RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ATP6V1B1P15313 513 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 HSPA13P48723 471 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 MAPRE1Q15691 268 aaKnown RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 ACCSLQ4AC99 568 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 NAPEPLDQ6IQ20 393 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 FBXO36Q8NEA4 188 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 REPS2Q8NFH8 660 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 MAGEC3Q8TD91 643 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 ZNF512Q96ME7 567 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 HSD17B14Q9BPX1 270 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 TASP1Q9H6P5 420 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 MANSC1Q9H8J5 431 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 GPATCH2LQ9NWQ4 482 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 ASTN1O14525 1302 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 ACKR2O00590 384 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 EIF2S1P05198 315 aaKnown RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 IMPG1Q17R60 797 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 DDX50Q9BQ39 737 aaKnown RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 RTN3O95197 1032 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 ELF3P78545 371 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 PCSK7Q16549 785 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 CCDC60Q8IWA6 550 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 DDIASQ8IXT1 998 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 SH3TC2Q8TF17 1288 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 E2F7Q96AV8 911 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 PPP1R2P1Q96PQ5 205 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 SEPT5Q99719 369 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 WDCPQ9H6R7 721 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 EML4Q9HC35 981 aaKnown RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 NDFIP2Q9NV92 336 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 CARD8Q9Y2G2 431 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 PRG3Q9Y2Y8 225 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 MTO1Q9Y2Z2 717 aaKnown RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 PCDHA3Q9Y5H8 950 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 FDFT1P37268 417 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 MGAT5BQ3V5L5 792 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 MDH1BQ5I0G3 518 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 STKLD1Q8NE28 680 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 BAP1Q92560 729 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 KAT5Q92993 513 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 OSMRQ99650 979 aa13.72□□□□□ -0.21
PTPRK-204ENST00000368210 DDX20Q9UHI6 824 aaKnown RBP13.72□□□□□ -0.21
PTPRK-204ENST00000368210 BCL9LQ86UU0 1499 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 DISP2A7MBM2 1401 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 ZNF286BP0CG31 522 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 MAPRE2Q15555 327 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 TATDN1Q6P1N9 297 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 TRAPPC12Q8WVT3 735 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 TSPAN17Q96FV3 270 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-204ENST00000368210 UBIAD1Q9Y5Z9 338 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 KNDC1Q76NI1 1749 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 PEAK1Q9H792 1746 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 TBKBP1A7MCY6 615 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 CYB561D2O14569 222 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 OCM2P0CE71 109 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 OCMP0CE72 109 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-204ENST00000368210 SPATA31C1P0DKV0 1188 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 DLG4P78352 724 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 NDUFA5Q16718 116 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 GLT1D1Q96MS3 346 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 NDNQ99608 321 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 NSMCE4AQ9NXX6 385 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 NEMP1O14524 444 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 ODC1P11926 461 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 ITGB5P18084 799 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 THPOP40225 353 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 GTF2BQ00403 316 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 WASHC2DQ5SRD0 308 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 FAM131BQ86XD5 332 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 EPS8L1Q8TE68 723 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 PPP1R36Q96LQ0 422 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 ASB7Q9H672 318 aa13.71□□□□□ -0.21
PTPRK-204ENST00000368210 PDE2AO00408 941 aaPredicted RBP13.71□□□□□ -0.22
PTPRK-204ENST00000368210 TBC1D12O60347 775 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 FAM153BP0C7A2 387 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 RARAP10276 462 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 FAM153CQ494X1 144 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 ADGRF2Q8IZF7 708 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 DACH2Q96NX9 599 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 GANQ9H2C0 597 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 SETD4Q9NVD3 440 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 FAM153AQ9UHL3 310 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.22
PTPRK-204ENST00000368210 FZD1Q9UP38 647 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 RPS6KL1Q9Y6S9 549 aa13.71□□□□□ -0.22
PTPRK-204ENST00000368210 ZC3H4Q9UPT8 1303 aaKnown RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 CBFA2T3O75081 653 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 HMOX2P30519 316 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 FBXO47Q5MNV8 452 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 IL31Q6EBC2 164 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 AENQ8WTP8 325 aaKnown RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 ZC3H15Q8WU90 426 aaKnown RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 NCLNQ969V3 563 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 ELMO2Q96JJ3 720 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 FAM111AQ96PZ2 611 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 PKD2L2Q9NZM6 624 aa13.7□□□□□ -0.22
PTPRK-204ENST00000368210 TSR3Q9UJK0 312 aaKnown RBP13.7□□□□□ -0.22
PTPRK-204ENST00000368210 ITGA11Q9UKX5 1188 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms