RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.38□□□□□ -1.23
LIMD1-204ENST00000474665 USP3Q9Y6I4 520 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 FRYQ5TBA9 3013 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 NCANO14594 1321 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 CLUHO75153 1309 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 FAM170AA1A519 330 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 SRRM3A6NNA2 597 aaPredicted RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 TAF4O00268 1085 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 TRIM66O15016 1216 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 THAP12O43422 761 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 XYLBO75191 536 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 MMEP08473 750 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 PLEKP08567 350 aaPredicted RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 ZDHHC11BP0C7U3 371 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 SRGAP2BP0DMP2 458 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 CEBPBP17676 345 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 PTPN2P17706 415 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 CASP14P31944 242 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 CDH5P33151 784 aaPredicted RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 STAT1P42224 750 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 PLA2G4AP47712 749 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 SLC5A3P53794 718 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 BCAT1P54687 386 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 FMO1Q01740 532 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 CDR2Q01850 454 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 ARID5AQ03989 594 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 PTK2Q05397 1052 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 PLD1Q13393 1074 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 ARID5BQ14865 1188 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 PABPC1LQ4VXU2 614 aaKnown RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 SOWAHCQ53LP3 525 aaPredicted RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 ATAT1Q5SQI0 421 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 TAF3Q5VWG9 929 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 SPECC1LQ69YQ0 1117 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 WDR59Q6PJI9 974 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 UNQ6494/PRO21346Q6UXR6 183 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 CYP26C1Q6V0L0 522 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 DENND5BQ6ZUT9 1274 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 SCD5Q86SK9 330 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 PASD1Q8IV76 773 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 C1orf210Q8IVY1 113 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 NPAS3Q8IXF0 933 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 MAML2Q8IZL2 1156 aaPredicted RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 ST13P5Q8NFI4 369 aaPredicted RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 CPLX3Q8WVH0 158 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 ING5Q8WYH8 240 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 NDRG1Q92597 394 aaKnown RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 TRMT2BQ96GJ1 504 aaKnown RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 MRFAP1L1Q96HT8 127 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 CEP295NLQ96MC4 621 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 ZNF512Q96ME7 567 aaPredicted RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 SPAG5Q96R06 1193 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 SLC22A12Q96S37 553 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 ANP32EQ9BTT0 268 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 SLC4A5Q9BY07 1137 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 UBXN6Q9BZV1 441 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 TRIM5Q9C035 493 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 LHX5Q9H2C1 402 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 OSER1Q9NX31 292 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 MYO6Q9UM54 1294 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 ASB3Q9Y575 518 aa7.37□□□□□ -1.23
LIMD1-204ENST00000474665 MYO18AQ92614 2054 aaKnown RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 HELZP42694 1942 aaKnown RBP7.37□□□□□ -1.23
LIMD1-204ENST00000474665 NUP210Q8TEM1 1887 aaPredicted RBP7.36□□□□□ -1.23
LIMD1-204ENST00000474665 ZZEF1O43149 2961 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 ATP8B3O60423 1300 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 FANCMQ8IYD8 2048 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 A0A1W2PRU2 124 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 KRBA1A5PL33 1030 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 ZNF840PA6NDX5 716 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 M0QYV0 167 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 PIK3R2O00459 728 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 XPO1O14980 1071 aaKnown RBP7.36□□□□□ -1.23
LIMD1-204ENST00000474665 CBFA2T2O43439 604 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 ADCY5O95622 1261 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 CYP1A1P04798 512 aaPredicted RBP7.36□□□□□ -1.23
LIMD1-204ENST00000474665 SETSIPP0DME0 302 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 CSH1P0DML2 217 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 CSH2P0DML3 217 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 SKILP12757 684 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 MYL4P12829 197 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 FSHRP23945 695 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 GABRR2P28476 465 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 HNRNPH3P31942 346 aaKnown RBP7.36□□□□□ -1.23
LIMD1-204ENST00000474665 PRKCIP41743 596 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 MTHFRP42898 656 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 RGS7P49802 495 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 BPIFB4P59827 614 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 ZBED6P86452 979 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 ZXDBP98169 803 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 PLCB2Q00722 1185 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 BST2Q10589 180 aaKnown RBP7.36□□□□□ -1.23
LIMD1-204ENST00000474665 TAF10Q12962 218 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 STILQ15468 1287 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 TEAD2Q15562 447 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 MEA1Q16626 185 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 PTPN20Q4JDL3 420 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 PM20D1Q6GTS8 502 aa7.36□□□□□ -1.23
LIMD1-204ENST00000474665 CES5AQ6NT32 575 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms