RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 NTSR2O95665 410 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 ESRRBO95718 433 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 NR2F6P10588 404 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 JUPP14923 745 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 RBL1P28749 1068 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 FOXO1Q12778 655 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 CYP1B1Q16678 543 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 NBPF8Q3BBV2 869 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 TEDDM1Q5T9Z0 273 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 DPY19L3Q6ZPD9 716 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 STT3BQ8TCJ2 826 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 RSPRY1Q96DX4 576 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 WDYHV1Q96HA8 205 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 PRPF18Q99633 342 aaKnown RBP6.69□□□□□ -1.34
SF3B1-210ENST00000482158 KATNAL1Q9BW62 490 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 FSCN3Q9NQT6 498 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 GABRQQ9UN88 632 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 SH2B3Q9UQQ2 575 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 EXOC5O00471 708 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 GLP2RO95838 553 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 ZFXP17010 805 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-210ENST00000482158 ITPKBP27987 946 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 PNLIPRP1P54315 467 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 TAP1Q03518 808 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 MTAPQ13126 283 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 MPP3Q13368 585 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 BMPR2Q13873 1038 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 CLCA4Q14CN2 919 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 ACOX1Q15067 660 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 TRIM71Q2Q1W2 868 aaKnown RBP6.68□□□□□ -1.34
SF3B1-210ENST00000482158 ZXDCQ2QGD7 858 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-210ENST00000482158 KAZNQ674X7 775 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 JMJD6Q6NYC1 403 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-210ENST00000482158 LDHAL6AQ6ZMR3 332 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 ABHD5Q8WTS1 349 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 SORBS1Q9BX66 1292 aaKnown RBP6.68□□□□□ -1.34
SF3B1-210ENST00000482158 EPS8L2Q9H6S3 715 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 ALG13Q9NP73 1137 aaKnown RBP6.68□□□□□ -1.34
SF3B1-210ENST00000482158 FOXJ2Q9P0K8 574 aa6.68□□□□□ -1.34
SF3B1-210ENST00000482158 SPRY2O43597 315 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 SNX2O60749 519 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 USP1O94782 785 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 ONECUT2O95948 504 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 VIPP01282 170 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 ANXA6P08133 673 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 SRGAP2BP0DMP2 458 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 PUM1Q14671 1186 aaKnown RBP eCLIP6.67□□□□□ -1.34
SF3B1-210ENST00000482158 ZRSR2Q15696 482 aaKnown RBP6.67□□□□□ -1.34
SF3B1-210ENST00000482158 USP51Q70EK9 711 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 PEG10Q86TG7 708 aaKnown RBP6.67□□□□□ -1.34
SF3B1-210ENST00000482158 RASGRP3Q8IV61 690 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 XAGE5Q8WWM1 108 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 PDLIM2Q96JY6 352 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 PRR25Q96S07 402 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 TMEM120AQ9BXJ8 343 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 CYP4F11Q9HBI6 524 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 TRIM36Q9NQ86 728 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 HELLSQ9NRZ9 838 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 SERTAD4Q9NUC0 356 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 LPAR3Q9UBY5 353 aa6.67□□□□□ -1.34
SF3B1-210ENST00000482158 J3KTA2 159 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 PMPCBO75439 489 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 TAF5LO75529 589 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 NXPH3O95157 252 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 ADH4P08319 380 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 CTGFP29279 349 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 GKP32189 559 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 GRM4Q14833 912 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 PRR16Q569H4 304 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 TANGO2Q6ICL3 276 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 GGNQ86UU5 652 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 GRAMD1AQ96CP6 724 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 ZCWPW1Q9H0M4 648 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 MYLK2Q9H1R3 596 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 TP63Q9H3D4 680 aaPredicted RBP6.66□□□□□ -1.34
SF3B1-210ENST00000482158 ARHGEF3Q9NR81 526 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 DLL3Q9NYJ7 618 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 LUZP4Q9P127 313 aa6.66□□□□□ -1.34
SF3B1-210ENST00000482158 IPO5O00410 1097 aaKnown RBP6.65□□□□□ -1.34
SF3B1-210ENST00000482158 ZSCAN9O15535 394 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-210ENST00000482158 DNPH1O43598 174 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 WDR47O94967 919 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 TJP3O95049 919 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 GYS1P13807 737 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 TACR2P21452 398 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 YY1P25490 414 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 KLRK1P26718 216 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 MCM5P33992 734 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 MCM7P33993 719 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 PBX1P40424 430 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 GRIA3P42263 894 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 AVPR1BP47901 424 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 MTHFSP49914 203 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 MRPS35P82673 323 aaKnown RBP6.65□□□□□ -1.34
SF3B1-210ENST00000482158 POSTNQ15063 836 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 TMEM95Q3KNT9 176 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 HECTD2Q5U5R9 776 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 SULT6B1Q6IMI4 303 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 GRHL2Q6ISB3 625 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms