RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 GRAMD1BQ3KR37 738 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 SFT2D3Q587I9 215 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 RNF111Q6ZNA4 994 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 NUDCD3Q8IVD9 361 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 SCUBE1Q8IWY4 988 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 NAT8LQ8N9F0 302 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 MARK4Q96L34 752 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 PEBP4Q96S96 227 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 EPAS1Q99814 870 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 DDX18Q9NVP1 670 aaKnown RBP13.52□□□□□ -0.25
SNX1-201ENST00000261889 ETAA1Q9NY74 926 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 WDR35Q9P2L0 1181 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 HEMK1Q9Y5R4 338 aaPredicted RBP13.52□□□□□ -0.25
SNX1-201ENST00000261889 DOCK5Q9H7D0 1870 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 RARBP10826 455 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 AQP4P55087 323 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 MRPS5P82675 430 aaKnown RBP13.52□□□□□ -0.25
SNX1-201ENST00000261889 LAMB3Q13751 1172 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 EMC2Q15006 297 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 ZBTB46Q86UZ6 589 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 SATL1Q86VE3 508 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 HPS6Q86YV9 775 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 C4orf19Q8IY42 314 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 SMC1BQ8NDV3 1235 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 RNF146Q9NTX7 359 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 ETNK2Q9NVF9 386 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 CNTNAP2Q9UHC6 1331 aa13.52□□□□□ -0.25
SNX1-201ENST00000261889 NEMP1O14524 444 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 WFS1O76024 890 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 PROCP04070 461 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 RBL1P28749 1068 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 CCR10P46092 362 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 ACTR2P61160 394 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 CDC16Q13042 620 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 DPYSL3Q14195 570 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 PRKD1Q15139 912 aaPredicted RBP13.51□□□□□ -0.25
SNX1-201ENST00000261889 ADGRD1Q6QNK2 874 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 SNX31Q8N9S9 440 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 TTC25Q96NG3 672 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 GCNAQ96QF7 691 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 IMPG2Q9BZV3 1241 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 PCDH9Q9HC56 1237 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 PXMP2Q9NR77 195 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 PLA2G4CQ9UP65 541 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 ACTL7BQ9Y614 415 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 A0A1B0GTW7 788 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 EXTL3O43909 919 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 FESP07332 822 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 ABHD2P08910 425 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 TFE3P19532 575 aaPredicted RBP13.51□□□□□ -0.25
SNX1-201ENST00000261889 PHBP35232 272 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 RASSF3Q86WH2 238 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 TNS4Q8IZW8 715 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 RIBC1Q8N443 379 aaPredicted RBP13.51□□□□□ -0.25
SNX1-201ENST00000261889 C12orf29Q8N999 325 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 PNPOQ9NVS9 261 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 NDE1Q9NXR1 346 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 ZC3H7BQ9UGR2 993 aaKnown RBP13.51□□□□□ -0.25
SNX1-201ENST00000261889 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
SNX1-201ENST00000261889 GOLGA8TH3BQL2 631 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 I3L4J1 428 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 HCRTO43612 131 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 PEX1O43933 1283 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 ERBB2P04626 1255 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 ARSAP15289 507 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 GRIA2P42262 883 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 SCNN1BP51168 640 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 HSD17B4P51659 736 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 CCNG1P51959 295 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 CNTN2Q02246 1040 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 TCEAL1Q15170 157 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 AMHR2Q16671 573 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 CA9Q16790 459 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 FAM102AQ5T9C2 384 aaPredicted RBP13.51□□□□□ -0.25
SNX1-201ENST00000261889 SNRNP48Q6IEG0 339 aaKnown RBP13.51□□□□□ -0.25
SNX1-201ENST00000261889 C12orf56Q8IXR9 622 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 SLC35B2Q8TB61 432 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 NLRP4Q96MN2 994 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 RPAP3Q9H6T3 665 aaPredicted RBP13.51□□□□□ -0.25
SNX1-201ENST00000261889 PGAP2Q9UHJ9 254 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 SNCAIPQ9Y6H5 919 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 SCINQ9Y6U3 715 aa13.51□□□□□ -0.25
SNX1-201ENST00000261889 SESN2P58004 480 aaPredicted RBP13.5□□□□□ -0.25
SNX1-201ENST00000261889 DEUP1Q05D60 604 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 TRPC3Q13507 836 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 C11orf91Q3C1V1 193 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 TMC2Q8TDI7 906 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 AZIN2Q96A70 460 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 RHBDL2Q9NX52 303 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 E9PBE3 544 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 SLC26A4O43511 780 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 KLHL41O60662 606 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 KDELR1P24390 212 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 ETV4P43268 484 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 ASPHQ12797 758 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 ACAP1Q15027 740 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms