RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 MRPS5P82675 430 aaKnown RBP14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 ARHGAP15Q53QZ3 475 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 C2CD6Q53TS8 623 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 PPP1R2P3Q6NXS1 205 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 FAM183BPQ6ZVS7 135 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 BHLHA9Q7RTU4 235 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 SCD5Q86SK9 330 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 MON1AQ86VX9 555 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 DNAAF5Q86Y56 855 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 PHF13Q86YI8 300 aaPredicted RBP14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 ARHGAP18Q8N392 663 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 IRGQQ8WZA9 623 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 ADAM22Q9P0K1 906 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 NAGPAQ9UK23 515 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 OBSL1O75147 1896 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 DENND4AQ7Z401 1863 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 NCANO14594 1321 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 YJEFN3A6XGL0 299 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 E7ENQ6 273 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 RTN2O75298 545 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 FTLP02792 175 aaPredicted RBP14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 GZMAP12544 262 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 YWHAGP61981 247 aaKnown RBP eCLIP14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 GFPT1Q06210 699 aaPredicted RBP14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 SMAD2Q15796 467 aaKnown RBP14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 AAK1Q2M2I8 961 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 ASTE1Q2TB18 679 aaPredicted RBP14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 STXBP5Q5T5C0 1151 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 GPR158Q5T848 1215 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 TXNDC8Q6A555 127 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 PHLDB2Q86SQ0 1253 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 XYLT1Q86Y38 959 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 GOLGA1Q92805 767 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 MCRS1Q96EZ8 462 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 SLITRK6Q9H5Y7 841 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 NMUR1Q9HB89 426 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 TRPC7Q9HCX4 862 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 OSER1Q9NX31 292 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 CDH7Q9ULB5 785 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 FAM50BQ9Y247 325 aa14.78□□□□□ -0.04
APOBEC3B-202ENST00000335760 C2orf78A6NCI8 922 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 GOLGA8SH3BPF8 625 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 SART1O43290 800 aaKnown RBP14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 CALB1P05937 261 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 IL9P15248 144 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 FECHP22830 423 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 DDX6P26196 483 aaKnown RBP eCLIP14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 GBP2P32456 591 aaPredicted RBP14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 KCNQ1P51787 676 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 SLC6A3Q01959 620 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 C1QBPQ07021 282 aaKnown RBP14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 PTP4A2Q12974 167 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 SLC18A3Q16572 532 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 CCDC122Q5T0U0 273 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 HECTD3Q5T447 861 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 SNX30Q5VWJ9 437 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 BSPRYQ5W0U4 402 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 ALKBH5Q6P6C2 394 aaKnown RBP14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 OLFML1Q6UWY5 402 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 HFE2Q6ZVN8 426 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 MON1BQ7L1V2 547 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 ZDHHC17Q8IUH5 632 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 TMTC1Q8IUR5 882 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 NPAS3Q8IXF0 933 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 MCOLN2Q8IZK6 566 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 MAB21L3Q8N8X9 362 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 FGF13Q92913 245 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 FAM149B1Q96BN6 582 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 PIWIL1Q96J94 861 aaKnown RBP14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 ZSWIM3Q96MP5 696 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 MYADMQ96S97 322 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 BAG1Q99933 345 aaPredicted RBP14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 PHF7Q9BWX1 381 aaPredicted RBP14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 SLC46A2Q9BY10 475 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 TASP1Q9H6P5 420 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 SPTLC3Q9NUV7 552 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 DENND4CQ5VZ89 1909 aa14.77□□□□□ -0.04
APOBEC3B-202ENST00000335760 ANAPC1Q9H1A4 1944 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 LTFP02788 710 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 RALAP11233 206 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 RARGP13631 454 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 SP100P23497 879 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 PSEN1P49768 467 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 ZNF268Q14587 947 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 TAF5Q15542 800 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 FAM102AQ5T9C2 384 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 BTBD8Q5XKL5 378 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 POTEHQ6S545 545 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 TOGARAM2Q6ZUX3 1019 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 CCDC170Q8IYT3 715 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 EDEM1Q92611 657 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 VCPIP1Q96JH7 1222 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 CYP2S1Q96SQ9 504 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 ISCUQ9H1K1 167 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 CCSER2Q9H7U1 834 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 CLIC5Q9NZA1 410 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 STRIP2Q9ULQ0 834 aa14.76□□□□□ -0.05
APOBEC3B-202ENST00000335760 NENFQ9UMX5 172 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms