RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 SYCP2Q9BX26 1530 aa17.36■□□□□ 0.37
TSPAN17-208ENST00000514705 ARHGEF12Q9NZN5 1544 aa17.36■□□□□ 0.37
TSPAN17-208ENST00000514705 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
TSPAN17-208ENST00000514705 PTMAP06454 111 aaKnown RBP17.35■□□□□ 0.37
TSPAN17-208ENST00000514705 MRE11P49959 708 aa17.35■□□□□ 0.37
TSPAN17-208ENST00000514705 DDX49Q9Y6V7 483 aaKnown RBP17.35■□□□□ 0.37
TSPAN17-208ENST00000514705 TRAPPC8Q9Y2L5 1435 aa17.35■□□□□ 0.37
TSPAN17-208ENST00000514705 MVPQ14764 893 aaKnown RBP17.34■□□□□ 0.37
TSPAN17-208ENST00000514705 PANK2Q9BZ23 570 aa17.34■□□□□ 0.37
TSPAN17-208ENST00000514705 MBD5Q9P267 1494 aa17.34■□□□□ 0.37
TSPAN17-208ENST00000514705 LRRIQ1Q96JM4 1722 aa17.34■□□□□ 0.37
TSPAN17-208ENST00000514705 RIPK4P57078 832 aa17.34■□□□□ 0.37
TSPAN17-208ENST00000514705 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
TSPAN17-208ENST00000514705 RLBP1P12271 317 aa17.34■□□□□ 0.37
TSPAN17-208ENST00000514705 BLMP54132 1417 aaPredicted RBP17.33■□□□□ 0.37
TSPAN17-208ENST00000514705 COL17A1Q9UMD9 1497 aaPredicted RBP17.33■□□□□ 0.36
TSPAN17-208ENST00000514705 TBC1D32Q96NH3 1257 aa17.33■□□□□ 0.36
TSPAN17-208ENST00000514705 FOXD4L5Q5VV16 416 aaPredicted RBP17.33■□□□□ 0.36
TSPAN17-208ENST00000514705 FOXD4L4Q8WXT5 416 aaPredicted RBP17.33■□□□□ 0.36
TSPAN17-208ENST00000514705 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
TSPAN17-208ENST00000514705 AAMPQ13685 434 aa17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 DNTTIP2Q5QJE6 756 aaKnown RBP17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 CHMP4BQ9H444 224 aaKnown RBP17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 CABP2Q9NPB3 220 aa17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 CASC1Q6TDU7 716 aa17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 STAC3Q96MF2 364 aa17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 NOB1Q9ULX3 412 aaKnown RBP17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 ADGRL2O95490 1459 aa17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 ZMYM4Q5VZL5 1548 aa17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 XRCC6P12956 609 aaKnown RBP eCLIP17.31■□□□□ 0.36
TSPAN17-208ENST00000514705 CALD1Q05682 793 aaKnown RBP17.3■□□□□ 0.36
TSPAN17-208ENST00000514705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.3■□□□□ 0.36
TSPAN17-208ENST00000514705 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
TSPAN17-208ENST00000514705 WDR63Q8IWG1 891 aa17.3■□□□□ 0.36
TSPAN17-208ENST00000514705 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
TSPAN17-208ENST00000514705 A2MP01023 1474 aa17.29■□□□□ 0.36
TSPAN17-208ENST00000514705 RRAGDQ9NQL2 400 aaPredicted RBP17.29■□□□□ 0.36
TSPAN17-208ENST00000514705 ZNF518AQ6AHZ1 1483 aa17.28■□□□□ 0.36
TSPAN17-208ENST00000514705 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
TSPAN17-208ENST00000514705 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
TSPAN17-208ENST00000514705 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
TSPAN17-208ENST00000514705 CARD14Q9BXL6 1004 aa17.27■□□□□ 0.36
TSPAN17-208ENST00000514705 PLCB2Q00722 1185 aa17.27■□□□□ 0.35
TSPAN17-208ENST00000514705 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
TSPAN17-208ENST00000514705 EVC2Q86UK5 1308 aa17.27■□□□□ 0.35
TSPAN17-208ENST00000514705 SLC52A1Q9NWF4 448 aa17.27■□□□□ 0.35
TSPAN17-208ENST00000514705 ATF7IPQ6VMQ6 1270 aa17.26■□□□□ 0.35
TSPAN17-208ENST00000514705 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
TSPAN17-208ENST00000514705 MINK1Q8N4C8 1332 aaPredicted RBP17.26■□□□□ 0.35
TSPAN17-208ENST00000514705 NOL8Q76FK4 1167 aaKnown RBP17.26■□□□□ 0.35
TSPAN17-208ENST00000514705 SKOR2Q2VWA4 1001 aaPredicted RBP17.25■□□□□ 0.35
TSPAN17-208ENST00000514705 HDGFL2Q7Z4V5 671 aaPredicted RBP17.25■□□□□ 0.35
TSPAN17-208ENST00000514705 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
TSPAN17-208ENST00000514705 CLASP1Q7Z460 1538 aa17.25■□□□□ 0.35
TSPAN17-208ENST00000514705 TMEM57Q8N5G2 664 aa17.25■□□□□ 0.35
TSPAN17-208ENST00000514705 ESPNB1AK53 854 aa17.25■□□□□ 0.35
TSPAN17-208ENST00000514705 SOX12O15370 315 aa17.24■□□□□ 0.35
TSPAN17-208ENST00000514705 TERF2IPQ9NYB0 399 aa17.24■□□□□ 0.35
TSPAN17-208ENST00000514705 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
TSPAN17-208ENST00000514705 UBE2Q2Q8WVN8 375 aa17.24■□□□□ 0.35
TSPAN17-208ENST00000514705 PTMSP20962 102 aa17.24■□□□□ 0.35
TSPAN17-208ENST00000514705 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.24■□□□□ 0.35
TSPAN17-208ENST00000514705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■■■■■ 51.7
TSPAN17-208ENST00000514705 SCAF11Q99590 1463 aaKnown RBP17.23■□□□□ 0.35
TSPAN17-208ENST00000514705 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
TSPAN17-208ENST00000514705 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
TSPAN17-208ENST00000514705 ASXL1Q8IXJ9 1541 aa17.23■□□□□ 0.35
TSPAN17-208ENST00000514705 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
TSPAN17-208ENST00000514705 HMOX1P09601 288 aa17.23■□□□□ 0.35
TSPAN17-208ENST00000514705 TRIM27P14373 513 aa17.22■□□□□ 0.35
TSPAN17-208ENST00000514705 MCTP1Q6DN14 999 aa17.22■□□□□ 0.35
TSPAN17-208ENST00000514705 GPRASP1Q5JY77 1395 aa17.22■□□□□ 0.35
TSPAN17-208ENST00000514705 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
TSPAN17-208ENST00000514705 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
TSPAN17-208ENST00000514705 NASPP49321 788 aaPredicted RBP17.21■□□□□ 0.35
TSPAN17-208ENST00000514705 MAGI2Q86UL8 1455 aa17.21■□□□□ 0.35
TSPAN17-208ENST00000514705 DUOX2Q9NRD8 1548 aa17.21■□□□□ 0.35
TSPAN17-208ENST00000514705 SHANK2Q9UPX8 1470 aa17.21■□□□□ 0.34
TSPAN17-208ENST00000514705 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
TSPAN17-208ENST00000514705 CHD1LQ86WJ1 897 aa17.19■□□□□ 0.34
TSPAN17-208ENST00000514705 ZCCHC11Q5TAX3 1644 aaKnown RBP17.19■□□□□ 0.34
TSPAN17-208ENST00000514705 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
TSPAN17-208ENST00000514705 PIK3C2GO75747 1445 aa17.18■□□□□ 0.34
TSPAN17-208ENST00000514705 RTEL1-TNFRSF6BF6WH68 1400 aa17.18■□□□□ 0.34
TSPAN17-208ENST00000514705 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
TSPAN17-208ENST00000514705 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
TSPAN17-208ENST00000514705 FAM13BQ9NYF5 915 aa17.17■□□□□ 0.34
TSPAN17-208ENST00000514705 INSRP06213 1382 aa17.17■□□□□ 0.34
TSPAN17-208ENST00000514705 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
TSPAN17-208ENST00000514705 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
TSPAN17-208ENST00000514705 TRMT2AQ8IZ69 625 aaKnown RBP17.16■□□□□ 0.34
TSPAN17-208ENST00000514705 USP19O94966 1318 aa17.16■□□□□ 0.34
TSPAN17-208ENST00000514705 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
TSPAN17-208ENST00000514705 ST18O60284 1047 aa17.15■□□□□ 0.34
TSPAN17-208ENST00000514705 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
TSPAN17-208ENST00000514705 PRKAR2BP31323 418 aa17.15■□□□□ 0.34
TSPAN17-208ENST00000514705 TXNDC2Q86VQ3 553 aa17.15■□□□□ 0.34
TSPAN17-208ENST00000514705 ADGBQ8N7X0 1667 aa17.15■□□□□ 0.34
TSPAN17-208ENST00000514705 K7ELQ4 463 aaPredicted RBP17.14■□□□□ 0.33
TSPAN17-208ENST00000514705 RBM10P98175 930 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms