RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 C1orf167Q5SNV9 1468 aa18.74■□□□□ 0.59
CTDSPL2-209ENST00000560620 NUTM2FA1L443 756 aa18.74■□□□□ 0.59
CTDSPL2-209ENST00000560620 PRAM1Q96QH2 718 aa18.74■□□□□ 0.59
CTDSPL2-209ENST00000560620 AHDC1Q5TGY3 1603 aaPredicted RBP18.71■□□□□ 0.59
CTDSPL2-209ENST00000560620 JCADQ9P266 1359 aa18.71■□□□□ 0.59
CTDSPL2-209ENST00000560620 ESCO1Q5FWF5 840 aa18.71■□□□□ 0.59
CTDSPL2-209ENST00000560620 DDX17Q92841 729 aaKnown RBP18.71■□□□□ 0.59
CTDSPL2-209ENST00000560620 SIRT1Q96EB6 747 aa18.71■□□□□ 0.59
CTDSPL2-209ENST00000560620 ORAI2Q96SN7 254 aa18.71■□□□□ 0.59
CTDSPL2-209ENST00000560620 CDC42BPGQ6DT37 1551 aa18.71■□□□□ 0.59
CTDSPL2-209ENST00000560620 COL16A1Q07092 1604 aaPredicted RBP18.71■□□□□ 0.58
CTDSPL2-209ENST00000560620 ADGRB1O14514 1584 aa18.69■□□□□ 0.58
CTDSPL2-209ENST00000560620 L3MBTL2Q969R5 705 aa18.68■□□□□ 0.58
CTDSPL2-209ENST00000560620 DLC1Q96QB1 1528 aa18.66■□□□□ 0.58
CTDSPL2-209ENST00000560620 LRRC59Q96AG4 307 aaKnown RBP18.66■□□□□ 0.58
CTDSPL2-209ENST00000560620 NHSL1Q5SYE7 1610 aa18.66■□□□□ 0.58
CTDSPL2-209ENST00000560620 MEX3CQ5U5Q3 659 aaKnown RBP18.65■□□□□ 0.58
CTDSPL2-209ENST00000560620 ILDR2Q71H61 639 aa18.65■□□□□ 0.58
CTDSPL2-209ENST00000560620 HIRIP3Q9BW71 556 aaPredicted RBP18.65■□□□□ 0.58
CTDSPL2-209ENST00000560620 MINK1Q8N4C8 1332 aaPredicted RBP18.65■□□□□ 0.58
CTDSPL2-209ENST00000560620 NUTM2BA6NNL0 878 aaPredicted RBP18.63■□□□□ 0.57
CTDSPL2-209ENST00000560620 NUTM2EB1AL46 878 aaPredicted RBP18.63■□□□□ 0.57
CTDSPL2-209ENST00000560620 NUTM2AQ8IVF1 878 aaPredicted RBP18.63■□□□□ 0.57
CTDSPL2-209ENST00000560620 SPATA31A6Q5VVP1 1343 aa18.63■□□□□ 0.57
CTDSPL2-209ENST00000560620 FMN2Q9NZ56 1722 aa18.63■□□□□ 0.57
CTDSPL2-209ENST00000560620 FOXO3O43524 673 aa18.62■□□□□ 0.57
CTDSPL2-209ENST00000560620 NBPF1Q3BBV0 1214 aa18.62■□□□□ 0.57
CTDSPL2-209ENST00000560620 PCGF6Q9BYE7 350 aa18.62■□□□□ 0.57
CTDSPL2-209ENST00000560620 NPHP3Q7Z494 1330 aa18.62■□□□□ 0.57
CTDSPL2-209ENST00000560620 KIAA1210Q9ULL0 1709 aa18.62■□□□□ 0.57
CTDSPL2-209ENST00000560620 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
CTDSPL2-209ENST00000560620 TONSLQ96HA7 1378 aa18.6■□□□□ 0.57
CTDSPL2-209ENST00000560620 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
CTDSPL2-209ENST00000560620 ARHGEF28Q8N1W1 1705 aaKnown RBP18.59■□□□□ 0.57
CTDSPL2-209ENST00000560620 RGPD8O14715 1765 aaPredicted RBP18.58■□□□□ 0.56
CTDSPL2-209ENST00000560620 SOS2Q07890 1332 aaPredicted RBP18.57■□□□□ 0.56
CTDSPL2-209ENST00000560620 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
CTDSPL2-209ENST00000560620 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
CTDSPL2-209ENST00000560620 PNPLA6Q8IY17 1366 aa18.55■□□□□ 0.56
CTDSPL2-209ENST00000560620 ADGRB2O60241 1585 aa18.55■□□□□ 0.56
CTDSPL2-209ENST00000560620 KIF1AQ12756 1690 aa18.55■□□□□ 0.56
CTDSPL2-209ENST00000560620 WASLO00401 505 aaPredicted RBP18.55■□□□□ 0.56
CTDSPL2-209ENST00000560620 PMFBP1Q8TBY8 1022 aa18.55■□□□□ 0.56
CTDSPL2-209ENST00000560620 LRP6O75581 1613 aa18.55■□□□□ 0.56
CTDSPL2-209ENST00000560620 ROCK2O75116 1388 aaKnown RBP18.55■□□□□ 0.56
CTDSPL2-209ENST00000560620 PSME1Q06323 249 aa18.53■□□□□ 0.56
CTDSPL2-209ENST00000560620 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
CTDSPL2-209ENST00000560620 ANKARQ7Z5J8 1434 aa18.53■□□□□ 0.56
CTDSPL2-209ENST00000560620 RGS17Q9UGC6 210 aaPredicted RBP18.53■□□□□ 0.56
CTDSPL2-209ENST00000560620 TRPM1Q7Z4N2 1603 aa18.52■□□□□ 0.56
CTDSPL2-209ENST00000560620 PXDNQ92626 1479 aa18.52■□□□□ 0.56
CTDSPL2-209ENST00000560620 CENPJQ9HC77 1338 aaPredicted RBP18.51■□□□□ 0.55
CTDSPL2-209ENST00000560620 TULP4Q9NRJ4 1543 aa18.51■□□□□ 0.55
CTDSPL2-209ENST00000560620 ADAMTS2O95450 1211 aa18.51■□□□□ 0.55
CTDSPL2-209ENST00000560620 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
CTDSPL2-209ENST00000560620 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
CTDSPL2-209ENST00000560620 C8orf37Q96NL8 207 aa18.5■□□□□ 0.55
CTDSPL2-209ENST00000560620 CDK19Q9BWU1 502 aa18.5■□□□□ 0.55
CTDSPL2-209ENST00000560620 PLEKHG5O94827 1062 aa18.49■□□□□ 0.55
CTDSPL2-209ENST00000560620 NBPF8Q3BBV2 869 aa18.49■□□□□ 0.55
CTDSPL2-209ENST00000560620 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
CTDSPL2-209ENST00000560620 SRPK2P78362 688 aaKnown RBP18.48■□□□□ 0.55
CTDSPL2-209ENST00000560620 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
CTDSPL2-209ENST00000560620 NUDT16Q96DE0 195 aaKnown RBP18.48■□□□□ 0.55
CTDSPL2-209ENST00000560620 GPRASP1Q5JY77 1395 aa18.47■□□□□ 0.55
CTDSPL2-209ENST00000560620 HAP1P54257 671 aaPredicted RBP18.47■□□□□ 0.55
CTDSPL2-209ENST00000560620 ZNF772Q68DY9 489 aaPredicted RBP18.47■□□□□ 0.55
CTDSPL2-209ENST00000560620 POTEAQ6S8J7 498 aa18.47■□□□□ 0.55
CTDSPL2-209ENST00000560620 QRICH2Q9H0J4 1663 aa18.47■□□□□ 0.55
CTDSPL2-209ENST00000560620 SOCS7O14512 581 aa18.46■□□□□ 0.55
CTDSPL2-209ENST00000560620 NGLY1Q96IV0 654 aa18.46■□□□□ 0.55
CTDSPL2-209ENST00000560620 CARD11Q9BXL7 1154 aa18.46■□□□□ 0.55
CTDSPL2-209ENST00000560620 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
CTDSPL2-209ENST00000560620 AFF2P51816 1311 aa18.45■□□□□ 0.54
CTDSPL2-209ENST00000560620 ITSN1Q15811 1721 aa18.44■□□□□ 0.54
CTDSPL2-209ENST00000560620 PAK3O75914 559 aaPredicted RBP18.44■□□□□ 0.54
CTDSPL2-209ENST00000560620 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
CTDSPL2-209ENST00000560620 COL22A1Q8NFW1 1626 aaPredicted RBP18.43■□□□□ 0.54
CTDSPL2-209ENST00000560620 CABP2Q9NPB3 220 aa18.43■□□□□ 0.54
CTDSPL2-209ENST00000560620 ATP7BP35670 1465 aa18.43■□□□□ 0.54
CTDSPL2-209ENST00000560620 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
CTDSPL2-209ENST00000560620 CCER1Q8TC90 406 aaPredicted RBP18.41■□□□□ 0.54
CTDSPL2-209ENST00000560620 SBNO1A3KN83 1393 aa18.41■□□□□ 0.54
CTDSPL2-209ENST00000560620 EVC2Q86UK5 1308 aa18.4■□□□□ 0.54
CTDSPL2-209ENST00000560620 ARHGEF10O15013 1369 aa18.4■□□□□ 0.54
CTDSPL2-209ENST00000560620 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.54
CTDSPL2-209ENST00000560620 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.53
CTDSPL2-209ENST00000560620 RXRBP28702 533 aa18.37■□□□□ 0.53
CTDSPL2-209ENST00000560620 USP21Q9UK80 565 aa18.37■□□□□ 0.53
CTDSPL2-209ENST00000560620 ACEP12821 1306 aa18.37■□□□□ 0.53
CTDSPL2-209ENST00000560620 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
CTDSPL2-209ENST00000560620 PPIP5K1Q6PFW1 1433 aa18.37■□□□□ 0.53
CTDSPL2-209ENST00000560620 TOPAZ1Q8N9V7 1692 aa18.36■□□□□ 0.53
CTDSPL2-209ENST00000560620 QTRT2Q9H974 415 aaKnown RBP18.36■□□□□ 0.53
CTDSPL2-209ENST00000560620 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
CTDSPL2-209ENST00000560620 PLEKHG3A1L390 1219 aa18.34■□□□□ 0.53
CTDSPL2-209ENST00000560620 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
CTDSPL2-209ENST00000560620 MARF1Q9Y4F3 1742 aaKnown RBP18.34■□□□□ 0.53
CTDSPL2-209ENST00000560620 POLR3AO14802 1390 aaPredicted RBP18.32■□□□□ 0.52
CTDSPL2-209ENST00000560620 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms