RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ACVR2BQ13705 512 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 PPP2R5AQ15172 486 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 SAFBQ15424 915 aaKnown RBP eCLIP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 CCL14Q16627 93 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 ADCK5Q3MIX3 580 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 C19orf54Q5BKX5 351 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 MAMDC4Q6UXC1 1216 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 FBXL16Q8N461 479 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 GPR156Q8NFN8 814 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 OR14K1Q8NGZ2 314 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 FEZF2Q8TBJ5 459 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 SNX33Q8WV41 574 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 RIN2Q8WYP3 895 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 USP6NLQ92738 828 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 GCDHQ92947 438 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 ZNF274Q96GC6 653 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 ZSCAN31Q96LW9 406 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 TCEANC2Q96MN5 208 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 UPF3BQ9BZI7 483 aaKnown RBP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 SLC6A15Q9H2J7 730 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 C11orf49Q9H6J7 331 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 JADE2Q9NQC1 790 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 RIPK3Q9Y572 518 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 MROH7Q68CQ1 1323 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 DNM1LO00429 736 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 MTSS1O43312 755 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 EIF3JO75822 258 aaKnown RBP7.01□□□□□ -1.29
PTCD3-208ENST00000469585 CABYRO75952 493 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 TOX4O94842 621 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 DEXIO95424 95 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 HSP90AA1P07900 732 aaKnown RBP7.01□□□□□ -1.29
PTCD3-208ENST00000469585 VSIG10L2P0DP72 767 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 MYCLP12524 364 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-208ENST00000469585 CYBAP13498 195 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 SCG2P13521 617 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 WASP42768 502 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 NLRP5P59047 1200 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 ATP2C1P98194 919 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-208ENST00000469585 STK3Q13188 491 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 ACAP1Q15027 740 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 RABEP1Q15276 862 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 XRRA1Q6P2D8 792 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 RAB11FIP4Q86YS3 637 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 FAM184AQ8NB25 1140 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 GIMAP8Q8ND71 665 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-208ENST00000469585 TNPO1Q92973 898 aaKnown RBP7.01□□□□□ -1.29
PTCD3-208ENST00000469585 GLT1D1Q96MS3 346 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 SLC26A6Q9BXS9 759 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 RNF26Q9BY78 433 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-208ENST00000469585 SEZ6LQ9BYH1 1024 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 XYLT2Q9H1B5 865 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 CPVLQ9H3G5 476 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 RBM12Q9NTZ6 932 aaKnown RBP7.01□□□□□ -1.29
PTCD3-208ENST00000469585 ING3Q9NXR8 418 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 PNMA8BQ9ULN7 279 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-208ENST00000469585 NR2E1Q9Y466 385 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 PCNTO95613 3336 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 MYH6P13533 1939 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 ZNF536O15090 1300 aa7.01□□□□□ -1.29
PTCD3-208ENST00000469585 PARP14Q460N5 1801 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 SMCO2A6NFE2 343 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 MARCH6O60337 910 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 DUSP11O75319 330 aaKnown RBP7□□□□□ -1.29
PTCD3-208ENST00000469585 ALDH1A2O94788 518 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 PLEKHA8P1O95397 391 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 TXNP10599 105 aaKnown RBP7□□□□□ -1.29
PTCD3-208ENST00000469585 EN2P19622 333 aaPredicted RBP7□□□□□ -1.29
PTCD3-208ENST00000469585 EDNRBP24530 442 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 CCND3P30281 292 aaPredicted RBP7□□□□□ -1.29
PTCD3-208ENST00000469585 CNTN2Q02246 1040 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 ZNF568Q3ZCX4 644 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 MAP3K21Q5TCX8 1036 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 GALNT17Q6IS24 598 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 SLC30A10Q6XR72 485 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 SEPT14Q6ZU15 432 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 RASGRP2Q7LDG7 609 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 TLK2Q86UE8 772 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 FMNL3Q8IVF7 1028 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 CHPFQ8IZ52 775 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 ZDHHC14Q8IZN3 488 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 SRBD1Q8N5C6 995 aaKnown RBP7□□□□□ -1.29
PTCD3-208ENST00000469585 FAM133AQ8N9E0 248 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 OR6J1Q8NGC5 347 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 OR2I1PQ8NGU4 316 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 NRG4Q8WWG1 115 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 HOXB13Q92826 284 aaPredicted RBP7□□□□□ -1.29
PTCD3-208ENST00000469585 NAP1L4Q99733 375 aaKnown RBP7□□□□□ -1.29
PTCD3-208ENST00000469585 LBHD1Q9BQE6 289 aaPredicted RBP7□□□□□ -1.29
PTCD3-208ENST00000469585 ADI1Q9BV57 179 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 KATNAL1Q9BW62 490 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 WDR11Q9BZH6 1224 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 MLXIPQ9HAP2 919 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 GOLGA2P5Q9HBQ8 144 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 SH3GLB2Q9NR46 395 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 LIMCH1Q9UPQ0 1083 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 Q9Y3F1 56 aa7□□□□□ -1.29
PTCD3-208ENST00000469585 PMS2P1A4D2B8 440 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 OTOL1A6NHN0 477 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 PRPF3O43395 683 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms