RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ZNF395Q9H8N7 513 aaPredicted RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 SLC24A2Q9UI40 661 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 CHKBQ9Y259 395 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 SPECC1L-ADORA2AF8WAN1 911 aa16.52■□□□□ 0.23
SMAD6-201ENST00000288840 CCDC22O60826 627 aa16.52■□□□□ 0.23
SMAD6-201ENST00000288840 CCDC130P13994 396 aa16.52■□□□□ 0.23
SMAD6-201ENST00000288840 STIP1P31948 543 aaKnown RBP16.52■□□□□ 0.23
SMAD6-201ENST00000288840 SERPINB4P48594 390 aa16.52■□□□□ 0.23
SMAD6-201ENST00000288840 STX3Q13277 289 aa16.52■□□□□ 0.23
SMAD6-201ENST00000288840 RNASEH2BQ5TBB1 312 aaKnown RBP16.52■□□□□ 0.23
SMAD6-201ENST00000288840 CPSF2Q9P2I0 782 aaKnown RBP16.52■□□□□ 0.23
SMAD6-201ENST00000288840 FNDC3AQ9Y2H6 1198 aaKnown RBP16.52■□□□□ 0.23
SMAD6-201ENST00000288840 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.52■□□□□ 0.23
SMAD6-201ENST00000288840 NFKBIEO00221 500 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 BNIP1Q12981 228 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 POLNQ7Z5Q5 900 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 TMEM109Q9BVC6 243 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 MAFBQ9Y5Q3 323 aaPredicted RBP16.51■□□□□ 0.23
SMAD6-201ENST00000288840 MEI4A8MW99 385 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 SULT1E1P49888 294 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 PDK4Q16654 411 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 EFCAB3Q8N7B9 438 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 OLIG1Q8TAK6 271 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 SLC26A7Q8TE54 656 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 PACSIN3Q9UKS6 424 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 LAMB2P55268 1798 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 APOC4-APOC2K7ER74 178 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 HUS1O60921 280 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 APOC2P02655 101 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 SRGAP2BP0DMP2 458 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 ADCYAP1R1P41586 468 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 RABGGTBP53611 331 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 SWT1Q5T5J6 900 aaKnown RBP16.51■□□□□ 0.23
SMAD6-201ENST00000288840 TTC7BQ86TV6 843 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 NSL1Q96IY1 281 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 STOML1Q9UBI4 398 aa16.51■□□□□ 0.23
SMAD6-201ENST00000288840 EDF1O60869 148 aaKnown RBP16.5■□□□□ 0.23
SMAD6-201ENST00000288840 VDRP11473 427 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 CYP2F1P24903 491 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 RASA2Q15283 850 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 EXOC8Q8IYI6 725 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 BEST2Q8NFU1 509 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 FBXO41Q8TF61 875 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 R3HDMLQ9H3Y0 253 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 APOBEC2Q9Y235 224 aaKnown RBP16.5■□□□□ 0.23
SMAD6-201ENST00000288840 HCRTO43612 131 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 UGT1A9O60656 530 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 MSCO60682 206 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 ITGAVP06756 1048 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 RTP1P59025 263 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 SEPT6Q14141 434 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 KCNT2Q6UVM3 1135 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 EP400NLQ6ZTU2 488 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 BBS12Q6ZW61 710 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 ALYREFQ86V81 257 aaKnown RBP16.5■□□□□ 0.23
SMAD6-201ENST00000288840 PIWIL1Q96J94 861 aaKnown RBP16.5■□□□□ 0.23
SMAD6-201ENST00000288840 UGT1A7Q9HAW7 530 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 UGT1A10Q9HAW8 530 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 UGT1A8Q9HAW9 530 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 NFASCO94856 1347 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 IL18RAPO95256 599 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 HSPA4LO95757 839 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 KLRC2P26717 231 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 CACNB2Q08289 660 aaPredicted RBP16.5■□□□□ 0.23
SMAD6-201ENST00000288840 RASIP1Q5U651 963 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 EMC10Q5UCC4 262 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 TTC39BQ5VTQ0 682 aaPredicted RBP16.5■□□□□ 0.23
SMAD6-201ENST00000288840 RHBDF2Q6PJF5 856 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 RGS9BPQ6ZS82 235 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 TMEM134Q9H6X4 195 aa16.5■□□□□ 0.23
SMAD6-201ENST00000288840 FCHO1O14526 889 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 MGRN1O60291 552 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 TRUB2O95900 331 aaKnown RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 CTSHP09668 335 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 KLF1Q13351 362 aaPredicted RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 PPP1R26Q5T8A7 1209 aaPredicted RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 SLC26A11Q86WA9 606 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 CCNYL1Q8N7R7 359 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 MCUQ8NE86 351 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 SLC17A6Q9P2U8 582 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 H3BRB1 525 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 DGKIO75912 1065 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 ASMTLO95671 621 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 TOP3BO95985 862 aaKnown RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 SLC4A1P02730 911 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 UBTFL6P0CB48 400 aaPredicted RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 KPNB1Q14974 876 aaKnown RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 GRAMD1BQ3KR37 738 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 BOLA3Q53S33 107 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 SNRNP25Q9BV90 132 aaKnown RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 TUT1Q9H6E5 874 aaKnown RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 AP4E1Q9UPM8 1137 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 CNTNAP2Q9UHC6 1331 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 WDR27A2RRH5 827 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 MAP3K7O43318 606 aa16.49■□□□□ 0.23
SMAD6-201ENST00000288840 MOCS2O96007 188 aaPredicted RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
SMAD6-201ENST00000288840 MLH1P40692 756 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms