RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 IPO8O15397 1037 aaKnown RBP9.96□□□□□ -0.81
PROM1-206ENST00000505450 NGDNQ8NEJ9 315 aaKnown RBP9.96□□□□□ -0.81
PROM1-206ENST00000505450 PPP6R1Q9UPN7 881 aa9.96□□□□□ -0.81
PROM1-206ENST00000505450 EIF4G3O43432 1585 aaKnown RBP9.96□□□□□ -0.82
PROM1-206ENST00000505450 IQGAP2Q13576 1575 aa9.96□□□□□ -0.82
PROM1-206ENST00000505450 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
PROM1-206ENST00000505450 TBC1D32Q96NH3 1257 aa9.96□□□□□ -0.82
PROM1-206ENST00000505450 RARSP54136 660 aaKnown RBP9.96□□□□□ -0.82
PROM1-206ENST00000505450 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.82
PROM1-206ENST00000505450 SLC12A5Q9H2X9 1139 aa9.96□□□□□ -0.82
PROM1-206ENST00000505450 TOM1O60784 492 aa9.95□□□□□ -0.82
PROM1-206ENST00000505450 RBM10P98175 930 aaKnown RBP9.95□□□□□ -0.82
PROM1-206ENST00000505450 EXOSC9Q06265 439 aaKnown RBP9.95□□□□□ -0.82
PROM1-206ENST00000505450 NKTRP30414 1462 aaKnown RBP9.95□□□□□ -0.82
PROM1-206ENST00000505450 RLBP1P12271 317 aa9.94□□□□□ -0.82
PROM1-206ENST00000505450 BCORL1Q5H9F3 1711 aa9.94□□□□□ -0.82
PROM1-206ENST00000505450 FOXD4L6Q3SYB3 417 aaPredicted RBP9.94□□□□□ -0.82
PROM1-206ENST00000505450 FOXD4L3Q6VB84 417 aaPredicted RBP9.94□□□□□ -0.82
PROM1-206ENST00000505450 DDX19BQ9UMR2 479 aa9.94□□□□□ -0.82
PROM1-206ENST00000505450 NGEFQ8N5V2 710 aa9.93□□□□□ -0.82
PROM1-206ENST00000505450 GPATCH8Q9UKJ3 1502 aaKnown RBP9.93□□□□□ -0.82
PROM1-206ENST00000505450 NOL8Q76FK4 1167 aaKnown RBP9.93□□□□□ -0.82
PROM1-206ENST00000505450 ZMYND15Q9H091 742 aa9.93□□□□□ -0.82
PROM1-206ENST00000505450 FBXO31Q5XUX0 539 aaPredicted RBP9.93□□□□□ -0.82
PROM1-206ENST00000505450 NASPP49321 788 aaPredicted RBP9.93□□□□□ -0.82
PROM1-206ENST00000505450 TMEM132EQ6IEE7 984 aa9.93□□□□□ -0.82
PROM1-206ENST00000505450 GCC2Q8IWJ2 1684 aa9.93□□□□□ -0.82
PROM1-206ENST00000505450 MVPQ14764 893 aaKnown RBP9.92□□□□□ -0.82
PROM1-206ENST00000505450 SKOR2Q2VWA4 1001 aaPredicted RBP9.92□□□□□ -0.82
PROM1-206ENST00000505450 PLEKHH2Q8IVE3 1493 aa9.92□□□□□ -0.82
PROM1-206ENST00000505450 R3HCC1Q9Y3T6 440 aaKnown RBP9.92□□□□□ -0.82
PROM1-206ENST00000505450 C1orf115Q9H7X2 142 aa9.92□□□□□ -0.82
PROM1-206ENST00000505450 NPHP1O15259 732 aa9.92□□□□□ -0.82
PROM1-206ENST00000505450 SF3B2Q13435 895 aaKnown RBP9.92□□□□□ -0.82
PROM1-206ENST00000505450 MCTP1Q6DN14 999 aa9.92□□□□□ -0.82
PROM1-206ENST00000505450 KIAA1211Q6ZU35 1233 aa9.91□□□□□ -0.82
PROM1-206ENST00000505450 ADAMTS2O95450 1211 aa9.91□□□□□ -0.82
PROM1-206ENST00000505450 EVA1CP58658 441 aa9.91□□□□□ -0.82
PROM1-206ENST00000505450 PRAG1Q86YV5 1406 aa9.91□□□□□ -0.82
PROM1-206ENST00000505450 CLCN1P35523 988 aa9.91□□□□□ -0.82
PROM1-206ENST00000505450 NUP153P49790 1475 aaKnown RBP9.91□□□□□ -0.82
PROM1-206ENST00000505450 RRP9O43818 475 aaKnown RBP9.9□□□□□ -0.82
PROM1-206ENST00000505450 RIPK4P57078 832 aa9.9□□□□□ -0.82
PROM1-206ENST00000505450 CASC1Q6TDU7 716 aa9.9□□□□□ -0.82
PROM1-206ENST00000505450 NOB1Q9ULX3 412 aaKnown RBP9.9□□□□□ -0.82
PROM1-206ENST00000505450 CAVIN1Q6NZI2 390 aaKnown RBP9.9□□□□□ -0.82
PROM1-206ENST00000505450 UHRF1BP1Q6BDS2 1440 aa9.9□□□□□ -0.82
PROM1-206ENST00000505450 TNPO1Q92973 898 aaKnown RBP9.9□□□□□ -0.83
PROM1-206ENST00000505450 GGNBP2Q9H3C7 697 aa9.89□□□□□ -0.83
PROM1-206ENST00000505450 PTMSP20962 102 aa9.89□□□□□ -0.83
PROM1-206ENST00000505450 MPNDQ8N594 471 aa9.89□□□□□ -0.83
PROM1-206ENST00000505450 RNF214Q8ND24 703 aa9.89□□□□□ -0.83
PROM1-206ENST00000505450 KDM5CP41229 1560 aa9.88□□□□□ -0.83
PROM1-206ENST00000505450 AAMPQ13685 434 aa9.88□□□□□ -0.83
PROM1-206ENST00000505450 DCAF8L1A6NGE4 600 aa9.88□□□□□ -0.83
PROM1-206ENST00000505450 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
PROM1-206ENST00000505450 SAMD9Q5K651 1589 aa9.88□□□□□ -0.83
PROM1-206ENST00000505450 DNMT1P26358 1616 aaKnown RBP9.88□□□□□ -0.83
PROM1-206ENST00000505450 TMEM57Q8N5G2 664 aa9.88□□□□□ -0.83
PROM1-206ENST00000505450 SSH1Q8WYL5 1049 aa9.88□□□□□ -0.83
PROM1-206ENST00000505450 CHMP4BQ9H444 224 aaKnown RBP9.88□□□□□ -0.83
PROM1-206ENST00000505450 BLMP54132 1417 aaPredicted RBP9.88□□□□□ -0.83
PROM1-206ENST00000505450 PSME1Q06323 249 aa9.87□□□□□ -0.83
PROM1-206ENST00000505450 ATF7IPQ6VMQ6 1270 aa9.87□□□□□ -0.83
PROM1-206ENST00000505450 USP19O94966 1318 aa9.87□□□□□ -0.83
PROM1-206ENST00000505450 WDR63Q8IWG1 891 aa9.87□□□□□ -0.83
PROM1-206ENST00000505450 KIF14Q15058 1648 aa9.87□□□□□ -0.83
PROM1-206ENST00000505450 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
PROM1-206ENST00000505450 SSFA2P28290 1259 aa9.87□□□□□ -0.83
PROM1-206ENST00000505450 XPCQ01831 940 aaPredicted RBP9.87□□□□□ -0.83
PROM1-206ENST00000505450 ADGRL1O94910 1474 aa9.87□□□□□ -0.83
PROM1-206ENST00000505450 ESCO1Q5FWF5 840 aa9.86□□□□□ -0.83
PROM1-206ENST00000505450 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.86□□□□□ -0.83
PROM1-206ENST00000505450 LMTK3Q96Q04 1460 aa9.86□□□□□ -0.83
PROM1-206ENST00000505450 TRIM27P14373 513 aa9.86□□□□□ -0.83
PROM1-206ENST00000505450 NGLY1Q96IV0 654 aa9.86□□□□□ -0.83
PROM1-206ENST00000505450 RBM42Q9BTD8 480 aaKnown RBP9.86□□□□□ -0.83
PROM1-206ENST00000505450 CABP2Q9NPB3 220 aa9.86□□□□□ -0.83
PROM1-206ENST00000505450 PRPF40AO75400 957 aaKnown RBP9.85□□□□□ -0.83
PROM1-206ENST00000505450 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.85□□□□□ -0.83
PROM1-206ENST00000505450 LTV1Q96GA3 475 aaPredicted RBP9.85□□□□□ -0.83
PROM1-206ENST00000505450 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
PROM1-206ENST00000505450 NINLQ9Y2I6 1382 aa9.85□□□□□ -0.83
PROM1-206ENST00000505450 TPM2P07951 284 aa9.85□□□□□ -0.83
PROM1-206ENST00000505450 CHD1LQ86WJ1 897 aa9.85□□□□□ -0.83
PROM1-206ENST00000505450 COL17A1Q9UMD9 1497 aaPredicted RBP9.84□□□□□ -0.83
PROM1-206ENST00000505450 K7ELQ4 463 aaPredicted RBP9.84□□□□□ -0.83
PROM1-206ENST00000505450 PPP1R1BQ9UD71 204 aaPredicted RBP9.84□□□□□ -0.83
PROM1-206ENST00000505450 HMOX1P09601 288 aa9.84□□□□□ -0.83
PROM1-206ENST00000505450 CCDC173Q0VFZ6 552 aa9.84□□□□□ -0.83
PROM1-206ENST00000505450 NUTM2GQ5VZR2 741 aa9.84□□□□□ -0.83
PROM1-206ENST00000505450 ANTXR1Q9H6X2 564 aa9.84□□□□□ -0.83
PROM1-206ENST00000505450 ST18O60284 1047 aa9.84□□□□□ -0.83
PROM1-206ENST00000505450 ZNF521Q96K83 1311 aa9.83□□□□□ -0.84
PROM1-206ENST00000505450 VGFO15240 615 aaPredicted RBP9.83□□□□□ -0.84
PROM1-206ENST00000505450 FANCAO15360 1455 aa9.83□□□□□ -0.84
PROM1-206ENST00000505450 MBD5Q9P267 1494 aa9.83□□□□□ -0.84
PROM1-206ENST00000505450 KIF16BQ96L93 1317 aa9.83□□□□□ -0.84
PROM1-206ENST00000505450 ARHGEF12Q9NZN5 1544 aa9.83□□□□□ -0.84
PROM1-206ENST00000505450 ZSCAN30Q86W11 494 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms