RNA–Protein interactions for RNA: ENST00000622120.1

LINC00963-213, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 355 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-213ENST00000622120 CDC42BPGQ6DT37 1551 aa18.21■□□□□ 0.51
LINC00963-213ENST00000622120 DCAF11Q8TEB1 546 aa18.21■□□□□ 0.51
LINC00963-213ENST00000622120 STAC3Q96MF2 364 aa18.2■□□□□ 0.5
LINC00963-213ENST00000622120 MEX3CQ5U5Q3 659 aaKnown RBP18.19■□□□□ 0.5
LINC00963-213ENST00000622120 DDX17Q92841 729 aaKnown RBP18.19■□□□□ 0.5
LINC00963-213ENST00000622120 LRRC59Q96AG4 307 aaKnown RBP18.19■□□□□ 0.5
LINC00963-213ENST00000622120 SIRT1Q96EB6 747 aa18.19■□□□□ 0.5
LINC00963-213ENST00000622120 ORAI2Q96SN7 254 aa18.19■□□□□ 0.5
LINC00963-213ENST00000622120 RGS17Q9UGC6 210 aaPredicted RBP18.19■□□□□ 0.5
LINC00963-213ENST00000622120 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
LINC00963-213ENST00000622120 ESCO1Q5FWF5 840 aa18.16■□□□□ 0.5
LINC00963-213ENST00000622120 NUTM2BA6NNL0 878 aaPredicted RBP18.15■□□□□ 0.5
LINC00963-213ENST00000622120 NUTM2EB1AL46 878 aaPredicted RBP18.15■□□□□ 0.5
LINC00963-213ENST00000622120 NUTM2AQ8IVF1 878 aaPredicted RBP18.15■□□□□ 0.5
LINC00963-213ENST00000622120 LRP6O75581 1613 aa18.15■□□□□ 0.5
LINC00963-213ENST00000622120 NUTM2FA1L443 756 aa18.14■□□□□ 0.49
LINC00963-213ENST00000622120 POGKQ9P215 609 aa18.14■□□□□ 0.49
LINC00963-213ENST00000622120 FMN2Q9NZ56 1722 aa18.14■□□□□ 0.49
LINC00963-213ENST00000622120 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
LINC00963-213ENST00000622120 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.49
LINC00963-213ENST00000622120 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
LINC00963-213ENST00000622120 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
LINC00963-213ENST00000622120 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
LINC00963-213ENST00000622120 SOS2Q07890 1332 aaPredicted RBP18.12■□□□□ 0.49
LINC00963-213ENST00000622120 PNPLA6Q8IY17 1366 aa18.12■□□□□ 0.49
LINC00963-213ENST00000622120 TRAK1Q9UPV9 953 aa18.11■□□□□ 0.49
LINC00963-213ENST00000622120 NPHP3Q7Z494 1330 aa18.11■□□□□ 0.49
LINC00963-213ENST00000622120 ZNF772Q68DY9 489 aaPredicted RBP18.08■□□□□ 0.48
LINC00963-213ENST00000622120 RGPD8O14715 1765 aaPredicted RBP18.08■□□□□ 0.48
LINC00963-213ENST00000622120 KIF1AQ12756 1690 aa18.08■□□□□ 0.48
LINC00963-213ENST00000622120 FOXO3O43524 673 aa18.07■□□□□ 0.48
LINC00963-213ENST00000622120 XPCQ01831 940 aaPredicted RBP18.05■□□□□ 0.48
LINC00963-213ENST00000622120 KIAA1210Q9ULL0 1709 aa18.05■□□□□ 0.48
LINC00963-213ENST00000622120 PXDNQ92626 1479 aa18.05■□□□□ 0.48
LINC00963-213ENST00000622120 ADGRB2O60241 1585 aa18.04■□□□□ 0.48
LINC00963-213ENST00000622120 MINK1Q8N4C8 1332 aaPredicted RBP18.03■□□□□ 0.48
LINC00963-213ENST00000622120 C8orf37Q96NL8 207 aa18.03■□□□□ 0.48
LINC00963-213ENST00000622120 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
LINC00963-213ENST00000622120 PHF8Q9UPP1 1060 aa18.03■□□□□ 0.48
LINC00963-213ENST00000622120 ARHGEF28Q8N1W1 1705 aaKnown RBP18.03■□□□□ 0.48
LINC00963-213ENST00000622120 AFF2P51816 1311 aa18.02■□□□□ 0.48
LINC00963-213ENST00000622120 COL22A1Q8NFW1 1626 aaPredicted RBP18.02■□□□□ 0.48
LINC00963-213ENST00000622120 ANKARQ7Z5J8 1434 aa18.01■□□□□ 0.47
LINC00963-213ENST00000622120 ADAMTS2O95450 1211 aa18.01■□□□□ 0.47
LINC00963-213ENST00000622120 EIF3AQ14152 1382 aaKnown RBP18.01■□□□□ 0.47
LINC00963-213ENST00000622120 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
LINC00963-213ENST00000622120 PSME1Q06323 249 aa17.99■□□□□ 0.47
LINC00963-213ENST00000622120 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
LINC00963-213ENST00000622120 NGLY1Q96IV0 654 aa17.99■□□□□ 0.47
LINC00963-213ENST00000622120 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
LINC00963-213ENST00000622120 USP32Q8NFA0 1604 aa17.98■□□□□ 0.47
LINC00963-213ENST00000622120 WASLO00401 505 aaPredicted RBP17.98■□□□□ 0.47
LINC00963-213ENST00000622120 TRIM26Q12899 539 aaPredicted RBP17.98■□□□□ 0.47
LINC00963-213ENST00000622120 L3MBTL2Q969R5 705 aa17.98■□□□□ 0.47
LINC00963-213ENST00000622120 RXRBP28702 533 aa17.97■□□□□ 0.47
LINC00963-213ENST00000622120 TULP4Q9NRJ4 1543 aa17.97■□□□□ 0.47
LINC00963-213ENST00000622120 SPATA31A3Q5VYP0 1347 aa17.97■□□□□ 0.47
LINC00963-213ENST00000622120 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
LINC00963-213ENST00000622120 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
LINC00963-213ENST00000622120 MARF1Q9Y4F3 1742 aaKnown RBP17.95■□□□□ 0.46
LINC00963-213ENST00000622120 QTRT2Q9H974 415 aaKnown RBP17.94■□□□□ 0.46
LINC00963-213ENST00000622120 TNS3Q68CZ2 1445 aa17.94■□□□□ 0.46
LINC00963-213ENST00000622120 PRR36Q9H6K5 1346 aa17.94■□□□□ 0.46
LINC00963-213ENST00000622120 ITSN1Q15811 1721 aa17.93■□□□□ 0.46
LINC00963-213ENST00000622120 SBNO1A3KN83 1393 aa17.92■□□□□ 0.46
LINC00963-213ENST00000622120 LMOD2Q6P5Q4 547 aa17.92■□□□□ 0.46
LINC00963-213ENST00000622120 USP21Q9UK80 565 aa17.92■□□□□ 0.46
LINC00963-213ENST00000622120 GPRASP1Q5JY77 1395 aa17.91■□□□□ 0.46
LINC00963-213ENST00000622120 HAP1P54257 671 aaPredicted RBP17.91■□□□□ 0.46
LINC00963-213ENST00000622120 ARHGEF10O15013 1369 aa17.91■□□□□ 0.46
LINC00963-213ENST00000622120 RBM6P78332 1123 aaKnown RBP17.9■□□□□ 0.46
LINC00963-213ENST00000622120 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
LINC00963-213ENST00000622120 NUDT16Q96DE0 195 aaKnown RBP17.9■□□□□ 0.46
LINC00963-213ENST00000622120 CDK19Q9BWU1 502 aa17.9■□□□□ 0.46
LINC00963-213ENST00000622120 CENPJQ9HC77 1338 aaPredicted RBP17.9■□□□□ 0.46
LINC00963-213ENST00000622120 CDK12Q9NYV4 1490 aaPredicted RBP17.89■□□□□ 0.45
LINC00963-213ENST00000622120 FNBP4Q8N3X1 1017 aaPredicted RBP17.89■□□□□ 0.45
LINC00963-213ENST00000622120 TRPM1Q7Z4N2 1603 aa17.89■□□□□ 0.45
LINC00963-213ENST00000622120 ATP7BP35670 1465 aa17.88■□□□□ 0.45
LINC00963-213ENST00000622120 PLEKHG5O94827 1062 aa17.88■□□□□ 0.45
LINC00963-213ENST00000622120 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
LINC00963-213ENST00000622120 TRPM3Q9HCF6 1732 aaPredicted RBP17.88■□□□□ 0.45
LINC00963-213ENST00000622120 QRICH2Q9H0J4 1663 aa17.87■□□□□ 0.45
LINC00963-213ENST00000622120 ROCK2O75116 1388 aaKnown RBP17.86■□□□□ 0.45
LINC00963-213ENST00000622120 CABLES1Q8TDN4 633 aa17.85■□□□□ 0.45
LINC00963-213ENST00000622120 ABCA3Q99758 1704 aa17.85■□□□□ 0.45
LINC00963-213ENST00000622120 TOPAZ1Q8N9V7 1692 aa17.84■□□□□ 0.45
LINC00963-213ENST00000622120 ALS2Q96Q42 1657 aa17.84■□□□□ 0.45
LINC00963-213ENST00000622120 ATRNO75882 1429 aa17.84■□□□□ 0.45
LINC00963-213ENST00000622120 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
LINC00963-213ENST00000622120 SRPK2P78362 688 aaKnown RBP17.84■□□□□ 0.45
LINC00963-213ENST00000622120 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
LINC00963-213ENST00000622120 TONSLQ96HA7 1378 aa17.83■□□□□ 0.45
LINC00963-213ENST00000622120 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.83■□□□□ 0.44
LINC00963-213ENST00000622120 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
LINC00963-213ENST00000622120 RGS12O14924 1447 aa17.82■□□□□ 0.44
LINC00963-213ENST00000622120 UNC5CLQ8IV45 518 aa17.81■□□□□ 0.44
LINC00963-213ENST00000622120 ACEP12821 1306 aa17.8■□□□□ 0.44
LINC00963-213ENST00000622120 PLEKHG3A1L390 1219 aa17.8■□□□□ 0.44
LINC00963-213ENST00000622120 NBPF8Q3BBV2 869 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms