RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TSEN34Q9BSV6 310 aaKnown RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 MED10Q9BTT4 135 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 SNRNP25Q9BV90 132 aaKnown RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 C10orf88Q9H8K7 445 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 UBN1Q9NPG3 1134 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 CREBZFQ9NS37 354 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 TIMM13Q9Y5L4 95 aaPredicted RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 MYBPHLA2RUH7 354 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ERICH4A6NGS2 130 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 NDC80O14777 642 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 POMCP01189 267 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 IFNB1P01574 187 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 GNGT1P63211 74 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 MRPS5P82675 430 aaKnown RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ADCY1Q08828 1119 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 MORF4L2Q15014 288 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 NOMO1Q15155 1222 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 CA9Q16790 459 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 TIGD5Q53EQ6 642 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ANKRD20A8PQ5CZ79 823 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 NPNTQ6UXI9 565 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 LEKR1Q6ZMV7 388 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 CLEC20AQ6ZU45 233 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ECHDC2Q86YB7 292 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 SPATA18Q8TC71 538 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 RSAD2Q8WXG1 361 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 NDRG1Q92597 394 aaKnown RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 GLT1D1Q96MS3 346 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 SYT15Q9BQS2 421 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 DNAJC17Q9NVM6 304 aaKnown RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 CDH9Q9ULB4 789 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 MOXD2PA6NHM9 499 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 ZNF487B1APH4 448 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 RASGRF2O14827 1237 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 GNRH1P01148 92 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 FAM200BP0CF97 657 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 RBP3P10745 1247 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 CKBP12277 381 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 PAX3P23760 479 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 STIP1P31948 543 aaKnown RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 L1CAMP32004 1257 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 HPDP32754 393 aaPredicted RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 RPL22P35268 128 aaKnown RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 MDH1P40925 334 aaKnown RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 MATKP42679 507 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 MAGEA4P43358 317 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 NDUFV1P49821 464 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 ATXN1P54253 815 aaKnown RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 GDF10P55107 478 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 MAP3K7CLP57077 242 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 MAGOHP61326 146 aaKnown RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 YWHAZP63104 245 aaKnown RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 ADIGQ0VDE8 80 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 RNASEH2BQ5TBB1 312 aaKnown RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 LHX8Q68G74 356 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 CD300LGQ6UXG3 332 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 STRADAQ7RTN6 431 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 PCGF5Q86SE9 256 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 ZNF598Q86UK7 904 aaKnown RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 RTN4RL1Q86UN2 441 aaPredicted RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 DEFB106AQ8N104 65 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 PQLC3Q8N755 202 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 PLD5Q8N7P1 536 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 PCDH19Q8TAB3 1148 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 TRAF3IP1Q8TDR0 691 aaPredicted RBP10□□□□□ -0.81
TRIM55-201ENST00000276573 P3H4Q92791 437 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 RBM15Q96T37 977 aaKnown RBP eCLIP10□□□□□ -0.81
TRIM55-201ENST00000276573 TRPV6Q9H1D0 765 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 LRRC4Q9HBW1 653 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 NINJ2Q9NZG7 142 aa10□□□□□ -0.81
TRIM55-201ENST00000276573 DCDC2CA8MYV0 355 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 MCF2LO15068 1137 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 RGS16O15492 202 aaPredicted RBP9.99□□□□□ -0.81
TRIM55-201ENST00000276573 ACSL3O95573 720 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 IBSPP21815 317 aaPredicted RBP9.99□□□□□ -0.81
TRIM55-201ENST00000276573 NOS2P35228 1153 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 PPP2R2AP63151 447 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 GRIK3Q13003 919 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 SLC25A52Q3SY17 297 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 SLC9A4Q6AI14 798 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 TTC19Q6DKK2 380 aaPredicted RBP9.99□□□□□ -0.81
TRIM55-201ENST00000276573 DARS2Q6PI48 645 aaKnown RBP9.99□□□□□ -0.81
TRIM55-201ENST00000276573 C1orf228Q6PIY5 440 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 SLC43A3Q8NBI5 491 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 MYCBPAPQ8TBZ2 947 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 NT5C3BQ969T7 300 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 FAF2Q96CS3 445 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 SMOQ99835 787 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 RGS18Q9NS28 235 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 PTCH2Q9Y6C5 1203 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 THSD7BQ9C0I4 1608 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 SMIM23A6NLE4 172 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 I3L4J1 428 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 APOL1O14791 398 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 INPPL1O15357 1258 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 DAB1O75553 588 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 TCEA3O75764 348 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 AP1G2O75843 785 aa9.99□□□□□ -0.81
TRIM55-201ENST00000276573 B3GAT3O94766 335 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms