RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 HSP90AB1P08238 724 aaKnown RBP8.74□□□□□ -1.01
NEDD9-216ENST00000620854 LMOD2Q6P5Q4 547 aa8.74□□□□□ -1.01
NEDD9-216ENST00000620854 GRPEL1Q9HAV7 217 aa8.74□□□□□ -1.01
NEDD9-216ENST00000620854 CEP170Q5SW79 1584 aa8.73□□□□□ -1.01
NEDD9-216ENST00000620854 STAC3Q96MF2 364 aa8.73□□□□□ -1.01
NEDD9-216ENST00000620854 KDM5DQ9BY66 1539 aa8.73□□□□□ -1.01
NEDD9-216ENST00000620854 WDR7Q9Y4E6 1490 aa8.73□□□□□ -1.01
NEDD9-216ENST00000620854 GPRASP1Q5JY77 1395 aa8.73□□□□□ -1.01
NEDD9-216ENST00000620854 GOLGA6L22H0YM25 854 aa8.73□□□□□ -1.01
NEDD9-216ENST00000620854 ASXL2Q76L83 1435 aa8.73□□□□□ -1.01
NEDD9-216ENST00000620854 FANCAO15360 1455 aa8.73□□□□□ -1.01
NEDD9-216ENST00000620854 ESPNB1AK53 854 aa8.72□□□□□ -1.01
NEDD9-216ENST00000620854 TMEM132EQ6IEE7 984 aa8.72□□□□□ -1.01
NEDD9-216ENST00000620854 DZIP1LQ8IYY4 767 aaKnown RBP8.72□□□□□ -1.01
NEDD9-216ENST00000620854 MRE11P49959 708 aa8.72□□□□□ -1.01
NEDD9-216ENST00000620854 HAP1P54257 671 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-216ENST00000620854 HDGFL2Q7Z4V5 671 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-216ENST00000620854 GAS2L3Q86XJ1 694 aa8.72□□□□□ -1.01
NEDD9-216ENST00000620854 RUNDC1Q96C34 613 aa8.72□□□□□ -1.01
NEDD9-216ENST00000620854 ERBB4Q15303 1308 aa8.72□□□□□ -1.01
NEDD9-216ENST00000620854 CLCN1P35523 988 aa8.71□□□□□ -1.01
NEDD9-216ENST00000620854 ZKSCAN2Q63HK3 967 aa8.71□□□□□ -1.01
NEDD9-216ENST00000620854 RBM42Q9BTD8 480 aaKnown RBP8.71□□□□□ -1.01
NEDD9-216ENST00000620854 EXOSC9Q06265 439 aaKnown RBP8.71□□□□□ -1.02
NEDD9-216ENST00000620854 ELL2O00472 640 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-216ENST00000620854 PTMAP06454 111 aaKnown RBP8.71□□□□□ -1.02
NEDD9-216ENST00000620854 MVPQ14764 893 aaKnown RBP8.71□□□□□ -1.02
NEDD9-216ENST00000620854 E9PCH4 1651 aa8.7□□□□□ -1.02
NEDD9-216ENST00000620854 FSD2A1L4K1 749 aa8.7□□□□□ -1.02
NEDD9-216ENST00000620854 TNPO1Q92973 898 aaKnown RBP8.7□□□□□ -1.02
NEDD9-216ENST00000620854 C1orf115Q9H7X2 142 aa8.7□□□□□ -1.02
NEDD9-216ENST00000620854 ADGBQ8N7X0 1667 aa8.7□□□□□ -1.02
NEDD9-216ENST00000620854 PLCB2Q00722 1185 aa8.7□□□□□ -1.02
NEDD9-216ENST00000620854 PLCH2O75038 1416 aa8.7□□□□□ -1.02
NEDD9-216ENST00000620854 RBM10P98175 930 aaKnown RBP8.7□□□□□ -1.02
NEDD9-216ENST00000620854 ADGRF5Q8IZF2 1346 aa8.7□□□□□ -1.02
NEDD9-216ENST00000620854 TRPM1Q7Z4N2 1603 aa8.7□□□□□ -1.02
NEDD9-216ENST00000620854 ABCC2Q92887 1545 aa8.7□□□□□ -1.02
NEDD9-216ENST00000620854 DNTTIP2Q5QJE6 756 aaKnown RBP8.7□□□□□ -1.02
NEDD9-216ENST00000620854 NOB1Q9ULX3 412 aaKnown RBP8.69□□□□□ -1.02
NEDD9-216ENST00000620854 TRIM27P14373 513 aa8.69□□□□□ -1.02
NEDD9-216ENST00000620854 SSH1Q8WYL5 1049 aa8.69□□□□□ -1.02
NEDD9-216ENST00000620854 ITSN2Q9NZM3 1697 aa8.69□□□□□ -1.02
NEDD9-216ENST00000620854 ANKRD45Q5TZF3 282 aa8.69□□□□□ -1.02
NEDD9-216ENST00000620854 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.68□□□□□ -1.02
NEDD9-216ENST00000620854 INSRP06213 1382 aa8.68□□□□□ -1.02
NEDD9-216ENST00000620854 ASXL1Q8IXJ9 1541 aa8.68□□□□□ -1.02
NEDD9-216ENST00000620854 APBB1O00213 710 aa8.68□□□□□ -1.02
NEDD9-216ENST00000620854 SOX12O15370 315 aa8.68□□□□□ -1.02
NEDD9-216ENST00000620854 FOXD4L5Q5VV16 416 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-216ENST00000620854 TMEM57Q8N5G2 664 aa8.68□□□□□ -1.02
NEDD9-216ENST00000620854 FOXD4L4Q8WXT5 416 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-216ENST00000620854 DDX11L8A8MPP1 907 aa8.68□□□□□ -1.02
NEDD9-216ENST00000620854 CD2BP2O95400 341 aaKnown RBP8.68□□□□□ -1.02
NEDD9-216ENST00000620854 TERF2IPQ9NYB0 399 aa8.68□□□□□ -1.02
NEDD9-216ENST00000620854 SLC52A1Q9NWF4 448 aa8.67□□□□□ -1.02
NEDD9-216ENST00000620854 DDX49Q9Y6V7 483 aaKnown RBP8.67□□□□□ -1.02
NEDD9-216ENST00000620854 PIK3C2GO75747 1445 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 ABCC10Q5T3U5 1492 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 PRDM15P57071 1507 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-216ENST00000620854 SSFA2P28290 1259 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 GBP4Q96PP9 640 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 GGNBP2Q9H3C7 697 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 NLRP1Q9C000 1473 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 NUTM2FA1L443 756 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 FBLN1P23142 703 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 KIAA1211Q6ZU35 1233 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 TAOK2Q9UL54 1235 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 EVC2Q86UK5 1308 aa8.66□□□□□ -1.02
NEDD9-216ENST00000620854 FAM13BQ9NYF5 915 aa8.65□□□□□ -1.02
NEDD9-216ENST00000620854 SYCP2Q9BX26 1530 aa8.65□□□□□ -1.02
NEDD9-216ENST00000620854 POGZQ7Z3K3 1410 aa8.65□□□□□ -1.02
NEDD9-216ENST00000620854 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-216ENST00000620854 MPNDQ8N594 471 aa8.65□□□□□ -1.02
NEDD9-216ENST00000620854 NSD3Q9BZ95 1437 aa8.65□□□□□ -1.02
NEDD9-216ENST00000620854 ADCY10Q96PN6 1610 aa8.65□□□□□ -1.02
NEDD9-216ENST00000620854 ATF7IPQ6VMQ6 1270 aa8.65□□□□□ -1.03
NEDD9-216ENST00000620854 WDR63Q8IWG1 891 aa8.65□□□□□ -1.03
NEDD9-216ENST00000620854 CABP2Q9NPB3 220 aa8.65□□□□□ -1.03
NEDD9-216ENST00000620854 CDC42BPAQ5VT25 1732 aa8.65□□□□□ -1.03
NEDD9-216ENST00000620854 RRP9O43818 475 aaKnown RBP8.64□□□□□ -1.03
NEDD9-216ENST00000620854 NASPP49321 788 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-216ENST00000620854 CHAMP1Q96JM3 812 aa8.64□□□□□ -1.03
NEDD9-216ENST00000620854 DDX19BQ9UMR2 479 aa8.64□□□□□ -1.03
NEDD9-216ENST00000620854 RIPK4P57078 832 aa8.64□□□□□ -1.03
NEDD9-216ENST00000620854 SCAF11Q99590 1463 aaKnown RBP8.64□□□□□ -1.03
NEDD9-216ENST00000620854 SHANK2Q9UPX8 1470 aa8.64□□□□□ -1.03
NEDD9-216ENST00000620854 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-216ENST00000620854 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
NEDD9-216ENST00000620854 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-216ENST00000620854 NGDNQ8NEJ9 315 aaKnown RBP8.64□□□□□ -1.03
NEDD9-216ENST00000620854 THUMPD2Q9BTF0 503 aaKnown RBP8.64□□□□□ -1.03
NEDD9-216ENST00000620854 A0A0G2JS52 829 aa8.64□□□□□ -1.03
NEDD9-216ENST00000620854 MSNP26038 577 aaKnown RBP8.64□□□□□ -1.03
NEDD9-216ENST00000620854 CROCC2H7BZ55 1655 aa8.63□□□□□ -1.03
NEDD9-216ENST00000620854 CAVIN1Q6NZI2 390 aaKnown RBP8.63□□□□□ -1.03
NEDD9-216ENST00000620854 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
NEDD9-216ENST00000620854 ZNF692Q9BU19 519 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-216ENST00000620854 NGEFQ8N5V2 710 aa8.63□□□□□ -1.03
NEDD9-216ENST00000620854 GAS2L2Q8NHY3 880 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms