RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.82■□□□□ 0.44
SCAF11-206ENST00000474828 IFNKQ9P0W0 207 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 LSM8O95777 96 aaKnown RBP17.81■□□□□ 0.44
SCAF11-206ENST00000474828 CHRNB2P17787 502 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 HDCP19113 662 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 AVPR1AP37288 418 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 VIPR2P41587 438 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 ACADSBP45954 432 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 DAOAP59103 153 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 ZXDBP98169 803 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 CDR2Q01850 454 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 PDCLQ13371 301 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 HECTD3Q5T447 861 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 GAS2L3Q86XJ1 694 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 ARHGAP18Q8N392 663 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 OLIG1Q8TAK6 271 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 SPAG5Q96R06 1193 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 CYP2S1Q96SQ9 504 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 XPO4Q9C0E2 1151 aaKnown RBP17.81■□□□□ 0.44
SCAF11-206ENST00000474828 SLITRK6Q9H5Y7 841 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 EPHX3Q9H6B9 360 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 LRRC4Q9HBW1 653 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 AIPL1Q9NZN9 384 aa17.81■□□□□ 0.44
SCAF11-206ENST00000474828 HEPACAM2A8MVW5 462 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 COCHO43405 550 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 FBXO21O94952 628 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 PSMC3P17980 439 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 PRKCIP41743 596 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 ADIGQ0VDE8 80 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 USP4Q13107 963 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 ZNF77Q15935 545 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 ARL14EPQ8N8R7 260 aaPredicted RBP17.8■□□□□ 0.44
SCAF11-206ENST00000474828 RNF214Q8ND24 703 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 RIN3Q8TB24 985 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 PCMTD1Q96MG8 357 aaPredicted RBP17.8■□□□□ 0.44
SCAF11-206ENST00000474828 KXD1Q9BQD3 176 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 ULBP1Q9BZM6 244 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 CCL26Q9Y258 94 aa17.8■□□□□ 0.44
SCAF11-206ENST00000474828 COL4A2P08572 1712 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 A0A1W2PQH9 124 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 CHADO15335 359 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 TLR5O60602 858 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 GFPT2O94808 682 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 CYP1A1P04798 512 aaPredicted RBP17.79■□□□□ 0.44
SCAF11-206ENST00000474828 KRT9P35527 623 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 GABRB2P47870 512 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 MLLT6P55198 1093 aaPredicted RBP17.79■□□□□ 0.44
SCAF11-206ENST00000474828 FMO1Q01740 532 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 ARID5BQ14865 1188 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 SYN2Q92777 582 aaPredicted RBP17.79■□□□□ 0.44
SCAF11-206ENST00000474828 CDK5RAP1Q96SZ6 601 aaKnown RBP17.79■□□□□ 0.44
SCAF11-206ENST00000474828 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 RBSNQ9H1K0 784 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 CCSER2Q9H7U1 834 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 WNT16Q9UBV4 365 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 CAPN11Q9UMQ6 739 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 MYO10Q9HD67 2058 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 MYH10P35580 1976 aa17.79■□□□□ 0.44
SCAF11-206ENST00000474828 YJEFN3A6XGL0 299 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 E7ENQ6 273 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 PAPSS1O43252 624 aaPredicted RBP17.78■□□□□ 0.44
SCAF11-206ENST00000474828 SART1O43290 800 aaKnown RBP17.78■□□□□ 0.44
SCAF11-206ENST00000474828 AP5Z1O43299 807 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 CBFA2T2O43439 604 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 NARSO43776 548 aaKnown RBP17.78■□□□□ 0.44
SCAF11-206ENST00000474828 CKMP06732 381 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 TPM3P06753 285 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 FERP16591 822 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 RGS7P49802 495 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 NOMO3P69849 1222 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 GPC5P78333 572 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 IFRD2Q12894 506 aaPredicted RBP17.78■□□□□ 0.44
SCAF11-206ENST00000474828 CACNA2D4Q7Z3S7 1137 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 SIX6OS1Q8N1H7 587 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 TMEM35BQ8NCS4 154 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 BPIFB1Q8TDL5 484 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 DNASE1L2Q92874 299 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 ASIC4Q96FT7 647 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 CPXM1Q96SM3 734 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 FAM83CQ9BQN1 747 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 TRMT61BQ9BVS5 477 aaKnown RBP17.78■□□□□ 0.44
SCAF11-206ENST00000474828 SMOC2Q9H3U7 446 aa17.78■□□□□ 0.44
SCAF11-206ENST00000474828 HELZP42694 1942 aaKnown RBP17.77■□□□□ 0.44
SCAF11-206ENST00000474828 GREM1O60565 184 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 FYNP06241 537 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 GLI1P08151 1106 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 MMEP08473 750 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 CCDC172P0C7W6 258 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 UNGP13051 313 aaPredicted RBP17.77■□□□□ 0.44
SCAF11-206ENST00000474828 RARGP13631 454 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 SCNN1AP37088 669 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 YWHAGP61981 247 aaKnown RBP eCLIP17.77■□□□□ 0.44
SCAF11-206ENST00000474828 PLCB2Q00722 1185 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 SIGLEC14Q08ET2 396 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 ARHGAP29Q52LW3 1261 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 BSPRYQ5W0U4 402 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 MSANTD2Q6P1R3 559 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 TRIM72Q6ZMU5 477 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 TADA2BQ86TJ2 420 aa17.77■□□□□ 0.44
SCAF11-206ENST00000474828 SLC20A1Q8WUM9 679 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms