RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 STRCP1A6NGW2 1772 aa8.05□□□□□ -1.12
HTT-211ENST00000513326 CPS1P31327 1500 aa8.05□□□□□ -1.12
HTT-211ENST00000513326 PTGER2P43116 358 aa8.05□□□□□ -1.12
HTT-211ENST00000513326 POLR1AO95602 1720 aaPredicted RBP8.05□□□□□ -1.12
HTT-211ENST00000513326 A2ML1A8K2U0 1454 aa8.05□□□□□ -1.12
HTT-211ENST00000513326 SETD1AO15047 1707 aaKnown RBP8.04□□□□□ -1.12
HTT-211ENST00000513326 ZNF316A6NFI3 1004 aaPredicted RBP8.04□□□□□ -1.12
HTT-211ENST00000513326 GRXCR2A6NFK2 248 aa8.04□□□□□ -1.12
HTT-211ENST00000513326 EVI5O60447 810 aa8.04□□□□□ -1.12
HTT-211ENST00000513326 INO80Q9ULG1 1556 aaPredicted RBP8.04□□□□□ -1.12
HTT-211ENST00000513326 CLIP1P30622 1438 aa8.03□□□□□ -1.12
HTT-211ENST00000513326 ATP7AQ04656 1500 aa8.03□□□□□ -1.12
HTT-211ENST00000513326 TOM1O60784 492 aa8.03□□□□□ -1.12
HTT-211ENST00000513326 FBXO31Q5XUX0 539 aaPredicted RBP8.03□□□□□ -1.12
HTT-211ENST00000513326 FMN1Q68DA7 1419 aa8.03□□□□□ -1.12
HTT-211ENST00000513326 A2MP01023 1474 aa8.02□□□□□ -1.13
HTT-211ENST00000513326 HNRNPMP52272 730 aaKnown RBP eCLIP8.02□□□□□ -1.13
HTT-211ENST00000513326 GGT6Q6P531 493 aa8.02□□□□□ -1.13
HTT-211ENST00000513326 POTEAQ6S8J7 498 aa8.02□□□□□ -1.13
HTT-211ENST00000513326 BARGINQ6ZT62 677 aa8.02□□□□□ -1.13
HTT-211ENST00000513326 ZNF777Q9ULD5 760 aaPredicted RBP8.02□□□□□ -1.13
HTT-211ENST00000513326 SPAG9O60271 1321 aaKnown RBP8.02□□□□□ -1.13
HTT-211ENST00000513326 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.01□□□□□ -1.13
HTT-211ENST00000513326 SLC24A3Q9HC58 644 aa8.01□□□□□ -1.13
HTT-211ENST00000513326 CDK11AQ9UQ88 783 aaPredicted RBP8.01□□□□□ -1.13
HTT-211ENST00000513326 LRRC7Q96NW7 1537 aa8.01□□□□□ -1.13
HTT-211ENST00000513326 OSBPP22059 807 aa8□□□□□ -1.13
HTT-211ENST00000513326 DDX12PQ92771 950 aa8□□□□□ -1.13
HTT-211ENST00000513326 ANO8Q9HCE9 1232 aaPredicted RBP8□□□□□ -1.13
HTT-211ENST00000513326 TNRQ92752 1358 aa7.99□□□□□ -1.13
HTT-211ENST00000513326 GPATCH8Q9UKJ3 1502 aaKnown RBP7.99□□□□□ -1.13
HTT-211ENST00000513326 NPHP4O75161 1426 aaPredicted RBP7.99□□□□□ -1.13
HTT-211ENST00000513326 RNF17Q9BXT8 1623 aaKnown RBP7.99□□□□□ -1.13
HTT-211ENST00000513326 EEA1Q15075 1411 aa7.98□□□□□ -1.13
HTT-211ENST00000513326 POTEJP0CG39 1038 aa7.98□□□□□ -1.13
HTT-211ENST00000513326 PCDHGA4Q9Y5G9 962 aa7.98□□□□□ -1.13
HTT-211ENST00000513326 NUTM2FA1L443 756 aa7.97□□□□□ -1.13
HTT-211ENST00000513326 MAMSTRQ6ZN01 415 aa7.97□□□□□ -1.13
HTT-211ENST00000513326 KRI1Q8N9T8 703 aaKnown RBP7.97□□□□□ -1.13
HTT-211ENST00000513326 MED14O60244 1454 aa7.97□□□□□ -1.13
HTT-211ENST00000513326 IQGAP1P46940 1657 aa7.97□□□□□ -1.13
HTT-211ENST00000513326 ZNF644Q9H582 1327 aaPredicted RBP7.97□□□□□ -1.13
HTT-211ENST00000513326 XIRP1Q702N8 1843 aaKnown RBP7.96□□□□□ -1.13
HTT-211ENST00000513326 PZPP20742 1482 aa7.96□□□□□ -1.13
HTT-211ENST00000513326 UBTFP17480 764 aaKnown RBP7.96□□□□□ -1.14
HTT-211ENST00000513326 AK7Q96M32 723 aa7.96□□□□□ -1.14
HTT-211ENST00000513326 SCUBE2Q9NQ36 999 aa7.96□□□□□ -1.14
HTT-211ENST00000513326 DEPDC5O75140 1603 aa7.96□□□□□ -1.14
HTT-211ENST00000513326 ADGBQ8N7X0 1667 aa7.95□□□□□ -1.14
HTT-211ENST00000513326 CASKIN1Q8WXD9 1431 aa7.95□□□□□ -1.14
HTT-211ENST00000513326 POTEB2H3BUK9 544 aa7.95□□□□□ -1.14
HTT-211ENST00000513326 GPR37O15354 613 aa7.95□□□□□ -1.14
HTT-211ENST00000513326 BRPF1P55201 1214 aaPredicted RBP7.95□□□□□ -1.14
HTT-211ENST00000513326 ANKLE2Q86XL3 938 aa7.95□□□□□ -1.14
HTT-211ENST00000513326 SYNMO15061 1565 aa7.95□□□□□ -1.14
HTT-211ENST00000513326 ZC3H13Q5T200 1668 aaKnown RBP7.95□□□□□ -1.14
HTT-211ENST00000513326 CCDC18Q5T9S5 1454 aa7.94□□□□□ -1.14
HTT-211ENST00000513326 UGGT1Q9NYU2 1555 aa7.94□□□□□ -1.14
HTT-211ENST00000513326 PHF14O94880 888 aa7.94□□□□□ -1.14
HTT-211ENST00000513326 DOK7Q18PE1 504 aa7.94□□□□□ -1.14
HTT-211ENST00000513326 SLAIN1Q8ND83 568 aa7.94□□□□□ -1.14
HTT-211ENST00000513326 EPAS1Q99814 870 aa7.94□□□□□ -1.14
HTT-211ENST00000513326 KIAA1107Q9UPP5 1409 aa7.94□□□□□ -1.14
HTT-211ENST00000513326 KDM5DQ9BY66 1539 aa7.93□□□□□ -1.14
HTT-211ENST00000513326 FCHSD2O94868 740 aa7.93□□□□□ -1.14
HTT-211ENST00000513326 TMEM132AQ24JP5 1023 aa7.93□□□□□ -1.14
HTT-211ENST00000513326 MIA2Q96PC5 1412 aa7.93□□□□□ -1.14
HTT-211ENST00000513326 MBD5Q9P267 1494 aa7.93□□□□□ -1.14
HTT-211ENST00000513326 RIMBP2O15034 1052 aa7.92□□□□□ -1.14
HTT-211ENST00000513326 HIC1Q14526 733 aa7.92□□□□□ -1.14
HTT-211ENST00000513326 NEUROD2Q15784 382 aa7.92□□□□□ -1.14
HTT-211ENST00000513326 ZSWIM6Q9HCJ5 1215 aa7.92□□□□□ -1.14
HTT-211ENST00000513326 FAM135AQ9P2D6 1515 aa7.92□□□□□ -1.14
HTT-211ENST00000513326 KIF3BO15066 747 aa7.91□□□□□ -1.14
HTT-211ENST00000513326 GNPATO15228 680 aa7.91□□□□□ -1.14
HTT-211ENST00000513326 PRIM1P49642 420 aaKnown RBP7.91□□□□□ -1.14
HTT-211ENST00000513326 RBM33Q96EV2 1170 aaKnown RBP7.91□□□□□ -1.14
HTT-211ENST00000513326 CFDP1Q9UEE9 299 aaPredicted RBP7.91□□□□□ -1.14
HTT-211ENST00000513326 MINK1Q8N4C8 1332 aaPredicted RBP7.91□□□□□ -1.14
HTT-211ENST00000513326 NLRP1Q9C000 1473 aa7.91□□□□□ -1.14
HTT-211ENST00000513326 TIAM1Q13009 1591 aa7.9□□□□□ -1.14
HTT-211ENST00000513326 NCOA2Q15596 1464 aa7.9□□□□□ -1.14
HTT-211ENST00000513326 PLEKHH2Q8IVE3 1493 aa7.9□□□□□ -1.14
HTT-211ENST00000513326 DHX29Q7Z478 1369 aaKnown RBP7.9□□□□□ -1.14
HTT-211ENST00000513326 HOXB3P14651 431 aaPredicted RBP7.9□□□□□ -1.14
HTT-211ENST00000513326 EN1Q05925 392 aaPredicted RBP7.9□□□□□ -1.14
HTT-211ENST00000513326 PTGDRQ13258 359 aa7.9□□□□□ -1.14
HTT-211ENST00000513326 THEMISQ8N1K5 641 aaPredicted RBP7.9□□□□□ -1.14
HTT-211ENST00000513326 FBXW7Q969H0 707 aa7.9□□□□□ -1.14
HTT-211ENST00000513326 PCDHGA10Q9Y5H3 936 aa7.9□□□□□ -1.14
HTT-211ENST00000513326 ROBO1Q9Y6N7 1651 aa7.89□□□□□ -1.15
HTT-211ENST00000513326 FYCO1Q9BQS8 1478 aa7.89□□□□□ -1.15
HTT-211ENST00000513326 LTKP29376 864 aa7.89□□□□□ -1.15
HTT-211ENST00000513326 MAP2K5Q13163 448 aa7.89□□□□□ -1.15
HTT-211ENST00000513326 TYW1BQ6NUM6 668 aa7.89□□□□□ -1.15
HTT-211ENST00000513326 LRP6O75581 1613 aa7.89□□□□□ -1.15
HTT-211ENST00000513326 ABCC3O15438 1527 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 MAP3K1Q13233 1512 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 ERVK-7P63135 1459 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 FAM135BQ49AJ0 1406 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms