3Q86XE3 530 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 IZUMO1Q8IYV9 350 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 MYO1HQ8N1T3 1032 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 STK32BQ9NY57 414 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 FLRT1Q9NZU1 646 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 CPNE7Q9UBL6 633 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 DDX20Q9UHI6 824 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 CCNL1Q9UK58 526 aaPredicted RBP5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 TPCN1Q9ULQ1 816 aa5.65□□□□□ -1.5
SMARCC1-207ENST00000485833 EFCAB6Q5THR3 1501 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 TRIM43BA6NCK2 446 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 DLDP09622 509 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 KLRC1P26715 233 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 CTGFP29279 349 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 CYP4F2P78329 520 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 CERCAMQ5T4B2 595 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 NAPRTQ6XQN6 538 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 BRINP3Q76B58 766 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 SRGAP1Q7Z6B7 1085 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 OR56A3Q8NH54 315 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 LRTOMTQ8WZ04 291 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 DDB2Q92466 427 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 SPSB4Q96A44 273 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 TRIM43Q96BQ3 446 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 NMD3Q96D46 503 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 PPP1R9BQ96SB3 815 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 XPNPEP3Q9NQH7 507 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 AFF4Q9UHB7 1163 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 PNPLA6Q8IY17 1366 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 EEA1Q15075 1411 aa5.64□□□□□ -1.51
SMARCC1-207ENST00000485833 EIF2AK4Q9P2K8 1649 aaKnown RBP5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 GOLGA6CA6NDK9 693 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 GOLGA6BA6NDN3 693 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 VSTM5A8MXK1 200 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 PRKCBP05771 671 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 CELA2AP08217 269 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 GOLGA6DP0CG33 693 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 LMO1P25800 156 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 ABCG1P45844 678 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 GRM1Q13255 1194 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 POLD3Q15054 466 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 CNGA2Q16280 664 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 LY6KQ17RY6 165 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 TBC1D25Q3MII6 688 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 RNF220Q5VTB9 566 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 SLC9A4Q6AI14 798 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 MTHFD1LQ6UB35 978 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 ZDHHC24Q6UX98 284 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 CCDC149Q6ZUS6 474 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 CAND1Q86VP6 1230 aaKnown RBP5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 SPARTQ8N0X7 666 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 ABHD11Q8NFV4 315 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 TMEM171Q8WVE6 324 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 PPP2R3CQ969Q6 453 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 DPCDQ9BVM2 203 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 LRRC27Q9C0I9 530 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 SACM1LQ9NTJ5 587 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 GOLGA6AQ9NYA3 693 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 CDY1Q9Y6F8 540 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 ATRNO75882 1429 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 SETD5Q9C0A6 1442 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 ADGRB3O60242 1522 aa5.63□□□□□ -1.51
SMARCC1-207ENST00000485833 PYCARD-AS1I3L0S3 204 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 INO80B-WBP1J3KQ70 363 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 SMIM22K7EJ46 135 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 TPP1O14773 563 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 CCP110O43303 1012 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 VNN1O95497 513 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 LATS1O95835 1130 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 ZBED1O96006 694 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 HRGP04196 525 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 NHLRC4P0CG21 123 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms