RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 ARFGAP2Q8N6H7 521 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 MYCBPAPQ8TBZ2 947 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 P3H4Q92791 437 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 SNRNP25Q9BV90 132 aaKnown RBP18.17■□□□□ 0.5
VRK1-201ENST00000216639 EPB41L4BQ9H329 900 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 TPX2Q9ULW0 747 aaKnown RBP18.17■□□□□ 0.5
VRK1-201ENST00000216639 TIMM13Q9Y5L4 95 aaPredicted RBP18.17■□□□□ 0.5
VRK1-201ENST00000216639 ZNF487B1APH4 448 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 INPPL1O15357 1258 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 DAB1O75553 588 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 IFNB1P01574 187 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 CAPN2P17655 700 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 EIF3EP60228 445 aaKnown RBP18.16■□□□□ 0.5
VRK1-201ENST00000216639 MRPS5P82675 430 aaKnown RBP18.16■□□□□ 0.5
VRK1-201ENST00000216639 GPS1Q13098 491 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 GLB1LQ6UWU2 654 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 SLC24A5Q71RS6 500 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 ZNF598Q86UK7 904 aaKnown RBP18.16■□□□□ 0.5
VRK1-201ENST00000216639 FAM35AQ86V20 835 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 FAM149B1Q96BN6 582 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 RNF157Q96PX1 679 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 ZNF670Q9BS34 389 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 C11orf84Q9BUA3 381 aaPredicted RBP18.16■□□□□ 0.5
VRK1-201ENST00000216639 SAE1Q9UBE0 346 aaPredicted RBP18.16■□□□□ 0.5
VRK1-201ENST00000216639 STAP1Q9ULZ2 295 aa18.16■□□□□ 0.5
VRK1-201ENST00000216639 ARVCFO00192 962 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 APOL1O14791 398 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 AP1G2O75843 785 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 CYP11A1P05108 521 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 TGM2P21980 687 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 IGFBP6P24592 240 aaPredicted RBP18.15■□□□□ 0.5
VRK1-201ENST00000216639 MAP3K7CLP57077 242 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 YWHAZP63104 245 aaKnown RBP18.15■□□□□ 0.5
VRK1-201ENST00000216639 MORF4L2Q15014 288 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 SLC25A52Q3SY17 297 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 RAB6CQ53S08 254 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 KIAA0319Q5VV43 1072 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 DCLRE1AQ6PJP8 1040 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 PCED1BQ96HM7 432 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 ACBD6Q9BR61 282 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 PAAF1Q9BRP4 392 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 RAB6CQ9H0N0 254 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 CDC42EP4Q9H3Q1 356 aaKnown RBP18.15■□□□□ 0.5
VRK1-201ENST00000216639 PCDH18Q9HCL0 1135 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 BCCIPQ9P287 314 aaKnown RBP eCLIP18.15■□□□□ 0.5
VRK1-201ENST00000216639 MYBPHLA2RUH7 354 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 M0QZQ0 153 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 NR1D1P20393 614 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 NOS2P35228 1153 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 CHKAP35790 457 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 VEGFBP49765 207 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 TKTL1P51854 596 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 ADCY1Q08828 1119 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 MMRN1Q13201 1228 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 NOMO1Q15155 1222 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 ANKRD20A8PQ5CZ79 823 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 KDM7AQ6ZMT4 941 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 THEM5Q8N1Q8 247 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 ZCCHC9Q8N567 271 aaKnown RBP18.15■□□□□ 0.5
VRK1-201ENST00000216639 SH2D3CQ8N5H7 860 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 URGCPQ8TCY9 931 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 SMARCD1Q96GM5 515 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 TMEM109Q9BVC6 243 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 FTHL17Q9BXU8 183 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 AAASQ9NRG9 546 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 PHF24Q9UPV7 400 aa18.15■□□□□ 0.5
VRK1-201ENST00000216639 C9IYK1 514 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 BEST1O76090 585 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 ZSCAN5DPP0CG00 497 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 RBP3P10745 1247 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 ZFXP17010 805 aaPredicted RBP18.14■□□□□ 0.49
VRK1-201ENST00000216639 STIP1P31948 543 aaKnown RBP18.14■□□□□ 0.49
VRK1-201ENST00000216639 SULT1E1P49888 294 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 SKOR1P84550 965 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 ROR1Q01973 937 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 ZC3H12AQ5D1E8 599 aaKnown RBP18.14■□□□□ 0.49
VRK1-201ENST00000216639 C6orf118Q5T5N4 469 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 EMC10Q5UCC4 262 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 LEKR1Q6ZMV7 388 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 PRUNE1Q86TP1 453 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 RELL1Q8IUW5 271 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 DEFB106AQ8N104 65 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 CAPS2Q9BXY5 557 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 STMN4Q9H169 189 aaPredicted RBP18.14■□□□□ 0.49
VRK1-201ENST00000216639 CNGB3Q9NQW8 809 aa18.14■□□□□ 0.49
VRK1-201ENST00000216639 TDRD15B5MCY1 1934 aaKnown RBP18.14■□□□□ 0.49
VRK1-201ENST00000216639 SMAPO00193 183 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 TTC4O95801 387 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 SHBGP04278 402 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 PECAM1P16284 738 aaPredicted RBP18.13■□□□□ 0.49
VRK1-201ENST00000216639 BCAR1P56945 870 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 MAPRE1Q15691 268 aaKnown RBP18.13■□□□□ 0.49
VRK1-201ENST00000216639 DPYSL2Q16555 572 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 CCDC142Q17RM4 750 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 DCAF6Q58WW2 860 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 DNAJC21Q5F1R6 531 aaKnown RBP18.13■□□□□ 0.49
VRK1-201ENST00000216639 PPP6R3Q5H9R7 873 aaPredicted RBP18.13■□□□□ 0.49
VRK1-201ENST00000216639 DARS2Q6PI48 645 aaKnown RBP18.13■□□□□ 0.49
VRK1-201ENST00000216639 TRAF7Q6Q0C0 670 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 PSTKQ8IV42 348 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms