RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TRIM36Q9NQ86 728 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 IP6K2Q9UHH9 426 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 RGS10O43665 173 aa5.81□□□□□ -1.48
LINC01040-201ENST00000425048 PF4V1P10720 104 aa5.81□□□□□ -1.48
LINC01040-201ENST00000425048 NPR1P16066 1061 aa5.81□□□□□ -1.48
LINC01040-201ENST00000425048 NCLP19338 710 aaKnown RBP5.81□□□□□ -1.48
LINC01040-201ENST00000425048 CDKN2AP42771 156 aaKnown RBP5.81□□□□□ -1.48
LINC01040-201ENST00000425048 INSCQ1MX18 579 aa5.81□□□□□ -1.48
LINC01040-201ENST00000425048 ZNF750Q32MQ0 723 aa5.81□□□□□ -1.48
LINC01040-201ENST00000425048 IFIT1BQ5T764 474 aaKnown RBP5.81□□□□□ -1.48
LINC01040-201ENST00000425048 DIS3LQ8TF46 1054 aaKnown RBP5.81□□□□□ -1.48
LINC01040-201ENST00000425048 HOMER2Q9NSB8 354 aa5.81□□□□□ -1.48
LINC01040-201ENST00000425048 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.81□□□□□ -1.48
LINC01040-201ENST00000425048 CDY1Q9Y6F8 540 aa5.81□□□□□ -1.48
LINC01040-201ENST00000425048 TMEM233B4DJY2 109 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 SRGAP2O75044 1071 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 T-ENOLP0DO92 83 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 HTR1BP28222 390 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 MTX1Q13505 466 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 UBAP2Q5T6F2 1119 aaKnown RBP5.8□□□□□ -1.48
LINC01040-201ENST00000425048 DCAF12L1Q5VU92 463 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 ZNF549Q6P9A3 640 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 DENND1CQ8IV53 801 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 MMP21Q8N119 569 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 C12orf76Q8N812 135 aaPredicted RBP5.8□□□□□ -1.48
LINC01040-201ENST00000425048 PPP1R9BQ96SB3 815 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 ZNF518BQ9C0D4 1074 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 SLC12A5Q9H2X9 1139 aa5.8□□□□□ -1.48
LINC01040-201ENST00000425048 A1CFQ9NQ94 594 aaKnown RBP5.8□□□□□ -1.48
LINC01040-201ENST00000425048 H3BML4 177 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 AP1G1O43747 822 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 RASAL1O95294 804 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 KITP10721 976 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 TACR3P29371 465 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 CPA2P48052 419 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 YPEL5P62699 121 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 ZNF267Q14586 743 aaPredicted RBP5.79□□□□□ -1.48
LINC01040-201ENST00000425048 MFSD13AQ14CX5 517 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 PFKFB3Q16875 520 aaPredicted RBP5.79□□□□□ -1.48
LINC01040-201ENST00000425048 FAM110CQ1W6H9 321 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 ZDHHC24Q6UX98 284 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 ZBTB45Q96K62 511 aaPredicted RBP5.79□□□□□ -1.48
LINC01040-201ENST00000425048 MLXIPQ9HAP2 919 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 SMURF2Q9HAU4 748 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 AASDHPPTQ9NRN7 309 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 PAXBP1Q9Y5B6 917 aa5.79□□□□□ -1.48
LINC01040-201ENST00000425048 UBXN7O94888 489 aa5.78□□□□□ -1.48
LINC01040-201ENST00000425048 CD63P08962 238 aa5.78□□□□□ -1.48
LINC01040-201ENST00000425048 CT47B1P0C2W7 299 aaPredicted RBP5.78□□□□□ -1.48
LINC01040-201ENST00000425048 TIAL1Q01085 375 aaKnown RBP eCLIP5.78□□□□□ -1.48
LINC01040-201ENST00000425048 BRDTQ58F21 947 aaPredicted RBP5.78□□□□□ -1.48
LINC01040-201ENST00000425048 LCE1EQ5T753 118 aa5.78□□□□□ -1.48
LINC01040-201ENST00000425048 CACHD1Q5VU97 1274 aa5.78□□□□□ -1.48
LINC01040-201ENST00000425048 SPSB4Q96A44 273 aa5.78□□□□□ -1.48
LINC01040-201ENST00000425048 HIC2Q96JB3 615 aa5.78□□□□□ -1.48
LINC01040-201ENST00000425048 NT5C1BQ96P26 610 aa5.78□□□□□ -1.48
LINC01040-201ENST00000425048 DNMT3BQ9UBC3 853 aaKnown RBP5.78□□□□□ -1.48
LINC01040-201ENST00000425048 GABBR1Q9UBS5 961 aa5.78□□□□□ -1.48
LINC01040-201ENST00000425048 NKX1-2Q9UD57 310 aaPredicted RBP5.78□□□□□ -1.48
LINC01040-201ENST00000425048 PRSS44E7EML9 344 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 EXOC5O00471 708 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 CD3EAPO15446 510 aaKnown RBP5.77□□□□□ -1.49
LINC01040-201ENST00000425048 PHGDHO43175 533 aaKnown RBP5.77□□□□□ -1.49
LINC01040-201ENST00000425048 CD19P15391 556 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 GATMP50440 423 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 NEK2P51955 445 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 SLC14A1Q13336 389 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 EARS2Q5JPH6 523 aaKnown RBP5.77□□□□□ -1.49
LINC01040-201ENST00000425048 KRT78Q8N1N4 520 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 RBMXL3Q8N7X1 1067 aaKnown RBP5.77□□□□□ -1.49
LINC01040-201ENST00000425048 EDC3Q96F86 508 aaKnown RBP5.77□□□□□ -1.49
LINC01040-201ENST00000425048 CAMK1GQ96NX5 476 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 CTAGE1Q96RT6 745 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 ZMAT3Q9HA38 289 aaKnown RBP5.77□□□□□ -1.49
LINC01040-201ENST00000425048 PCDH12Q9NPG4 1184 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 PROCRQ9UNN8 238 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 CADPSQ9ULU8 1353 aa5.77□□□□□ -1.49
LINC01040-201ENST00000425048 IGLV5-39A0A0G2JS06 123 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 LOC102723971A0A1B0GUV8 181 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 GTPBP1O00178 669 aaKnown RBP5.76□□□□□ -1.49
LINC01040-201ENST00000425048 MARCH6O60337 910 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 EN2P19622 333 aaPredicted RBP5.76□□□□□ -1.49
LINC01040-201ENST00000425048 MANEAQ5SRI9 462 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 KCTD20Q7Z5Y7 419 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 ADHFE1Q8IWW8 467 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 CHPFQ8IZ52 775 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 PELI3Q8N2H9 469 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 WDYHV1Q96HA8 205 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 SEMA4BQ9NPR2 832 aaPredicted RBP5.76□□□□□ -1.49
LINC01040-201ENST00000425048 ZBTB40Q9NUA8 1239 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 COL4A3BPQ9Y5P4 624 aa5.76□□□□□ -1.49
LINC01040-201ENST00000425048 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.75□□□□□ -1.49
LINC01040-201ENST00000425048 EME2A4GXA9 379 aaPredicted RBP5.75□□□□□ -1.49
LINC01040-201ENST00000425048 FYB1O15117 783 aa5.75□□□□□ -1.49
LINC01040-201ENST00000425048 CCP110O43303 1012 aa5.75□□□□□ -1.49
LINC01040-201ENST00000425048 B4GALNT1Q00973 533 aa5.75□□□□□ -1.49
LINC01040-201ENST00000425048 OR56A3Q8NH54 315 aa5.75□□□□□ -1.49
LINC01040-201ENST00000425048 IGFBPL1Q8WX77 278 aa5.75□□□□□ -1.49
LINC01040-201ENST00000425048 HOOK2Q96ED9 719 aa5.75□□□□□ -1.49
LINC01040-201ENST00000425048 KAZALD1Q96I82 304 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms