RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 FBLN1P23142 703 aa11.12□□□□□ -0.63
SYNE2-217ENST00000555022 TMEM57Q8N5G2 664 aa11.12□□□□□ -0.63
SYNE2-217ENST00000555022 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
SYNE2-217ENST00000555022 ZKSCAN2Q63HK3 967 aa11.12□□□□□ -0.63
SYNE2-217ENST00000555022 NOB1Q9ULX3 412 aaKnown RBP11.12□□□□□ -0.63
SYNE2-217ENST00000555022 TRMT2AQ8IZ69 625 aaKnown RBP11.11□□□□□ -0.63
SYNE2-217ENST00000555022 GBP4Q96PP9 640 aa11.11□□□□□ -0.63
SYNE2-217ENST00000555022 THUMPD2Q9BTF0 503 aaKnown RBP11.11□□□□□ -0.63
SYNE2-217ENST00000555022 MRC2Q9UBG0 1479 aa11.11□□□□□ -0.63
SYNE2-217ENST00000555022 TRIM27P14373 513 aa11.11□□□□□ -0.63
SYNE2-217ENST00000555022 DNTTIP2Q5QJE6 756 aaKnown RBP11.11□□□□□ -0.63
SYNE2-217ENST00000555022 SSH1Q8WYL5 1049 aa11.11□□□□□ -0.63
SYNE2-217ENST00000555022 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
SYNE2-217ENST00000555022 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
SYNE2-217ENST00000555022 JPH4Q96JJ6 628 aa11.1□□□□□ -0.63
SYNE2-217ENST00000555022 UQCRHLA0A096LP55 91 aa11.1□□□□□ -0.63
SYNE2-217ENST00000555022 IGSF3O75054 1194 aa11.1□□□□□ -0.63
SYNE2-217ENST00000555022 UQCRHP07919 91 aa11.1□□□□□ -0.63
SYNE2-217ENST00000555022 RIPK4P57078 832 aa11.09□□□□□ -0.63
SYNE2-217ENST00000555022 PLEKHH2Q8IVE3 1493 aa11.09□□□□□ -0.63
SYNE2-217ENST00000555022 C17orf53Q8N3J3 647 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-217ENST00000555022 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-217ENST00000555022 PRPF40AO75400 957 aaKnown RBP11.08□□□□□ -0.64
SYNE2-217ENST00000555022 RUNDC1Q96C34 613 aa11.08□□□□□ -0.64
SYNE2-217ENST00000555022 ZNF692Q9BU19 519 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-217ENST00000555022 WDR7Q9Y4E6 1490 aa11.08□□□□□ -0.64
SYNE2-217ENST00000555022 KDM5DQ9BY66 1539 aa11.08□□□□□ -0.64
SYNE2-217ENST00000555022 PLA2R1Q13018 1463 aa11.08□□□□□ -0.64
SYNE2-217ENST00000555022 ATAD2Q6PL18 1390 aa11.08□□□□□ -0.64
SYNE2-217ENST00000555022 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
SYNE2-217ENST00000555022 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
SYNE2-217ENST00000555022 INSRP06213 1382 aa11.07□□□□□ -0.64
SYNE2-217ENST00000555022 GOLGA6L22H0YM25 854 aa11.07□□□□□ -0.64
SYNE2-217ENST00000555022 CDCA8Q53HL2 280 aa11.07□□□□□ -0.64
SYNE2-217ENST00000555022 GGNBP2Q9H3C7 697 aa11.07□□□□□ -0.64
SYNE2-217ENST00000555022 STK26Q9P289 416 aa11.07□□□□□ -0.64
SYNE2-217ENST00000555022 DISP1Q96F81 1524 aa11.06□□□□□ -0.64
SYNE2-217ENST00000555022 E9PCH4 1651 aa11.06□□□□□ -0.64
SYNE2-217ENST00000555022 ZSCAN30Q86W11 494 aa11.06□□□□□ -0.64
SYNE2-217ENST00000555022 RBSNQ9H1K0 784 aa11.06□□□□□ -0.64
SYNE2-217ENST00000555022 ARHGEF12Q9NZN5 1544 aa11.05□□□□□ -0.64
SYNE2-217ENST00000555022 SYCE3A1L190 88 aa11.05□□□□□ -0.64
SYNE2-217ENST00000555022 ZGPATQ8N5A5 531 aaKnown RBP11.05□□□□□ -0.64
SYNE2-217ENST00000555022 GDPD2Q9HCC8 539 aa11.05□□□□□ -0.64
SYNE2-217ENST00000555022 PRIM1P49642 420 aaKnown RBP11.05□□□□□ -0.64
SYNE2-217ENST00000555022 CALD1Q05682 793 aaKnown RBP11.05□□□□□ -0.64
SYNE2-217ENST00000555022 GPRASP1Q5JY77 1395 aa11.05□□□□□ -0.64
SYNE2-217ENST00000555022 ADGRF5Q8IZF2 1346 aa11.05□□□□□ -0.64
SYNE2-217ENST00000555022 BAG4O95429 457 aaKnown RBP11.05□□□□□ -0.64
SYNE2-217ENST00000555022 TPM2P07951 284 aa11.05□□□□□ -0.64
SYNE2-217ENST00000555022 C16orf71Q8IYS4 520 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-217ENST00000555022 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
SYNE2-217ENST00000555022 PDCL3Q9H2J4 239 aa11.04□□□□□ -0.64
SYNE2-217ENST00000555022 TBC1D9Q6ZT07 1266 aa11.04□□□□□ -0.64
SYNE2-217ENST00000555022 NSFL1CQ9UNZ2 370 aaKnown RBP11.04□□□□□ -0.64
SYNE2-217ENST00000555022 NSD3Q9BZ95 1437 aa11.04□□□□□ -0.64
SYNE2-217ENST00000555022 AK9Q5TCS8 1911 aa11.03□□□□□ -0.64
SYNE2-217ENST00000555022 RAPGEF6Q8TEU7 1601 aa11.03□□□□□ -0.64
SYNE2-217ENST00000555022 K7ELQ4 463 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-217ENST00000555022 RAB3GAP1Q15042 981 aa11.03□□□□□ -0.64
SYNE2-217ENST00000555022 OTUD7AQ8TE49 926 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-217ENST00000555022 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
SYNE2-217ENST00000555022 ASXL1Q8IXJ9 1541 aa11.03□□□□□ -0.64
SYNE2-217ENST00000555022 SMARCA5O60264 1052 aaPredicted RBP11.02□□□□□ -0.64
SYNE2-217ENST00000555022 CBX1P83916 185 aa11.02□□□□□ -0.64
SYNE2-217ENST00000555022 CCDC173Q0VFZ6 552 aa11.02□□□□□ -0.64
SYNE2-217ENST00000555022 TSHZ3Q63HK5 1081 aa11.02□□□□□ -0.64
SYNE2-217ENST00000555022 CHD1LQ86WJ1 897 aa11.02□□□□□ -0.64
SYNE2-217ENST00000555022 CFAP53Q96M91 514 aa11.02□□□□□ -0.64
SYNE2-217ENST00000555022 ATF7IPQ6VMQ6 1270 aa11.02□□□□□ -0.65
SYNE2-217ENST00000555022 TRPM1Q7Z4N2 1603 aa11.02□□□□□ -0.65
SYNE2-217ENST00000555022 HMOX1P09601 288 aa11.02□□□□□ -0.65
SYNE2-217ENST00000555022 ZSCAN23Q3MJ62 389 aa11.02□□□□□ -0.65
SYNE2-217ENST00000555022 RTEL1-TNFRSF6BF6WH68 1400 aa11.02□□□□□ -0.65
SYNE2-217ENST00000555022 CEP170Q5SW79 1584 aa11.01□□□□□ -0.65
SYNE2-217ENST00000555022 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
SYNE2-217ENST00000555022 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-217ENST00000555022 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
SYNE2-217ENST00000555022 KIF3BO15066 747 aa11□□□□□ -0.65
SYNE2-217ENST00000555022 ADGRL2O95490 1459 aa11□□□□□ -0.65
SYNE2-217ENST00000555022 OFD1O75665 1012 aa11□□□□□ -0.65
SYNE2-217ENST00000555022 KIF2CQ99661 725 aa11□□□□□ -0.65
SYNE2-217ENST00000555022 DDX19BQ9UMR2 479 aa11□□□□□ -0.65
SYNE2-217ENST00000555022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
SYNE2-217ENST00000555022 KIAA0556O60303 1618 aa11□□□□□ -0.65
SYNE2-217ENST00000555022 SMC5Q8IY18 1101 aa10.98□□□□□ -0.65
SYNE2-217ENST00000555022 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
SYNE2-217ENST00000555022 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
SYNE2-217ENST00000555022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.98□□□□□ -0.65
SYNE2-217ENST00000555022 MAGI1Q96QZ7 1491 aaPredicted RBP10.98□□□□□ -0.65
SYNE2-217ENST00000555022 PIK3C2GO75747 1445 aa10.98□□□□□ -0.65
SYNE2-217ENST00000555022 TSPYL6Q8N831 410 aa10.97□□□□□ -0.65
SYNE2-217ENST00000555022 SRPK2P78362 688 aaKnown RBP10.97□□□□□ -0.65
SYNE2-217ENST00000555022 SKOR2Q2VWA4 1001 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-217ENST00000555022 GPT2Q8TD30 523 aa10.97□□□□□ -0.65
SYNE2-217ENST00000555022 CHMP3Q9Y3E7 222 aa10.97□□□□□ -0.65
SYNE2-217ENST00000555022 IFT140Q96RY7 1462 aa10.97□□□□□ -0.65
SYNE2-217ENST00000555022 ADCY10Q96PN6 1610 aa10.96□□□□□ -0.65
SYNE2-217ENST00000555022 NUCB1Q02818 461 aa10.96□□□□□ -0.65
SYNE2-217ENST00000555022 PRDM15P57071 1507 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms