RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 PLEKHH1Q9ULM0 1364 aa24.29■■□□□ 1.48
PKD1-233ENST00000567355 ADGRB1O14514 1584 aa24.29■■□□□ 1.48
PKD1-233ENST00000567355 SOCS7O14512 581 aa24.29■■□□□ 1.48
PKD1-233ENST00000567355 STAC3Q96MF2 364 aa24.28■■□□□ 1.48
PKD1-233ENST00000567355 SPATA31A6Q5VVP1 1343 aa24.26■■□□□ 1.47
PKD1-233ENST00000567355 LRP6O75581 1613 aa24.25■■□□□ 1.47
PKD1-233ENST00000567355 DCAF11Q8TEB1 546 aa24.25■■□□□ 1.47
PKD1-233ENST00000567355 DLC1Q96QB1 1528 aa24.25■■□□□ 1.47
PKD1-233ENST00000567355 ORAI2Q96SN7 254 aa24.24■■□□□ 1.47
PKD1-233ENST00000567355 DDX17Q92841 729 aaKnown RBP24.23■■□□□ 1.47
PKD1-233ENST00000567355 FMN2Q9NZ56 1722 aa24.21■■□□□ 1.47
PKD1-233ENST00000567355 KDM2AQ9Y2K7 1162 aa24.21■■□□□ 1.47
PKD1-233ENST00000567355 LRRC59Q96AG4 307 aaKnown RBP24.2■■□□□ 1.46
PKD1-233ENST00000567355 SOS2Q07890 1332 aaPredicted RBP24.19■■□□□ 1.46
PKD1-233ENST00000567355 PNPLA6Q8IY17 1366 aa24.16■■□□□ 1.46
PKD1-233ENST00000567355 PRAM1Q96QH2 718 aa24.16■■□□□ 1.46
PKD1-233ENST00000567355 ADGRB2O60241 1585 aa24.14■■□□□ 1.45
PKD1-233ENST00000567355 ESCO1Q5FWF5 840 aa24.14■■□□□ 1.45
PKD1-233ENST00000567355 POTEAQ6S8J7 498 aa24.14■■□□□ 1.45
PKD1-233ENST00000567355 PXDNQ92626 1479 aa24.13■■□□□ 1.45
PKD1-233ENST00000567355 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
PKD1-233ENST00000567355 NPHP3Q7Z494 1330 aa24.1■■□□□ 1.45
PKD1-233ENST00000567355 TRAK1Q9UPV9 953 aa24.1■■□□□ 1.45
PKD1-233ENST00000567355 KIF1AQ12756 1690 aa24.1■■□□□ 1.45
PKD1-233ENST00000567355 COL22A1Q8NFW1 1626 aaPredicted RBP24.1■■□□□ 1.45
PKD1-233ENST00000567355 NUTM2FA1L443 756 aa24.09■■□□□ 1.45
PKD1-233ENST00000567355 RGPD8O14715 1765 aaPredicted RBP24.08■■□□□ 1.45
PKD1-233ENST00000567355 ARHGEF28Q8N1W1 1705 aaKnown RBP24.08■■□□□ 1.45
PKD1-233ENST00000567355 USP32Q8NFA0 1604 aa24.07■■□□□ 1.44
PKD1-233ENST00000567355 FOXO3O43524 673 aa24.07■■□□□ 1.44
PKD1-233ENST00000567355 SAFB2Q14151 953 aaKnown RBP eCLIP24.07■■□□□ 1.44
PKD1-233ENST00000567355 POGKQ9P215 609 aa24.07■■□□□ 1.44
PKD1-233ENST00000567355 NUTM2BA6NNL0 878 aaPredicted RBP24.06■■□□□ 1.44
PKD1-233ENST00000567355 NUTM2EB1AL46 878 aaPredicted RBP24.06■■□□□ 1.44
PKD1-233ENST00000567355 NUTM2AQ8IVF1 878 aaPredicted RBP24.06■■□□□ 1.44
PKD1-233ENST00000567355 ANKARQ7Z5J8 1434 aa24.05■■□□□ 1.44
PKD1-233ENST00000567355 MEX3CQ5U5Q3 659 aaKnown RBP24.05■■□□□ 1.44
PKD1-233ENST00000567355 ZNF772Q68DY9 489 aaPredicted RBP24.01■■□□□ 1.43
PKD1-233ENST00000567355 SIN3AQ96ST3 1273 aa24.01■■□□□ 1.43
PKD1-233ENST00000567355 XPCQ01831 940 aaPredicted RBP24■■□□□ 1.43
PKD1-233ENST00000567355 L3MBTL2Q969R5 705 aa24■■□□□ 1.43
PKD1-233ENST00000567355 PHF8Q9UPP1 1060 aa24■■□□□ 1.43
PKD1-233ENST00000567355 HIRIP3Q9BW71 556 aaPredicted RBP23.99■■□□□ 1.43
PKD1-233ENST00000567355 MINK1Q8N4C8 1332 aaPredicted RBP23.99■■□□□ 1.43
PKD1-233ENST00000567355 TULP4Q9NRJ4 1543 aa23.99■■□□□ 1.43
PKD1-233ENST00000567355 TRIM26Q12899 539 aaPredicted RBP23.98■■□□□ 1.43
PKD1-233ENST00000567355 NBPF1Q3BBV0 1214 aa23.98■■□□□ 1.43
PKD1-233ENST00000567355 WASLO00401 505 aaPredicted RBP23.97■■□□□ 1.43
PKD1-233ENST00000567355 AFF2P51816 1311 aa23.97■■□□□ 1.43
PKD1-233ENST00000567355 SPATA31A3Q5VYP0 1347 aa23.97■■□□□ 1.43
PKD1-233ENST00000567355 EIF3AQ14152 1382 aaKnown RBP23.96■■□□□ 1.43
PKD1-233ENST00000567355 PRR36Q9H6K5 1346 aa23.96■■□□□ 1.43
PKD1-233ENST00000567355 KRT28Q7Z3Y7 464 aa23.95■■□□□ 1.42
PKD1-233ENST00000567355 C8orf37Q96NL8 207 aa23.94■■□□□ 1.42
PKD1-233ENST00000567355 SBNO1A3KN83 1393 aa23.92■■□□□ 1.42
PKD1-233ENST00000567355 TRPM1Q7Z4N2 1603 aa23.92■■□□□ 1.42
PKD1-233ENST00000567355 ADAMTS2O95450 1211 aa23.92■■□□□ 1.42
PKD1-233ENST00000567355 MARF1Q9Y4F3 1742 aaKnown RBP23.92■■□□□ 1.42
PKD1-233ENST00000567355 TNS3Q68CZ2 1445 aa23.92■■□□□ 1.42
PKD1-233ENST00000567355 ATP7BP35670 1465 aa23.91■■□□□ 1.42
PKD1-233ENST00000567355 TRPM3Q9HCF6 1732 aaPredicted RBP23.9■■□□□ 1.42
PKD1-233ENST00000567355 PSME1Q06323 249 aa23.9■■□□□ 1.42
PKD1-233ENST00000567355 NEUROD1Q13562 356 aa23.9■■□□□ 1.42
PKD1-233ENST00000567355 PMFBP1Q8TBY8 1022 aa23.9■■□□□ 1.42
PKD1-233ENST00000567355 FNBP4Q8N3X1 1017 aaPredicted RBP23.89■■□□□ 1.41
PKD1-233ENST00000567355 CDK12Q9NYV4 1490 aaPredicted RBP23.88■■□□□ 1.41
PKD1-233ENST00000567355 ITSN1Q15811 1721 aa23.87■■□□□ 1.41
PKD1-233ENST00000567355 RXRBP28702 533 aa23.87■■□□□ 1.41
PKD1-233ENST00000567355 NGLY1Q96IV0 654 aa23.87■■□□□ 1.41
PKD1-233ENST00000567355 TOPAZ1Q8N9V7 1692 aa23.86■■□□□ 1.41
PKD1-233ENST00000567355 NUDT16Q96DE0 195 aaKnown RBP23.85■■□□□ 1.41
PKD1-233ENST00000567355 CDK19Q9BWU1 502 aa23.85■■□□□ 1.41
PKD1-233ENST00000567355 ALS2Q96Q42 1657 aa23.85■■□□□ 1.41
PKD1-233ENST00000567355 QTRT2Q9H974 415 aaKnown RBP23.84■■□□□ 1.41
PKD1-233ENST00000567355 ABCA3Q99758 1704 aa23.84■■□□□ 1.41
PKD1-233ENST00000567355 CENPJQ9HC77 1338 aaPredicted RBP23.84■■□□□ 1.41
PKD1-233ENST00000567355 ARHGEF10O15013 1369 aa23.83■■□□□ 1.41
PKD1-233ENST00000567355 QRICH2Q9H0J4 1663 aa23.83■■□□□ 1.4
PKD1-233ENST00000567355 BCL9LQ86UU0 1499 aa23.82■■□□□ 1.4
PKD1-233ENST00000567355 RBM6P78332 1123 aaKnown RBP23.81■■□□□ 1.4
PKD1-233ENST00000567355 USP21Q9UK80 565 aa23.81■■□□□ 1.4
PKD1-233ENST00000567355 ATRNO75882 1429 aa23.81■■□□□ 1.4
PKD1-233ENST00000567355 GPRASP1Q5JY77 1395 aa23.8■■□□□ 1.4
PKD1-233ENST00000567355 NBPF8Q3BBV2 869 aa23.8■■□□□ 1.4
PKD1-233ENST00000567355 POLR3AO14802 1390 aaPredicted RBP23.79■■□□□ 1.4
PKD1-233ENST00000567355 SLIT2O94813 1529 aa23.79■■□□□ 1.4
PKD1-233ENST00000567355 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.79■■□□□ 1.4
PKD1-233ENST00000567355 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
PKD1-233ENST00000567355 ROCK2O75116 1388 aaKnown RBP23.78■■□□□ 1.4
PKD1-233ENST00000567355 RGS12O14924 1447 aa23.77■■□□□ 1.4
PKD1-233ENST00000567355 PLEKHG3A1L390 1219 aa23.77■■□□□ 1.4
PKD1-233ENST00000567355 NGDNQ8NEJ9 315 aaKnown RBP23.77■■□□□ 1.4
PKD1-233ENST00000567355 CABLES1Q8TDN4 633 aa23.77■■□□□ 1.4
PKD1-233ENST00000567355 TRPC5Q9UL62 973 aaPredicted RBP23.77■■□□□ 1.4
PKD1-233ENST00000567355 CRYBG1Q9Y4K1 1723 aa23.76■■□□□ 1.39
PKD1-233ENST00000567355 LMOD2Q6P5Q4 547 aa23.73■■□□□ 1.39
PKD1-233ENST00000567355 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
PKD1-233ENST00000567355 ACEP12821 1306 aa23.72■■□□□ 1.39
PKD1-233ENST00000567355 RALGAPBQ86X10 1494 aa23.72■■□□□ 1.39
PKD1-233ENST00000567355 PLCH1Q4KWH8 1693 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms