RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FBXO32Q969P5 355 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 SLITRK1Q96PX8 696 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 CHP1Q99653 195 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 CISHQ9NSE2 258 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 EHD2Q9NZN4 543 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 ZMYM5Q9UJ78 669 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 MYO6Q9UM54 1294 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 CCL26Q9Y258 94 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.56□□□□□ -0.087e-8■■■□□ 15.9
TPM4-202ENST00000344824 NRDCO43847 1150 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 DCNP07585 359 aaKnown RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 PLEKP08567 350 aaPredicted RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 ACO1P21399 889 aaKnown RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 KPNA1P52294 538 aaPredicted RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 SLC5A3P53794 718 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 YWHAEP62258 255 aaKnown RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 CCZ1BP86790 482 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 CCZ1P86791 482 aaPredicted RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 KLHL30Q0D2K2 578 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 TAF10Q12962 218 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 PAQR9Q6ZVX9 377 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 MON1AQ86VX9 555 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 NUP93Q8N1F7 819 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 CELF5Q8N6W0 485 aaKnown RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 ARL14EPQ8N8R7 260 aaPredicted RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 RBBP8NLQ8NC74 664 aaPredicted RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 PRSS33Q8NF86 280 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 CYFIP2Q96F07 1278 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 MYRFLQ96LU7 910 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 ACP6Q9NPH0 428 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 AIPL1Q9NZN9 384 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 NDRG2Q9UN36 371 aaKnown RBP14.55□□□□□ -0.08
TPM4-202ENST00000344824 PIAS3Q9Y6X2 628 aa14.55□□□□□ -0.08
TPM4-202ENST00000344824 ATG2BQ96BY7 2078 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 SOWAHDA6NJG2 315 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 RTN3O95197 1032 aaPredicted RBP14.54□□□□□ -0.08
TPM4-202ENST00000344824 USP17L7P0C7H9 530 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 SOX9P48436 509 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 CLCN5P51795 746 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 PRKCQQ04759 706 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 ARHGAP29Q52LW3 1261 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 TAF3Q5VWG9 929 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 CC2D1AQ6P1N0 951 aaPredicted RBP14.54□□□□□ -0.08
TPM4-202ENST00000344824 IRF2BP2Q7Z5L9 587 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 TMEM139Q8IV31 216 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 FAM71AQ8IYT1 594 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 CRYBG2Q8N1P7 616 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 UBR7Q8N806 425 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 CCDC112Q8NEF3 446 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 SCAMP5Q8TAC9 235 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 WHAMMQ8TF30 809 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 SYN2Q92777 582 aaPredicted RBP14.54□□□□□ -0.08
TPM4-202ENST00000344824 USP13Q92995 863 aaPredicted RBP14.54□□□□□ -0.08
TPM4-202ENST00000344824 HEXIM2Q96MH2 286 aaKnown RBP14.54□□□□□ -0.08
TPM4-202ENST00000344824 SLC22A12Q96S37 553 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 CYP2S1Q96SQ9 504 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 SMOQ99835 787 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 DEF6Q9H4E7 631 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 HAUS4Q9H6D7 363 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 KIF9Q9HAQ2 790 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 TDP1Q9NUW8 608 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 THG1LQ9NWX6 298 aaKnown RBP14.54□□□□□ -0.08
TPM4-202ENST00000344824 OBP2AQ9NY56 170 aa14.54□□□□□ -0.08
TPM4-202ENST00000344824 CACNA1HO95180 2353 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 MYOFQ9NZM1 2061 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 KANSL1LA0AUZ9 987 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 FAM170AA1A519 330 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 CHADO15335 359 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 BEST1O76090 585 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 SERPING1P05155 500 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 CD19P15391 556 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 YWHAQP27348 245 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 HNRNPH3P31942 346 aaKnown RBP14.53□□□□□ -0.08
TPM4-202ENST00000344824 CLCN1P35523 988 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 EIF4A3P38919 411 aaKnown RBP14.53□□□□□ -0.08
TPM4-202ENST00000344824 FCHO2Q0JRZ9 810 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 MTF1Q14872 753 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 MEA1Q16626 185 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 PPP1R26Q5T8A7 1209 aaPredicted RBP14.53□□□□□ -0.08
TPM4-202ENST00000344824 CLEC20AQ6ZU45 233 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 SLC47A2Q86VL8 602 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 TTC39CQ8N584 583 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 PJA1Q8NG27 643 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 SLC20A1Q8WUM9 679 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 FAM122AQ96E09 287 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 CEP295NLQ96MC4 621 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 LRRC3BQ96PB8 259 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 TTLL2Q9BWV7 592 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 LTB4R2Q9NPC1 389 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 SEPT11Q9NVA2 429 aaKnown RBP14.53□□□□□ -0.08
TPM4-202ENST00000344824 ARHGAP20Q9P2F6 1191 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 SIT1Q9Y3P8 196 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 CACNA1IQ9P0X4 2223 aa14.53□□□□□ -0.08
TPM4-202ENST00000344824 CCDC172P0C7W6 258 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 MBL2P11226 248 aaPredicted RBP14.52□□□□□ -0.08
TPM4-202ENST00000344824 HDCP19113 662 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 PDE6CP51160 858 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 STARD6P59095 220 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 TNK2Q07912 1038 aa14.52□□□□□ -0.08
TPM4-202ENST00000344824 HGSNATQ68CP4 663 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms