RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 CMTM8Q8IZV2 173 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 WDTC1Q8N5D0 677 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 TMEM35BQ8NCS4 154 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 SLC20A1Q8WUM9 679 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 CPLX3Q8WVH0 158 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 NXPE3Q969Y0 559 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 NOX5Q96PH1 765 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 SLC4A5Q9BY07 1137 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 ULBP1Q9BZM6 244 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 NUCKS1Q9H1E3 243 aaKnown RBP16.74■□□□□ 0.27
PFDN4-201ENST00000371419 TRPV4Q9HBA0 871 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 CD320Q9NPF0 282 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 CNGB3Q9NQW8 809 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 AIPL1Q9NZN9 384 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 IGSF9Q9P2J2 1179 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 CYTH4Q9UIA0 394 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 LUC7L2Q9Y383 392 aaKnown RBP16.74■□□□□ 0.27
PFDN4-201ENST00000371419 C2orf78A6NCI8 922 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 CCP110O43303 1012 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 GABBR2O75899 941 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 LSM8O95777 96 aaKnown RBP16.73■□□□□ 0.27
PFDN4-201ENST00000371419 GYPCP04921 128 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 TPM1P09493 284 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 ATXN8OSP0DMR3 200 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 CHRNB2P17787 502 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 CDH5P33151 784 aaPredicted RBP16.73■□□□□ 0.27
PFDN4-201ENST00000371419 AVPR1AP37288 418 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 PSEN1P49768 467 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 TUBP50607 506 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 ZBED6P86452 979 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 TRIM14Q14142 442 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 HECTD3Q5T447 861 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 PARM1Q6UWI2 310 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 TMEM110Q86TL2 294 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 ARID3BQ8IVW6 561 aaPredicted RBP16.73■□□□□ 0.27
PFDN4-201ENST00000371419 SCML4Q8N228 414 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 ARHGAP18Q8N392 663 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 C1orf131Q8NDD1 294 aaKnown RBP16.73■□□□□ 0.27
PFDN4-201ENST00000371419 FGF14Q92915 247 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 KCNK12Q9HB15 430 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 ZFP14Q9HCL3 533 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 ANAPC1Q9H1A4 1944 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 A0A1W2PQH9 124 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 PIK3R2O00459 728 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 FBXO21O94952 628 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 OAS1P00973 400 aaKnown RBP16.73■□□□□ 0.27
PFDN4-201ENST00000371419 CKMP06732 381 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 HDCP19113 662 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 PGFP49763 221 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 TERF1P54274 439 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 SNX16P57768 344 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 FMO1Q01740 532 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 TANGO2Q6ICL3 276 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 TRIM72Q6ZMU5 477 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 SCD5Q86SK9 330 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 RNF135Q8IUD6 432 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 C17orf53Q8N3J3 647 aaPredicted RBP16.73■□□□□ 0.27
PFDN4-201ENST00000371419 ARL14EPQ8N8R7 260 aaPredicted RBP16.73■□□□□ 0.27
PFDN4-201ENST00000371419 ST13P5Q8NFI4 369 aaPredicted RBP16.73■□□□□ 0.27
PFDN4-201ENST00000371419 SYN2Q92777 582 aaPredicted RBP16.73■□□□□ 0.27
PFDN4-201ENST00000371419 E2F7Q96AV8 911 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 PPP1R13BQ96KQ4 1090 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 CYP2S1Q96SQ9 504 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 AGPAT1Q99943 283 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 NMUR1Q9HB89 426 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 CLIC5Q9NZA1 410 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 NAGPAQ9UK23 515 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 NUMBLQ9Y6R0 609 aa16.73■□□□□ 0.27
PFDN4-201ENST00000371419 MYO16Q9Y6X6 1858 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 E5RJQ4 531 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 TLR5O60602 858 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 ECI2O75521 394 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 ASGR2P07307 311 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 FCARP24071 287 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 CASP14P31944 242 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 VIPR2P41587 438 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 DAOAP59103 153 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 YWHAGP61981 247 aaKnown RBP eCLIP16.72■□□□□ 0.27
PFDN4-201ENST00000371419 E4F1Q66K89 784 aaPredicted RBP16.72■□□□□ 0.27
PFDN4-201ENST00000371419 RSAD2Q8WXG1 361 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 IRGQQ8WZA9 623 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 NDRG1Q92597 394 aaKnown RBP16.72■□□□□ 0.27
PFDN4-201ENST00000371419 ELSPBP1Q96BH3 223 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 SLC22A12Q96S37 553 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 CPXM1Q96SM3 734 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 MIS12Q9H081 205 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 CCSER2Q9H7U1 834 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.72■□□□□ 0.27
PFDN4-201ENST00000371419 OSER1Q9NX31 292 aa16.72■□□□□ 0.27
PFDN4-201ENST00000371419 AKR1B15C9JRZ8 316 aaPredicted RBP16.71■□□□□ 0.27
PFDN4-201ENST00000371419 DPYSL4O14531 572 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 SART1O43290 800 aaKnown RBP16.71■□□□□ 0.27
PFDN4-201ENST00000371419 PRAMEF12O95522 483 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 OLFM2O95897 454 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 RALAP11233 206 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 RARGP13631 454 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 PRKCIP41743 596 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 NOMO3P69849 1222 aa16.71■□□□□ 0.27
PFDN4-201ENST00000371419 ZNF268Q14587 947 aaPredicted RBP16.71■□□□□ 0.27
PFDN4-201ENST00000371419 BHLHA9Q7RTU4 235 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms