RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 VEGFBP49765 207 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 IFI35P80217 286 aaPredicted RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 TSPY1Q01534 308 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 ROR1Q01973 937 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 LMNB2Q03252 620 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 AP1B1Q10567 949 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 SLMAPQ14BN4 828 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 CCDC14Q49A88 953 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 HFE2Q6ZVN8 426 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 UNC45BQ8IWX7 931 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 FUKQ8N0W3 1084 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 ARFGAP1Q8N6T3 406 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 ZNF296Q8WUU4 475 aaPredicted RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 KBTBD7Q8WVZ9 684 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 EXOC4Q96A65 974 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 PCED1BQ96HM7 432 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 PEBP4Q96S96 227 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 TRAIPQ9BWF2 469 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 PABPC3Q9H361 631 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 PRDM5Q9NQX1 630 aaPredicted RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 GRHL1Q9NZI5 618 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 AP4E1Q9UPM8 1137 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 NAALADL1Q9UQQ1 740 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 PARP14Q460N5 1801 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 LIASO43766 372 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 HOXD8P13378 290 aaPredicted RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 ITIH2P19823 946 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 CTCFP49711 727 aaPredicted RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 GATMP50440 423 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 GDF10P55107 478 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 YWHAZP63104 245 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 TFDP2Q14188 446 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 LPIN1Q14693 890 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 ZDHHC24Q6UX98 284 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 SRRM1Q8IYB3 904 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 DBF4BQ8NFT6 615 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 CCDC110Q8TBZ0 833 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 PGBD4Q96DM1 585 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 CFAP36Q96G28 342 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 IKBKGQ9Y6K9 419 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 LCTP09848 1927 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 RBBP6Q7Z6E9 1792 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 LOXHD1Q8IVV2 1947 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 EXOC1LA0A1B0GW35 172 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 C2CD4BA6NLJ0 364 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 PIRO00625 290 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 APOL1O14791 398 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 CPB1P15086 417 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 NPR3P17342 541 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 ECHS1P30084 290 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 VCPP55072 806 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 POU5F1Q01860 360 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 GAD2Q05329 585 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 RNF187Q5TA31 235 aaPredicted RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 CPLX4Q7Z7G2 160 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 SPATA2LQ8IUW3 424 aaPredicted RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 C10orf67Q8IYJ2 551 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 THEM5Q8N1Q8 247 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 GDAP1Q8TB36 358 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 PYROXD1Q8WU10 500 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 RUNDC3BQ96NL0 473 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 TMEM209Q96SK2 561 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 PTCH2Q9Y6C5 1203 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 PCSK1P29120 753 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 ADAM17P78536 824 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 INCA1Q0VD86 236 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 SIX1Q15475 284 aaPredicted RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 SYPL2Q5VXT5 272 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 TRNP1Q6NT89 227 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 KDELC2Q7Z4H8 507 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 UNC93AQ86WB7 457 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 ZNF280BQ86YH2 543 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 DEPDC1BQ8WUY9 529 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 CHMP2BQ9UQN3 213 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 Q9Y3F1 56 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 SNX10Q9Y5X0 201 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 GRIN2DO15399 1336 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 GOLGA8RI6L899 631 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 ADAMTS4O75173 837 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 MAGEA4P43358 317 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 GTF2A1P52655 376 aaPredicted RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 HNRNPH2P55795 449 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 FASTKD3Q14CZ7 662 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 MTFR1Q15390 333 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 ZKSCAN8Q15776 578 aaPredicted RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 TAF12Q16514 161 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 BOLA3Q53S33 107 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 KIAA1841Q6NSI8 718 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 CCDC185Q8N715 623 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 SCAMP5Q8TAC9 235 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 CXorf38Q8TB03 319 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 SLC35F5Q8WV83 523 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 MCRS1Q96EZ8 462 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 THOC1Q96FV9 657 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 WDR90Q96KV7 1748 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 KLF6Q99612 283 aaPredicted RBP9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 NACA2Q9H009 215 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 HCSTQ9UBK5 93 aa9.75□□□□□ -0.85
NUDCD3-203ENST00000460110 STAP1Q9ULZ2 295 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 681.4 ms