RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 DEFB115Q30KQ5 88 aa21.61■■□□□ 1.05
USP39-203ENST00000409470 NPNTQ6UXI9 565 aa21.61■■□□□ 1.05
USP39-203ENST00000409470 C3orf58Q8NDZ4 430 aa21.61■■□□□ 1.05
USP39-203ENST00000409470 CD99L2Q8TCZ2 262 aa21.61■■□□□ 1.05
USP39-203ENST00000409470 ADAM2Q99965 735 aa21.61■■□□□ 1.05
USP39-203ENST00000409470 PCDH18Q9HCL0 1135 aa21.61■■□□□ 1.05
USP39-203ENST00000409470 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.61■■□□□ 1.05
USP39-203ENST00000409470 MDM4O15151 490 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 CABYRO75952 493 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 POMCP01189 267 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 RBP3P10745 1247 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 MDH1P40925 334 aaKnown RBP21.6■■□□□ 1.05
USP39-203ENST00000409470 ACLYP53396 1101 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 KIAA0319Q5VV43 1072 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 REM2Q8IYK8 340 aaPredicted RBP21.6■■□□□ 1.05
USP39-203ENST00000409470 FAM149B1Q96BN6 582 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 SYT15Q9BQS2 421 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 ROPN1BQ9BZX4 212 aaPredicted RBP21.6■■□□□ 1.05
USP39-203ENST00000409470 ROPN1Q9HAT0 212 aaPredicted RBP21.6■■□□□ 1.05
USP39-203ENST00000409470 LRRC4Q9HBW1 653 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 A0A0U1RQF3 1178 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 FAM200BP0CF97 657 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 RDXP35241 583 aaKnown RBP21.6■■□□□ 1.05
USP39-203ENST00000409470 ROR1Q01973 937 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 DSC3Q14574 896 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 CA9Q16790 459 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 ERMARDQ5T6L9 678 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 RNASEH2BQ5TBB1 312 aaKnown RBP21.6■■□□□ 1.05
USP39-203ENST00000409470 DARS2Q6PI48 645 aaKnown RBP21.6■■□□□ 1.05
USP39-203ENST00000409470 C1orf228Q6PIY5 440 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 PAQR9Q6ZVX9 377 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 PCGF5Q86SE9 256 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 UNC45BQ8IWX7 931 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 RAET1EQ8TD07 263 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 PGBD4Q96DM1 585 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 PAAF1Q9BRP4 392 aa21.6■■□□□ 1.05
USP39-203ENST00000409470 C11orf84Q9BUA3 381 aaPredicted RBP21.6■■□□□ 1.05
USP39-203ENST00000409470 STMN4Q9H169 189 aaPredicted RBP21.6■■□□□ 1.05
USP39-203ENST00000409470 APOL1O14791 398 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 TRPA1O75762 1119 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 BEST1O76090 585 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 IVLP07476 585 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 MAGEA4P43358 317 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 PPARDQ03181 441 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 NOMO1Q15155 1222 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 UPP1Q16831 310 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 ANKRD20A8PQ5CZ79 823 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 PPP6R3Q5H9R7 873 aaPredicted RBP21.59■■□□□ 1.05
USP39-203ENST00000409470 MAP3K21Q5TCX8 1036 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 ZC3H18Q86VM9 953 aaKnown RBP21.59■■□□□ 1.05
USP39-203ENST00000409470 RELL1Q8IUW5 271 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 SIX6OS1Q8N1H7 587 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 FAM71DQ8N9W8 422 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 NDRG1Q92597 394 aaKnown RBP21.59■■□□□ 1.05
USP39-203ENST00000409470 CENPIQ92674 756 aaPredicted RBP21.59■■□□□ 1.05
USP39-203ENST00000409470 C9orf72Q96LT7 481 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 SAYSD1Q9NPB0 183 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 CRTAC1Q9NQ79 661 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 KRT82Q9NSB4 513 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 SHOC2Q9UQ13 582 aa21.59■■□□□ 1.05
USP39-203ENST00000409470 AGTP01019 485 aa21.58■■□□□ 1.05
USP39-203ENST00000409470 IL4RP24394 825 aa21.58■■□□□ 1.05
USP39-203ENST00000409470 CTCFP49711 727 aaPredicted RBP21.58■■□□□ 1.05
USP39-203ENST00000409470 ATXN1P54253 815 aaKnown RBP21.58■■□□□ 1.05
USP39-203ENST00000409470 MAP3K7CLP57077 242 aa21.58■■□□□ 1.05
USP39-203ENST00000409470 LONRF1Q17RB8 773 aa21.58■■□□□ 1.05
USP39-203ENST00000409470 CLEC20AQ6ZU45 233 aa21.58■■□□□ 1.05
USP39-203ENST00000409470 INPP5FQ9Y2H2 1132 aa21.58■■□□□ 1.05
USP39-203ENST00000409470 THSD7BQ9C0I4 1608 aa21.58■■□□□ 1.05
USP39-203ENST00000409470 H7C0C1 242 aa21.58■■□□□ 1.04
USP39-203ENST00000409470 MATKP42679 507 aa21.58■■□□□ 1.04
USP39-203ENST00000409470 ATP5OP48047 213 aa21.58■■□□□ 1.04
USP39-203ENST00000409470 MRPS5P82675 430 aaKnown RBP21.58■■□□□ 1.04
USP39-203ENST00000409470 TRIM71Q2Q1W2 868 aaKnown RBP21.58■■□□□ 1.04
USP39-203ENST00000409470 FAM26DQ5JW98 314 aa21.58■■□□□ 1.04
USP39-203ENST00000409470 DEFB106AQ8N104 65 aa21.58■■□□□ 1.04
USP39-203ENST00000409470 KCTD13Q8WZ19 329 aa21.58■■□□□ 1.04
USP39-203ENST00000409470 ZNF670Q9BS34 389 aa21.58■■□□□ 1.04
USP39-203ENST00000409470 DHX35Q9H5Z1 703 aaKnown RBP21.58■■□□□ 1.04
USP39-203ENST00000409470 SKIP12755 728 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 TGM2P21980 687 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 LSP1P33241 339 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 RPL22P35268 128 aaKnown RBP21.57■■□□□ 1.04
USP39-203ENST00000409470 SULT1E1P49888 294 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 HNRNPH2P55795 449 aaKnown RBP21.57■■□□□ 1.04
USP39-203ENST00000409470 BCAR1P56945 870 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 IFI35P80217 286 aaPredicted RBP21.57■■□□□ 1.04
USP39-203ENST00000409470 ADCY1Q08828 1119 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 AUHQ13825 339 aaKnown RBP21.57■■□□□ 1.04
USP39-203ENST00000409470 TIGD5Q53EQ6 642 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 B4GALNT4Q76KP1 1039 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 PPIL6Q8IXY8 311 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 PLD5Q8N7P1 536 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 GLT1D1Q96MS3 346 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 ADAM33Q9BZ11 813 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 RABEP2Q9H5N1 569 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 SLC12A6Q9UHW9 1150 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 CDH9Q9ULB4 789 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 HEY1Q9Y5J3 304 aa21.57■■□□□ 1.04
USP39-203ENST00000409470 MYBPHLA2RUH7 354 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms