RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 ZMYM3Q14202 1370 aa7.17□□□□□ -1.26
CALCOCO2-213ENST00000509112 PLEKHH2Q8IVE3 1493 aa7.17□□□□□ -1.26
CALCOCO2-213ENST00000509112 FAM135AQ9P2D6 1515 aa7.17□□□□□ -1.26
CALCOCO2-213ENST00000509112 CEP170BQ9Y4F5 1589 aaPredicted RBP7.16□□□□□ -1.26
CALCOCO2-213ENST00000509112 ADGBQ8N7X0 1667 aa7.16□□□□□ -1.26
CALCOCO2-213ENST00000509112 PHF14O94880 888 aa7.16□□□□□ -1.26
CALCOCO2-213ENST00000509112 MLLT3P42568 568 aaPredicted RBP7.16□□□□□ -1.26
CALCOCO2-213ENST00000509112 LHX8Q68G74 356 aa7.16□□□□□ -1.26
CALCOCO2-213ENST00000509112 CLTCQ00610 1675 aaKnown RBP7.16□□□□□ -1.26
CALCOCO2-213ENST00000509112 PSDA5PKW4 1024 aaPredicted RBP7.15□□□□□ -1.26
CALCOCO2-213ENST00000509112 PTPRKQ15262 1439 aa7.15□□□□□ -1.27
CALCOCO2-213ENST00000509112 FYCO1Q9BQS8 1478 aa7.15□□□□□ -1.27
CALCOCO2-213ENST00000509112 ATP7AQ04656 1500 aa7.15□□□□□ -1.27
CALCOCO2-213ENST00000509112 POLR1AO95602 1720 aaPredicted RBP7.14□□□□□ -1.27
CALCOCO2-213ENST00000509112 A2MP01023 1474 aa7.14□□□□□ -1.27
CALCOCO2-213ENST00000509112 UBTFP17480 764 aaKnown RBP7.14□□□□□ -1.27
CALCOCO2-213ENST00000509112 CPS1P31327 1500 aa7.14□□□□□ -1.27
CALCOCO2-213ENST00000509112 GPR153Q6NV75 609 aa7.14□□□□□ -1.27
CALCOCO2-213ENST00000509112 FBXW7Q969H0 707 aa7.14□□□□□ -1.27
CALCOCO2-213ENST00000509112 OTUD5Q96G74 571 aa7.14□□□□□ -1.27
CALCOCO2-213ENST00000509112 GPATCH8Q9UKJ3 1502 aaKnown RBP7.14□□□□□ -1.27
CALCOCO2-213ENST00000509112 MYT1LQ9UL68 1186 aa7.14□□□□□ -1.27
CALCOCO2-213ENST00000509112 SYCP2Q9BX26 1530 aa7.13□□□□□ -1.27
CALCOCO2-213ENST00000509112 A2ML1A8K2U0 1454 aa7.13□□□□□ -1.27
CALCOCO2-213ENST00000509112 OSBPP22059 807 aa7.13□□□□□ -1.27
CALCOCO2-213ENST00000509112 ZNF710Q8N1W2 664 aa7.13□□□□□ -1.27
CALCOCO2-213ENST00000509112 ZC3H15Q8WU90 426 aaKnown RBP7.13□□□□□ -1.27
CALCOCO2-213ENST00000509112 ATP1B4Q9UN42 357 aaPredicted RBP7.13□□□□□ -1.27
CALCOCO2-213ENST00000509112 DNMT1P26358 1616 aaKnown RBP7.12□□□□□ -1.27
CALCOCO2-213ENST00000509112 RTEL1-TNFRSF6BF6WH68 1400 aa7.12□□□□□ -1.27
CALCOCO2-213ENST00000509112 SPAG9O60271 1321 aaKnown RBP7.12□□□□□ -1.27
CALCOCO2-213ENST00000509112 ZMYND10O75800 440 aa7.12□□□□□ -1.27
CALCOCO2-213ENST00000509112 GPIHBP1Q8IV16 184 aa7.12□□□□□ -1.27
CALCOCO2-213ENST00000509112 ZNF335Q9H4Z2 1342 aaPredicted RBP7.11□□□□□ -1.27
CALCOCO2-213ENST00000509112 GRXCR2A6NFK2 248 aa7.11□□□□□ -1.27
CALCOCO2-213ENST00000509112 UBAP1LF5GYI3 381 aa7.11□□□□□ -1.27
CALCOCO2-213ENST00000509112 HOXB1P14653 301 aaPredicted RBP7.11□□□□□ -1.27
CALCOCO2-213ENST00000509112 DEPDC5O75140 1603 aa7.11□□□□□ -1.27
CALCOCO2-213ENST00000509112 PRKCSHP14314 528 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-213ENST00000509112 FOSBP53539 338 aa7.1□□□□□ -1.27
CALCOCO2-213ENST00000509112 EN1Q05925 392 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-213ENST00000509112 RBM26Q5T8P6 1007 aaKnown RBP7.1□□□□□ -1.27
CALCOCO2-213ENST00000509112 TYW1BQ6NUM6 668 aa7.1□□□□□ -1.27
CALCOCO2-213ENST00000509112 BARGINQ6ZT62 677 aa7.1□□□□□ -1.27
CALCOCO2-213ENST00000509112 MED1Q15648 1581 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-213ENST00000509112 NEURL4Q96JN8 1562 aa7.1□□□□□ -1.27
CALCOCO2-213ENST00000509112 MED14O60244 1454 aa7.1□□□□□ -1.27
CALCOCO2-213ENST00000509112 DDX12PQ92771 950 aa7.09□□□□□ -1.27
CALCOCO2-213ENST00000509112 PCDHGA10Q9Y5H3 936 aa7.09□□□□□ -1.27
CALCOCO2-213ENST00000509112 PZPP20742 1482 aa7.09□□□□□ -1.27
CALCOCO2-213ENST00000509112 MBD5Q9P267 1494 aa7.09□□□□□ -1.27
CALCOCO2-213ENST00000509112 SHANK2Q9UPX8 1470 aa7.09□□□□□ -1.27
CALCOCO2-213ENST00000509112 DHX29Q7Z478 1369 aaKnown RBP7.08□□□□□ -1.28
CALCOCO2-213ENST00000509112 GPR37O15354 613 aa7.08□□□□□ -1.28
CALCOCO2-213ENST00000509112 TOM1O60784 492 aa7.08□□□□□ -1.28
CALCOCO2-213ENST00000509112 HIC1Q14526 733 aa7.08□□□□□ -1.28
CALCOCO2-213ENST00000509112 ARSIQ5FYB1 569 aa7.08□□□□□ -1.28
CALCOCO2-213ENST00000509112 NLRP1Q9C000 1473 aa7.08□□□□□ -1.28
CALCOCO2-213ENST00000509112 VWDEQ8N2E2 1590 aa7.08□□□□□ -1.28
CALCOCO2-213ENST00000509112 KDM5DQ9BY66 1539 aa7.07□□□□□ -1.28
CALCOCO2-213ENST00000509112 FCHSD2O94868 740 aa7.07□□□□□ -1.28
CALCOCO2-213ENST00000509112 HNRNPMP52272 730 aaKnown RBP eCLIP7.07□□□□□ -1.28
CALCOCO2-213ENST00000509112 RSPH4AQ5TD94 716 aa7.07□□□□□ -1.28
CALCOCO2-213ENST00000509112 CFDP1Q9UEE9 299 aaPredicted RBP7.07□□□□□ -1.28
CALCOCO2-213ENST00000509112 SYNMO15061 1565 aa7.07□□□□□ -1.28
CALCOCO2-213ENST00000509112 TIAM1Q13009 1591 aa7.07□□□□□ -1.28
CALCOCO2-213ENST00000509112 CCNB3Q8WWL7 1395 aa7.07□□□□□ -1.28
CALCOCO2-213ENST00000509112 EHBP1L1Q8N3D4 1523 aa7.06□□□□□ -1.28
CALCOCO2-213ENST00000509112 ZC3H13Q5T200 1668 aaKnown RBP7.06□□□□□ -1.28
CALCOCO2-213ENST00000509112 ALKQ9UM73 1620 aa7.06□□□□□ -1.28
CALCOCO2-213ENST00000509112 NUDT7P0C024 238 aa7.06□□□□□ -1.28
CALCOCO2-213ENST00000509112 ZDHHC16Q969W1 377 aa7.06□□□□□ -1.28
CALCOCO2-213ENST00000509112 RBM27Q9P2N5 1060 aaKnown RBP7.06□□□□□ -1.28
CALCOCO2-213ENST00000509112 TNRQ92752 1358 aa7.06□□□□□ -1.28
CALCOCO2-213ENST00000509112 CEP162Q5TB80 1403 aa7.05□□□□□ -1.28
CALCOCO2-213ENST00000509112 PTGDRQ13258 359 aa7.05□□□□□ -1.28
CALCOCO2-213ENST00000509112 PPP4R3BQ5MIZ7 849 aa7.05□□□□□ -1.28
CALCOCO2-213ENST00000509112 GGT6Q6P531 493 aa7.05□□□□□ -1.28
CALCOCO2-213ENST00000509112 THEMISQ8N1K5 641 aaPredicted RBP7.05□□□□□ -1.28
CALCOCO2-213ENST00000509112 ZNF777Q9ULD5 760 aaPredicted RBP7.05□□□□□ -1.28
CALCOCO2-213ENST00000509112 IQGAP1P46940 1657 aa7.05□□□□□ -1.28
CALCOCO2-213ENST00000509112 CCDC141Q6ZP82 1450 aa7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 MINK1Q8N4C8 1332 aaPredicted RBP7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 ARHGEF5Q12774 1597 aa7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 UGGT1Q9NYU2 1555 aa7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 MIA2Q96PC5 1412 aa7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 NUTM2FA1L443 756 aa7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 GNPATO15228 680 aa7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 HSPA1LP34931 641 aa7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 ANKLE2Q86XL3 938 aa7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 MTUS2Q5JR59 1369 aa7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 RNF17Q9BXT8 1623 aaKnown RBP7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 EIF2AK4Q9P2K8 1649 aaKnown RBP7.04□□□□□ -1.28
CALCOCO2-213ENST00000509112 NPHP4O75161 1426 aaPredicted RBP7.03□□□□□ -1.28
CALCOCO2-213ENST00000509112 ZNF454Q8N9F8 522 aa7.03□□□□□ -1.28
CALCOCO2-213ENST00000509112 BCL2L12Q9HB09 334 aa7.03□□□□□ -1.28
CALCOCO2-213ENST00000509112 LHX6Q9UPM6 363 aa7.03□□□□□ -1.28
CALCOCO2-213ENST00000509112 MAST1Q9Y2H9 1570 aa7.03□□□□□ -1.28
CALCOCO2-213ENST00000509112 STRCP1A6NGW2 1772 aa7.03□□□□□ -1.28
CALCOCO2-213ENST00000509112 MAP3K7O43318 606 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms