RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 RABL2AQ9UBK7 228 aaPredicted RBP8.24□□□□□ -1.09
TRPS1-203ENST00000395715 ZMYM3Q14202 1370 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 MROH7Q68CQ1 1323 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 TRIM64CA6NLI5 447 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 M0QYV0 167 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 PSMD14O00487 310 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRPS1-203ENST00000395715 DBNDD2Q9BQY9 259 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 C9orf16Q9BUW7 83 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 UBN2Q6ZU65 1347 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 TPI1P60174 286 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 MSLNQ13421 630 aaPredicted RBP8.24□□□□□ -1.09
TRPS1-203ENST00000395715 SNX17Q15036 470 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 NUDT18Q6ZVK8 323 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 FAM220AQ7Z4H9 259 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 OR6Y1Q8NGX8 325 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 DPF3Q92784 378 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 MAGEB18Q96M61 343 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 C11orf70Q9BRQ4 267 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 WDR35Q9P2L0 1181 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 LOC110117498-PIK3R3F6TDL0 507 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 SNAP23O00161 211 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 SLC34A1Q06495 639 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 TRPV1Q8NER1 839 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 ZNF350Q9GZX5 532 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 SP140LQ9H930 580 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 TM9SF1O15321 606 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 KDM4BO94953 1096 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 OR6A2O95222 327 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 ARMC6Q6NXE6 501 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 TRIM72Q6ZMU5 477 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 CMTR2Q8IYT2 770 aaKnown RBP8.24□□□□□ -1.09
TRPS1-203ENST00000395715 TMIEQ8NEW7 156 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 PCDH19Q8TAB3 1148 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 GPRASP2Q96D09 838 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 TAGLN3Q9UI15 199 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 PCDHGA10Q9Y5H3 936 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 ASXL1Q8IXJ9 1541 aa8.24□□□□□ -1.09
TRPS1-203ENST00000395715 ERN1O75460 977 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 PRG2P13727 222 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 NME5P56597 212 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 PTK6Q13882 451 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 TCHHL1Q5QJ38 904 aaPredicted RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 AGAP9Q5VTM2 703 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 PROM2Q8N271 834 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 TDRD1Q9BXT4 1180 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 BABAM1Q9NWV8 329 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 TRNAU1APQ9NX07 287 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 WWOXQ9NZC7 414 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 RNF112Q9ULX5 631 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 SLC30A1Q9Y6M5 507 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ITSN2Q9NZM3 1697 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 MGAT4DA6NG13 374 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ASB14A6NK59 587 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 GRK4P32298 578 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ARHGEF7Q14155 803 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 RASA2Q15283 850 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 DDX53Q86TM3 631 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 HDDC3Q8N4P3 179 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ELL3Q9HB65 397 aaPredicted RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 KLHL28Q9NXS3 571 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 EDARQ9UNE0 448 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 MROH5Q6ZUA9 1318 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 NPATQ14207 1427 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 SMIM22K7EJ46 135 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 NOL4O94818 638 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 SLC1A1P43005 524 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 GEMIN4P57678 1058 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 MTHFSDQ2M296 383 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ZDHHC13Q8IUH4 622 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ERMAPQ96PL5 475 aaPredicted RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 RIBC2Q9H4K1 309 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 RXFP1Q9HBX9 757 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ZSWIM6Q9HCJ5 1215 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 TNKSO95271 1327 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ZC3H4Q9UPT8 1303 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ARL5CA6NH57 179 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ZNF185O15231 689 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 CPSF4O95639 269 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ZC2HC1CQ53FD0 456 aaPredicted RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 OOSP2Q86WS3 158 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 FIG4Q92562 907 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 PAGE5Q96GU1 130 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ZNF184Q99676 751 aaPredicted RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ACAT2Q9BWD1 397 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 RASSF1Q9NS23 344 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 CD3EAPO15446 510 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 RLN1P04808 185 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ZNF37AP17032 561 aaPredicted RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 KRT35Q92764 455 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 ERCC2P18074 760 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 MYL9P24844 172 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 STIP1P31948 543 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 CHN2P52757 468 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 CBX3Q13185 183 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 SLC27A3Q5K4L6 730 aa8.23□□□□□ -1.09
TRPS1-203ENST00000395715 CXXC5Q7LFL8 322 aaKnown RBP8.23□□□□□ -1.09
TRPS1-203ENST00000395715 RCOR2Q8IZ40 523 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms