RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 MYOM2P54296 1465 aa12.69□□□□□ -0.38
CDH23-213ENST00000619887 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
CDH23-213ENST00000619887 NEO1Q92859 1461 aa12.68□□□□□ -0.38
CDH23-213ENST00000619887 SMC4Q9NTJ3 1288 aa12.68□□□□□ -0.38
CDH23-213ENST00000619887 PPP6R1Q9UPN7 881 aa12.68□□□□□ -0.38
CDH23-213ENST00000619887 BLMP54132 1417 aaPredicted RBP12.68□□□□□ -0.38
CDH23-213ENST00000619887 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
CDH23-213ENST00000619887 PDE3AQ14432 1141 aa12.67□□□□□ -0.38
CDH23-213ENST00000619887 FAM161AQ3B820 660 aa12.67□□□□□ -0.38
CDH23-213ENST00000619887 IDI1Q13907 227 aa12.67□□□□□ -0.38
CDH23-213ENST00000619887 PRAM1Q96QH2 718 aa12.67□□□□□ -0.38
CDH23-213ENST00000619887 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
CDH23-213ENST00000619887 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
CDH23-213ENST00000619887 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
CDH23-213ENST00000619887 ABCA9Q8IUA7 1624 aa12.66□□□□□ -0.38
CDH23-213ENST00000619887 SPHKAPQ2M3C7 1700 aa12.66□□□□□ -0.38
CDH23-213ENST00000619887 SBNO2Q9Y2G9 1366 aa12.66□□□□□ -0.38
CDH23-213ENST00000619887 SYNMO15061 1565 aa12.66□□□□□ -0.38
CDH23-213ENST00000619887 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
CDH23-213ENST00000619887 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
CDH23-213ENST00000619887 ZKSCAN2Q63HK3 967 aa12.65□□□□□ -0.38
CDH23-213ENST00000619887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDH23-213ENST00000619887 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
CDH23-213ENST00000619887 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.38
CDH23-213ENST00000619887 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.38
CDH23-213ENST00000619887 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
CDH23-213ENST00000619887 KIF1BO60333 1816 aa12.64□□□□□ -0.39
CDH23-213ENST00000619887 COG6Q9Y2V7 657 aa12.64□□□□□ -0.39
CDH23-213ENST00000619887 POLR3AO14802 1390 aaPredicted RBP12.64□□□□□ -0.39
CDH23-213ENST00000619887 EID1Q9Y6B2 187 aa12.64□□□□□ -0.39
CDH23-213ENST00000619887 ARXQ96QS3 562 aa12.64□□□□□ -0.39
CDH23-213ENST00000619887 EFCAB6Q5THR3 1501 aa12.63□□□□□ -0.39
CDH23-213ENST00000619887 CLTCL1P53675 1640 aa12.63□□□□□ -0.39
CDH23-213ENST00000619887 E9PCH4 1651 aa12.63□□□□□ -0.39
CDH23-213ENST00000619887 CT47B1P0C2W7 299 aaPredicted RBP12.63□□□□□ -0.39
CDH23-213ENST00000619887 WWC1Q8IX03 1113 aa12.63□□□□□ -0.39
CDH23-213ENST00000619887 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
CDH23-213ENST00000619887 COG3Q96JB2 828 aa12.63□□□□□ -0.39
CDH23-213ENST00000619887 ITPRIPQ8IWB1 547 aa12.62□□□□□ -0.39
CDH23-213ENST00000619887 NPATQ14207 1427 aa12.62□□□□□ -0.39
CDH23-213ENST00000619887 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
CDH23-213ENST00000619887 ANKRD36BQ8N2N9 1353 aa12.61□□□□□ -0.39
CDH23-213ENST00000619887 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
CDH23-213ENST00000619887 BACH2Q9BYV9 841 aa12.61□□□□□ -0.39
CDH23-213ENST00000619887 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
CDH23-213ENST00000619887 INO80Q9ULG1 1556 aaPredicted RBP12.61□□□□□ -0.39
CDH23-213ENST00000619887 RIPK4P57078 832 aa12.6□□□□□ -0.39
CDH23-213ENST00000619887 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
CDH23-213ENST00000619887 BCL2L13Q9BXK5 485 aa12.6□□□□□ -0.39
CDH23-213ENST00000619887 DZIP1LQ8IYY4 767 aaKnown RBP12.6□□□□□ -0.39
CDH23-213ENST00000619887 BCAR3O75815 825 aa12.59□□□□□ -0.39
CDH23-213ENST00000619887 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
CDH23-213ENST00000619887 MAP3K4Q9Y6R4 1608 aa12.59□□□□□ -0.39
CDH23-213ENST00000619887 KIF16BQ96L93 1317 aa12.59□□□□□ -0.39
CDH23-213ENST00000619887 DDX19BQ9UMR2 479 aa12.59□□□□□ -0.39
CDH23-213ENST00000619887 PLEKHH1Q9ULM0 1364 aa12.58□□□□□ -0.39
CDH23-213ENST00000619887 CEP152O94986 1710 aa12.58□□□□□ -0.4
CDH23-213ENST00000619887 PANK1Q8TE04 598 aa12.58□□□□□ -0.4
CDH23-213ENST00000619887 ERVK-7P63135 1459 aa12.57□□□□□ -0.4
CDH23-213ENST00000619887 CABP1Q9NZU7 370 aa12.57□□□□□ -0.4
CDH23-213ENST00000619887 UGGT1Q9NYU2 1555 aa12.57□□□□□ -0.4
CDH23-213ENST00000619887 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
CDH23-213ENST00000619887 LMTK2Q8IWU2 1503 aa12.56□□□□□ -0.4
CDH23-213ENST00000619887 ABCC11Q96J66 1382 aa12.56□□□□□ -0.4
CDH23-213ENST00000619887 RNF17Q9BXT8 1623 aaKnown RBP12.56□□□□□ -0.4
CDH23-213ENST00000619887 DEKP35659 375 aaKnown RBP12.56□□□□□ -0.4
CDH23-213ENST00000619887 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
CDH23-213ENST00000619887 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
CDH23-213ENST00000619887 MSH5O43196 834 aa12.55□□□□□ -0.4
CDH23-213ENST00000619887 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
CDH23-213ENST00000619887 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
CDH23-213ENST00000619887 CFAP65Q6ZU64 1925 aaKnown RBP12.55□□□□□ -0.4
CDH23-213ENST00000619887 GNAI1P63096 354 aa12.54□□□□□ -0.4
CDH23-213ENST00000619887 PAK3O75914 559 aaPredicted RBP12.54□□□□□ -0.4
CDH23-213ENST00000619887 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
CDH23-213ENST00000619887 FCHSD2O94868 740 aa12.53□□□□□ -0.4
CDH23-213ENST00000619887 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
CDH23-213ENST00000619887 ABCC3O15438 1527 aa12.53□□□□□ -0.4
CDH23-213ENST00000619887 KIAA1210Q9ULL0 1709 aa12.53□□□□□ -0.4
CDH23-213ENST00000619887 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
CDH23-213ENST00000619887 RARSP54136 660 aaKnown RBP12.52□□□□□ -0.4
CDH23-213ENST00000619887 EXOSC9Q06265 439 aaKnown RBP12.52□□□□□ -0.4
CDH23-213ENST00000619887 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.4
CDH23-213ENST00000619887 NEURL4Q96JN8 1562 aa12.52□□□□□ -0.4
CDH23-213ENST00000619887 DEPDC5O75140 1603 aa12.52□□□□□ -0.41
CDH23-213ENST00000619887 PRKAR2BP31323 418 aa12.52□□□□□ -0.41
CDH23-213ENST00000619887 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
CDH23-213ENST00000619887 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
CDH23-213ENST00000619887 IQGAP1P46940 1657 aa12.51□□□□□ -0.41
CDH23-213ENST00000619887 ADGRB3O60242 1522 aa12.51□□□□□ -0.41
CDH23-213ENST00000619887 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
CDH23-213ENST00000619887 TXNDC2Q86VQ3 553 aa12.51□□□□□ -0.41
CDH23-213ENST00000619887 ARHGAP31Q2M1Z3 1444 aa12.5□□□□□ -0.41
CDH23-213ENST00000619887 YTHDC2Q9H6S0 1430 aaKnown RBP12.5□□□□□ -0.41
CDH23-213ENST00000619887 ABCA6Q8N139 1617 aa12.5□□□□□ -0.41
CDH23-213ENST00000619887 SETBP1Q9Y6X0 1596 aa12.5□□□□□ -0.41
CDH23-213ENST00000619887 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
CDH23-213ENST00000619887 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
CDH23-213ENST00000619887 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
CDH23-213ENST00000619887 MVPQ14764 893 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms