RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CYLDQ9NQC7 956 aa23.53■■□□□ 1.36
PTCD3-203ENST00000409783 ARNTLO00327 626 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 DPYSL4O14531 572 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 SOX5P35711 763 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 PDE6CP51160 858 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 USP4Q13107 963 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 ZNF77Q15935 545 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 IER5LQ5T953 404 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 ZNF276Q8N554 614 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 STK32AQ8WU08 396 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 ZFRQ96KR1 1074 aaKnown RBP23.52■■□□□ 1.36
PTCD3-203ENST00000409783 SLC4A5Q9BY07 1137 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 LHX5Q9H2C1 402 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.52■■□□□ 1.36
PTCD3-203ENST00000409783 TICRRQ7Z2Z1 1910 aa23.52■■□□□ 1.36
PTCD3-203ENST00000409783 TLR5O60602 858 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 GFPT2O94808 682 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 GDI1P31150 447 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 PSEN1P49768 467 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 UBASH3AP57075 661 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 NOP9Q86U38 636 aaKnown RBP23.51■■□□□ 1.35
PTCD3-203ENST00000409783 RNF214Q8ND24 703 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 EPS8L1Q8TE68 723 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 SPAG5Q96R06 1193 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 TTYH3Q9C0H2 523 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 CNGB3Q9NQW8 809 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 CLIC5Q9NZA1 410 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 WNT16Q9UBV4 365 aa23.51■■□□□ 1.35
PTCD3-203ENST00000409783 NOCTQ9UK39 431 aaKnown RBP23.51■■□□□ 1.35
PTCD3-203ENST00000409783 PIK3R2O00459 728 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 CHADO15335 359 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 TBX18O95935 607 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 RARGP13631 454 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 LCP1P13796 627 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 STAT1P42224 750 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 DAOAP59103 153 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 PASD1Q8IV76 773 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 SH3RF2Q8TEC5 729 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 BAP1Q92560 729 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 NAGPAQ9UK23 515 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 CPQQ9Y646 472 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 COL4A3Q01955 1670 aa23.5■■□□□ 1.35
PTCD3-203ENST00000409783 TMEM221A6NGB7 291 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 YJEFN3A6XGL0 299 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 E7ENQ6 273 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 M0R296 226 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 KRT9P35527 623 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 YWHAGP61981 247 aaKnown RBP eCLIP23.49■■□□□ 1.35
PTCD3-203ENST00000409783 PDCLQ13371 301 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 KLHDC10Q6PID8 442 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 TMEM110Q86TL2 294 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 SIX6OS1Q8N1H7 587 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 CLEC4CQ8WTT0 213 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 ZFYVE19Q96K21 471 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 BRD9Q9H8M2 597 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 TRPV5Q9NQA5 729 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 IFNKQ9P0W0 207 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 NUDT5Q9UKK9 219 aa23.49■■□□□ 1.35
PTCD3-203ENST00000409783 KRBA1A5PL33 1030 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 LEFTY2O00292 366 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 ZNF263O14978 683 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 GPR37L1O60883 481 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 MBL2P11226 248 aaPredicted RBP23.48■■□□□ 1.35
PTCD3-203ENST00000409783 CHRNB2P17787 502 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 CDH5P33151 784 aaPredicted RBP23.48■■□□□ 1.35
PTCD3-203ENST00000409783 ARHGAP29Q52LW3 1261 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 HFE2Q6ZVN8 426 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 ARHGAP18Q8N392 663 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 SLC20A1Q8WUM9 679 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 IRGQQ8WZA9 623 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 DNASE1L2Q92874 299 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 IRF7Q92985 503 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 FAM83CQ9BQN1 747 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 SMPD4Q9NXE4 827 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 TJP2Q9UDY2 1190 aa23.48■■□□□ 1.35
PTCD3-203ENST00000409783 FAM86C2PA6NEL3 165 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 E5RJQ4 531 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 MMEP08473 750 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 ATP5C1P36542 298 aaKnown RBP23.47■■□□□ 1.35
PTCD3-203ENST00000409783 ACADSBP45954 432 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 PFKPQ01813 784 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 MTF1Q14872 753 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 FIGNQ5HY92 759 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 TAF3Q5VWG9 929 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 CACNA2D4Q7Z3S7 1137 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 ZNF677Q86XU0 584 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 YAF2Q8IY57 180 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 C1orf131Q8NDD1 294 aaKnown RBP23.47■■□□□ 1.35
PTCD3-203ENST00000409783 WBP2Q969T9 261 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 CPXM1Q96SM3 734 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 KLF16Q9BXK1 252 aaPredicted RBP23.47■■□□□ 1.35
PTCD3-203ENST00000409783 XPO4Q9C0E2 1151 aaKnown RBP23.47■■□□□ 1.35
PTCD3-203ENST00000409783 ST7Q9NRC1 585 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 MYO6Q9UM54 1294 aa23.47■■□□□ 1.35
PTCD3-203ENST00000409783 SHISA7A6NL88 538 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 MDM4O15151 490 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 PAPSS1O43252 624 aaPredicted RBP23.46■■□□□ 1.35
PTCD3-203ENST00000409783 FBXO21O94952 628 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 PDGFBP01127 241 aaPredicted RBP23.46■■□□□ 1.35
PTCD3-203ENST00000409783 RALAP11233 206 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms