RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 DUSP15Q9H1R2 295 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-210ENST00000409954 FAM124BQ9H5Z6 455 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-210ENST00000409954 CCSER2Q9H7U1 834 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 TMEM8AQ9HCN3 771 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 KRT82Q9NSB4 513 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 MAPK8IP1Q9UQF2 711 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 SCML2Q9UQR0 700 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 TLR5O60602 858 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 BEST1O76090 585 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 CCDC130P13994 396 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 GCLMP48507 274 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 GOLGA8FQ08AF8 430 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 GOLGA8DPQ0D2H9 430 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 BYSLQ13895 437 aaKnown RBP15.34■□□□□ 0.05
MCF2L-210ENST00000409954 EDRF1Q3B7T1 1238 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 AASDHQ4L235 1098 aaPredicted RBP15.34■□□□□ 0.05
MCF2L-210ENST00000409954 EOGTQ5NDL2 527 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 KRT39Q6A163 491 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 IL31Q6EBC2 164 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 SPOPLQ6IQ16 392 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 RASSF3Q86WH2 238 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 ZNF276Q8N554 614 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 ELMO3Q96BJ8 720 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 ZFRQ96KR1 1074 aaKnown RBP15.34■□□□□ 0.05
MCF2L-210ENST00000409954 GTPBP4Q9BZE4 634 aaKnown RBP15.34■□□□□ 0.05
MCF2L-210ENST00000409954 POLMQ9NP87 494 aaPredicted RBP15.34■□□□□ 0.05
MCF2L-210ENST00000409954 ARHGEF4Q9NR80 690 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 SPHK2Q9NRA0 654 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 GMIPQ9P107 970 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 DEC1Q9P2X7 70 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 PCDHA5Q9Y5H7 936 aa15.34■□□□□ 0.05
MCF2L-210ENST00000409954 ZNF638Q14966 1978 aaKnown RBP15.34■□□□□ 0.05
MCF2L-210ENST00000409954 TBC1D3BA6NDS4 549 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 CETN3O15182 167 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 HOXC11O43248 304 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-210ENST00000409954 GDF9O60383 454 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 PLA2G4AP47712 749 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 PSEN1P49768 467 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 SEC13P55735 322 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 PPP3CAQ08209 521 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 KLHDC10Q6PID8 442 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 CCDC33Q8N5R6 958 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 TAS1R2Q8TE23 839 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 CNOT6LQ96LI5 555 aaKnown RBP15.33■□□□□ 0.04
MCF2L-210ENST00000409954 KLF16Q9BXK1 252 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-210ENST00000409954 UBXN6Q9BZV1 441 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 NIF3L1Q9GZT8 377 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 CYLDQ9NQC7 956 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 FAM49BQ9NUQ9 324 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 RMND1Q9NWS8 449 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 WDR35Q9P2L0 1181 aa15.33■□□□□ 0.04
MCF2L-210ENST00000409954 KIF26AQ9ULI4 1882 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 BCLAF3A2AJT9 711 aaKnown RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 GOLGA6L4A6NEF3 574 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 CILPO75339 1184 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 CAVIN2O95810 425 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 ACO1P21399 889 aaKnown RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 ADORA2BP29275 332 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 GBP1P32455 592 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 TIE1P35590 1138 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 MPLP40238 635 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 KIR2DL1P43626 348 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 SF3A2Q15428 464 aaKnown RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 ZCWPW2Q504Y3 356 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 CLEC20AQ6ZU45 233 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 TRMT11Q7Z4G4 463 aaKnown RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 TADA2BQ86TJ2 420 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 TMEM25Q86YD3 366 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 IL17RCQ8NAC3 791 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 HEXIM2Q96MH2 286 aaKnown RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 XPO6Q96QU8 1125 aaKnown RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 DUSP16Q9BY84 665 aa15.32■□□□□ 0.04
MCF2L-210ENST00000409954 APOBEC3GQ9HC16 384 aaKnown RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 LSM7Q9UK45 103 aaKnown RBP15.32■□□□□ 0.04
MCF2L-210ENST00000409954 HHLA1C9JL84 531 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
MCF2L-210ENST00000409954 TM4SF5O14894 197 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 DCLK1O15075 740 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 KLF8O95600 359 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-210ENST00000409954 TRIM49P0CI25 452 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 TRIM49CP0CI26 452 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 KIF11P52732 1056 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 ORC1Q13415 861 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 ANO4Q32M45 955 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 PPM1JQ5JR12 505 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 EMC10Q5UCC4 262 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 ANO7Q6IWH7 933 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 BBS7Q8IWZ6 715 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 ETFBKMTQ8IXQ9 262 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 ALLCQ8N6M5 410 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 NAT16Q8N8M0 369 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 TXNDC5Q8NBS9 432 aaKnown RBP15.31■□□□□ 0.04
MCF2L-210ENST00000409954 FBXL13Q8NEE6 735 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 OLIG1Q8TAK6 271 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 WHAMMQ8TF30 809 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 GSDMAQ96QA5 445 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 CDK5RAP1Q96SZ6 601 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms