RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
ERCC1-213ENST00000592023 ADGRB1O14514 1584 aa22.19■■□□□ 1.14
ERCC1-213ENST00000592023 DDX17Q92841 729 aaKnown RBP22.17■■□□□ 1.14
ERCC1-213ENST00000592023 LRP6O75581 1613 aa22.17■■□□□ 1.14
ERCC1-213ENST00000592023 FMN2Q9NZ56 1722 aa22.16■■□□□ 1.14
ERCC1-213ENST00000592023 ORAI2Q96SN7 254 aa22.15■■□□□ 1.14
ERCC1-213ENST00000592023 DLC1Q96QB1 1528 aa22.15■■□□□ 1.14
ERCC1-213ENST00000592023 SPATA31A6Q5VVP1 1343 aa22.13■■□□□ 1.13
ERCC1-213ENST00000592023 NUTM2FA1L443 756 aa22.11■■□□□ 1.13
ERCC1-213ENST00000592023 SOCS7O14512 581 aa22.11■■□□□ 1.13
ERCC1-213ENST00000592023 RGS17Q9UGC6 210 aaPredicted RBP22.11■■□□□ 1.13
ERCC1-213ENST00000592023 SAFB2Q14151 953 aaKnown RBP eCLIP22.1■■□□□ 1.13
ERCC1-213ENST00000592023 PRAM1Q96QH2 718 aa22.1■■□□□ 1.13
ERCC1-213ENST00000592023 SIRT1Q96EB6 747 aa22.09■■□□□ 1.13
ERCC1-213ENST00000592023 STAC3Q96MF2 364 aa22.09■■□□□ 1.13
ERCC1-213ENST00000592023 ESCO1Q5FWF5 840 aa22.08■■□□□ 1.13
ERCC1-213ENST00000592023 PNPLA6Q8IY17 1366 aa22.08■■□□□ 1.12
ERCC1-213ENST00000592023 ADGRB2O60241 1585 aa22.08■■□□□ 1.12
ERCC1-213ENST00000592023 ARHGEF28Q8N1W1 1705 aaKnown RBP22.07■■□□□ 1.12
ERCC1-213ENST00000592023 MEX3CQ5U5Q3 659 aaKnown RBP22.07■■□□□ 1.12
ERCC1-213ENST00000592023 LRRC59Q96AG4 307 aaKnown RBP22.07■■□□□ 1.12
ERCC1-213ENST00000592023 TRAK1Q9UPV9 953 aa22.07■■□□□ 1.12
ERCC1-213ENST00000592023 KIF1AQ12756 1690 aa22.07■■□□□ 1.12
ERCC1-213ENST00000592023 NUTM2BA6NNL0 878 aaPredicted RBP22.06■■□□□ 1.12
ERCC1-213ENST00000592023 NUTM2EB1AL46 878 aaPredicted RBP22.06■■□□□ 1.12
ERCC1-213ENST00000592023 NUTM2AQ8IVF1 878 aaPredicted RBP22.06■■□□□ 1.12
ERCC1-213ENST00000592023 POGKQ9P215 609 aa22.06■■□□□ 1.12
ERCC1-213ENST00000592023 KIAA1210Q9ULL0 1709 aa22.06■■□□□ 1.12
ERCC1-213ENST00000592023 SOS2Q07890 1332 aaPredicted RBP22.05■■□□□ 1.12
ERCC1-213ENST00000592023 RGPD8O14715 1765 aaPredicted RBP22.04■■□□□ 1.12
ERCC1-213ENST00000592023 NPHP3Q7Z494 1330 aa22.04■■□□□ 1.12
ERCC1-213ENST00000592023 PXDNQ92626 1479 aa22.03■■□□□ 1.12
ERCC1-213ENST00000592023 USP32Q8NFA0 1604 aa22.02■■□□□ 1.11
ERCC1-213ENST00000592023 XPCQ01831 940 aaPredicted RBP22.01■■□□□ 1.11
ERCC1-213ENST00000592023 POTEAQ6S8J7 498 aa22.01■■□□□ 1.11
ERCC1-213ENST00000592023 FOXO3O43524 673 aa22■■□□□ 1.11
ERCC1-213ENST00000592023 SIN3AQ96ST3 1273 aa22■■□□□ 1.11
ERCC1-213ENST00000592023 MINK1Q8N4C8 1332 aaPredicted RBP22■■□□□ 1.11
ERCC1-213ENST00000592023 COL22A1Q8NFW1 1626 aaPredicted RBP21.99■■□□□ 1.11
ERCC1-213ENST00000592023 HIRIP3Q9BW71 556 aaPredicted RBP21.99■■□□□ 1.11
ERCC1-213ENST00000592023 TRIM26Q12899 539 aaPredicted RBP21.98■■□□□ 1.11
ERCC1-213ENST00000592023 ANKARQ7Z5J8 1434 aa21.97■■□□□ 1.11
ERCC1-213ENST00000592023 NEUROD1Q13562 356 aa21.96■■□□□ 1.11
ERCC1-213ENST00000592023 TULP4Q9NRJ4 1543 aa21.96■■□□□ 1.11
ERCC1-213ENST00000592023 L3MBTL2Q969R5 705 aa21.95■■□□□ 1.1
ERCC1-213ENST00000592023 PHF8Q9UPP1 1060 aa21.94■■□□□ 1.1
ERCC1-213ENST00000592023 EIF3AQ14152 1382 aaKnown RBP21.94■■□□□ 1.1
ERCC1-213ENST00000592023 TRPM1Q7Z4N2 1603 aa21.92■■□□□ 1.1
ERCC1-213ENST00000592023 ADAMTS2O95450 1211 aa21.92■■□□□ 1.1
ERCC1-213ENST00000592023 NBPF1Q3BBV0 1214 aa21.92■■□□□ 1.1
ERCC1-213ENST00000592023 ZNF772Q68DY9 489 aaPredicted RBP21.92■■□□□ 1.1
ERCC1-213ENST00000592023 C8orf37Q96NL8 207 aa21.92■■□□□ 1.1
ERCC1-213ENST00000592023 AFF2P51816 1311 aa21.91■■□□□ 1.1
ERCC1-213ENST00000592023 PRR36Q9H6K5 1346 aa21.9■■□□□ 1.1
ERCC1-213ENST00000592023 ITSN1Q15811 1721 aa21.89■■□□□ 1.1
ERCC1-213ENST00000592023 WASLO00401 505 aaPredicted RBP21.89■■□□□ 1.09
ERCC1-213ENST00000592023 KRT28Q7Z3Y7 464 aa21.89■■□□□ 1.09
ERCC1-213ENST00000592023 TNS3Q68CZ2 1445 aa21.89■■□□□ 1.09
ERCC1-213ENST00000592023 PMFBP1Q8TBY8 1022 aa21.88■■□□□ 1.09
ERCC1-213ENST00000592023 MARF1Q9Y4F3 1742 aaKnown RBP21.88■■□□□ 1.09
ERCC1-213ENST00000592023 ATP7BP35670 1465 aa21.88■■□□□ 1.09
ERCC1-213ENST00000592023 SPATA31A3Q5VYP0 1347 aa21.87■■□□□ 1.09
ERCC1-213ENST00000592023 QRICH2Q9H0J4 1663 aa21.87■■□□□ 1.09
ERCC1-213ENST00000592023 TRPM3Q9HCF6 1732 aaPredicted RBP21.85■■□□□ 1.09
ERCC1-213ENST00000592023 TOPAZ1Q8N9V7 1692 aa21.85■■□□□ 1.09
ERCC1-213ENST00000592023 ABCA3Q99758 1704 aa21.84■■□□□ 1.09
ERCC1-213ENST00000592023 NGLY1Q96IV0 654 aa21.84■■□□□ 1.09
ERCC1-213ENST00000592023 PSME1Q06323 249 aa21.83■■□□□ 1.09
ERCC1-213ENST00000592023 SBNO1A3KN83 1393 aa21.83■■□□□ 1.08
ERCC1-213ENST00000592023 CENPJQ9HC77 1338 aaPredicted RBP21.82■■□□□ 1.08
ERCC1-213ENST00000592023 ROCK2O75116 1388 aaKnown RBP21.82■■□□□ 1.08
ERCC1-213ENST00000592023 TONSLQ96HA7 1378 aa21.81■■□□□ 1.08
ERCC1-213ENST00000592023 ALS2Q96Q42 1657 aa21.8■■□□□ 1.08
ERCC1-213ENST00000592023 GPRASP1Q5JY77 1395 aa21.8■■□□□ 1.08
ERCC1-213ENST00000592023 PLEKHG5O94827 1062 aa21.8■■□□□ 1.08
ERCC1-213ENST00000592023 LMOD2Q6P5Q4 547 aa21.8■■□□□ 1.08
ERCC1-213ENST00000592023 CDK19Q9BWU1 502 aa21.8■■□□□ 1.08
ERCC1-213ENST00000592023 ARHGEF10O15013 1369 aa21.79■■□□□ 1.08
ERCC1-213ENST00000592023 RXRBP28702 533 aa21.79■■□□□ 1.08
ERCC1-213ENST00000592023 NUDT16Q96DE0 195 aaKnown RBP21.79■■□□□ 1.08
ERCC1-213ENST00000592023 NGDNQ8NEJ9 315 aaKnown RBP21.78■■□□□ 1.08
ERCC1-213ENST00000592023 HAP1P54257 671 aaPredicted RBP21.77■■□□□ 1.08
ERCC1-213ENST00000592023 USP21Q9UK80 565 aa21.77■■□□□ 1.08
ERCC1-213ENST00000592023 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.07
ERCC1-213ENST00000592023 NBPF8Q3BBV2 869 aa21.76■■□□□ 1.07
ERCC1-213ENST00000592023 QTRT2Q9H974 415 aaKnown RBP21.76■■□□□ 1.07
ERCC1-213ENST00000592023 CABLES1Q8TDN4 633 aa21.75■■□□□ 1.07
ERCC1-213ENST00000592023 RGS12O14924 1447 aa21.74■■□□□ 1.07
ERCC1-213ENST00000592023 FNBP4Q8N3X1 1017 aaPredicted RBP21.74■■□□□ 1.07
ERCC1-213ENST00000592023 PLCH1Q4KWH8 1693 aa21.73■■□□□ 1.07
ERCC1-213ENST00000592023 RALGAPBQ86X10 1494 aa21.73■■□□□ 1.07
ERCC1-213ENST00000592023 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.73■■□□□ 1.07
ERCC1-213ENST00000592023 SRPK2P78362 688 aaKnown RBP21.73■■□□□ 1.07
ERCC1-213ENST00000592023 ATRNO75882 1429 aa21.72■■□□□ 1.07
ERCC1-213ENST00000592023 CRYBG1Q9Y4K1 1723 aa21.72■■□□□ 1.07
ERCC1-213ENST00000592023 RBM6P78332 1123 aaKnown RBP21.72■■□□□ 1.07
ERCC1-213ENST00000592023 BCL9LQ86UU0 1499 aa21.71■■□□□ 1.07
ERCC1-213ENST00000592023 PAK3O75914 559 aaPredicted RBP21.71■■□□□ 1.07
ERCC1-213ENST00000592023 TRPC5Q9UL62 973 aaPredicted RBP21.71■■□□□ 1.07
ERCC1-213ENST00000592023 CCDC61Q9Y6R9 512 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms