RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
CTDSPL2-208ENST00000559793 FAM135AQ9P2D6 1515 aa12.82□□□□□ -0.36
CTDSPL2-208ENST00000559793 CFAP65Q6ZU64 1925 aaKnown RBP12.82□□□□□ -0.36
CTDSPL2-208ENST00000559793 UGGT1Q9NYU2 1555 aa12.81□□□□□ -0.36
CTDSPL2-208ENST00000559793 NPHP4O75161 1426 aaPredicted RBP12.81□□□□□ -0.36
CTDSPL2-208ENST00000559793 SPRYD3Q8NCJ5 442 aa12.81□□□□□ -0.36
CTDSPL2-208ENST00000559793 ARHGEF5Q12774 1597 aa12.8□□□□□ -0.36
CTDSPL2-208ENST00000559793 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
CTDSPL2-208ENST00000559793 MED1Q15648 1581 aaPredicted RBP12.79□□□□□ -0.36
CTDSPL2-208ENST00000559793 DEPDC5O75140 1603 aa12.79□□□□□ -0.36
CTDSPL2-208ENST00000559793 STRCP1A6NGW2 1772 aa12.79□□□□□ -0.36
CTDSPL2-208ENST00000559793 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
CTDSPL2-208ENST00000559793 KANK4Q5T7N3 995 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL2-208ENST00000559793 ABCC3O15438 1527 aa12.76□□□□□ -0.37
CTDSPL2-208ENST00000559793 RNF17Q9BXT8 1623 aaKnown RBP12.76□□□□□ -0.37
CTDSPL2-208ENST00000559793 IQGAP1P46940 1657 aa12.76□□□□□ -0.37
CTDSPL2-208ENST00000559793 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
CTDSPL2-208ENST00000559793 LRRC7Q96NW7 1537 aa12.75□□□□□ -0.37
CTDSPL2-208ENST00000559793 LRRC9Q6ZRR7 1453 aa12.74□□□□□ -0.37
CTDSPL2-208ENST00000559793 KIF3CO14782 793 aa12.74□□□□□ -0.37
CTDSPL2-208ENST00000559793 LTKP29376 864 aa12.74□□□□□ -0.37
CTDSPL2-208ENST00000559793 MAST1Q9Y2H9 1570 aa12.73□□□□□ -0.37
CTDSPL2-208ENST00000559793 ERVK-7P63135 1459 aa12.73□□□□□ -0.37
CTDSPL2-208ENST00000559793 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
CTDSPL2-208ENST00000559793 C2orf72A6NCS6 295 aa12.72□□□□□ -0.37
CTDSPL2-208ENST00000559793 TXNDC2Q86VQ3 553 aa12.72□□□□□ -0.37
CTDSPL2-208ENST00000559793 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
CTDSPL2-208ENST00000559793 MROH1Q8NDA8 1641 aa12.72□□□□□ -0.37
CTDSPL2-208ENST00000559793 CEP152O94986 1710 aa12.71□□□□□ -0.37
CTDSPL2-208ENST00000559793 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.37
CTDSPL2-208ENST00000559793 SNPHO15079 494 aa12.71□□□□□ -0.37
CTDSPL2-208ENST00000559793 EIF2AK4Q9P2K8 1649 aaKnown RBP12.7□□□□□ -0.38
CTDSPL2-208ENST00000559793 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
CTDSPL2-208ENST00000559793 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
CTDSPL2-208ENST00000559793 RGS17Q9UGC6 210 aaPredicted RBP12.69□□□□□ -0.38
CTDSPL2-208ENST00000559793 SCAF11Q99590 1463 aaKnown RBP12.68□□□□□ -0.38
CTDSPL2-208ENST00000559793 ARHGAP23Q9P227 1491 aa12.68□□□□□ -0.38
CTDSPL2-208ENST00000559793 XIRP1Q702N8 1843 aaKnown RBP12.68□□□□□ -0.38
CTDSPL2-208ENST00000559793 RRP7BPQ9NSQ0 103 aa12.68□□□□□ -0.38
CTDSPL2-208ENST00000559793 MYOM3Q5VTT5 1437 aa12.68□□□□□ -0.38
CTDSPL2-208ENST00000559793 DUOX2Q9NRD8 1548 aa12.67□□□□□ -0.38
CTDSPL2-208ENST00000559793 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
CTDSPL2-208ENST00000559793 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
CTDSPL2-208ENST00000559793 SLIT1O75093 1534 aa12.67□□□□□ -0.38
CTDSPL2-208ENST00000559793 SYNMO15061 1565 aa12.66□□□□□ -0.38
CTDSPL2-208ENST00000559793 ARHGAP31Q2M1Z3 1444 aa12.66□□□□□ -0.38
CTDSPL2-208ENST00000559793 EID1Q9Y6B2 187 aa12.66□□□□□ -0.38
CTDSPL2-208ENST00000559793 MAP3K1Q13233 1512 aa12.66□□□□□ -0.38
CTDSPL2-208ENST00000559793 ABCC5O15440 1437 aa12.65□□□□□ -0.38
CTDSPL2-208ENST00000559793 HOXB3P14651 431 aaPredicted RBP12.65□□□□□ -0.38
CTDSPL2-208ENST00000559793 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
CTDSPL2-208ENST00000559793 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
CTDSPL2-208ENST00000559793 KIF15Q9NS87 1388 aa12.65□□□□□ -0.38
CTDSPL2-208ENST00000559793 IDI1Q13907 227 aa12.64□□□□□ -0.39
CTDSPL2-208ENST00000559793 TMEM2Q9UHN6 1383 aa12.64□□□□□ -0.39
CTDSPL2-208ENST00000559793 PIK3C2BO00750 1634 aa12.63□□□□□ -0.39
CTDSPL2-208ENST00000559793 PDE4AP27815 886 aa12.63□□□□□ -0.39
CTDSPL2-208ENST00000559793 LCE2DQ5TA82 110 aaPredicted RBP12.63□□□□□ -0.39
CTDSPL2-208ENST00000559793 KCNA6P17658 529 aa12.62□□□□□ -0.39
CTDSPL2-208ENST00000559793 FOXK1P85037 733 aa12.62□□□□□ -0.39
CTDSPL2-208ENST00000559793 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
CTDSPL2-208ENST00000559793 SLC26A8Q96RN1 970 aa12.62□□□□□ -0.39
CTDSPL2-208ENST00000559793 PRDM15P57071 1507 aaPredicted RBP12.62□□□□□ -0.39
CTDSPL2-208ENST00000559793 FAM135BQ49AJ0 1406 aa12.62□□□□□ -0.39
CTDSPL2-208ENST00000559793 ERBINQ96RT1 1412 aa12.62□□□□□ -0.39
CTDSPL2-208ENST00000559793 ST18O60284 1047 aa12.61□□□□□ -0.39
CTDSPL2-208ENST00000559793 DOK7Q18PE1 504 aa12.61□□□□□ -0.39
CTDSPL2-208ENST00000559793 TMEM94Q12767 1356 aa12.6□□□□□ -0.39
CTDSPL2-208ENST00000559793 PROSER2Q86WR7 435 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-208ENST00000559793 CHIC2Q9UKJ5 165 aa12.6□□□□□ -0.39
CTDSPL2-208ENST00000559793 CROCC2H7BZ55 1655 aa12.59□□□□□ -0.39
CTDSPL2-208ENST00000559793 DSG2Q14126 1118 aa12.59□□□□□ -0.39
CTDSPL2-208ENST00000559793 POTEAQ6S8J7 498 aa12.59□□□□□ -0.39
CTDSPL2-208ENST00000559793 DAPK1P53355 1430 aa12.59□□□□□ -0.39
CTDSPL2-208ENST00000559793 PTPN23Q9H3S7 1636 aa12.59□□□□□ -0.39
CTDSPL2-208ENST00000559793 KANK1Q14678 1352 aa12.58□□□□□ -0.4
CTDSPL2-208ENST00000559793 TET3O43151 1660 aa12.58□□□□□ -0.4
CTDSPL2-208ENST00000559793 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
CTDSPL2-208ENST00000559793 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
CTDSPL2-208ENST00000559793 PLPP6Q8IY26 295 aa12.57□□□□□ -0.4
CTDSPL2-208ENST00000559793 KDM5AP29375 1690 aaKnown RBP12.57□□□□□ -0.4
CTDSPL2-208ENST00000559793 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
CTDSPL2-208ENST00000559793 LMTK2Q8IWU2 1503 aa12.56□□□□□ -0.4
CTDSPL2-208ENST00000559793 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
CTDSPL2-208ENST00000559793 NOS1P29475 1434 aa12.55□□□□□ -0.4
CTDSPL2-208ENST00000559793 SLC52A1Q9NWF4 448 aa12.55□□□□□ -0.4
CTDSPL2-208ENST00000559793 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
CTDSPL2-208ENST00000559793 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
CTDSPL2-208ENST00000559793 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
CTDSPL2-208ENST00000559793 MFSD10Q14728 455 aa12.54□□□□□ -0.4
CTDSPL2-208ENST00000559793 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
CTDSPL2-208ENST00000559793 BCANQ96GW7 911 aa12.54□□□□□ -0.4
CTDSPL2-208ENST00000559793 SLC34A2O95436 690 aa12.53□□□□□ -0.4
CTDSPL2-208ENST00000559793 PPP1R15BQ5SWA1 713 aa12.53□□□□□ -0.4
CTDSPL2-208ENST00000559793 SLAIN2Q9P270 581 aa12.53□□□□□ -0.4
CTDSPL2-208ENST00000559793 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.41
CTDSPL2-208ENST00000559793 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
CTDSPL2-208ENST00000559793 TSHZ2Q9NRE2 1034 aa12.52□□□□□ -0.41
CTDSPL2-208ENST00000559793 MYO5BQ9ULV0 1848 aa12.51□□□□□ -0.41
CTDSPL2-208ENST00000559793 HOXB1P14653 301 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms