RNA–Protein interactions for RNA: ENST00000497227.1

CARMIL1-204, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 3

Gene CARMIL1, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-204ENST00000497227 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
CARMIL1-204ENST00000497227 RYDENQ9NUL5 291 aaKnown RBP8.17□□□□□ -1.1
CARMIL1-204ENST00000497227 CCNB3Q8WWL7 1395 aa8.17□□□□□ -1.1
CARMIL1-204ENST00000497227 TNRQ92752 1358 aa8.17□□□□□ -1.1
CARMIL1-204ENST00000497227 MIA2Q96PC5 1412 aa8.17□□□□□ -1.1
CARMIL1-204ENST00000497227 MED1Q15648 1581 aaPredicted RBP8.17□□□□□ -1.1
CARMIL1-204ENST00000497227 INO80Q9ULG1 1556 aaPredicted RBP8.17□□□□□ -1.1
CARMIL1-204ENST00000497227 MYO3AQ8NEV4 1616 aa8.17□□□□□ -1.1
CARMIL1-204ENST00000497227 RTEL1-TNFRSF6BF6WH68 1400 aa8.16□□□□□ -1.1
CARMIL1-204ENST00000497227 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
CARMIL1-204ENST00000497227 VWDEQ8N2E2 1590 aa8.16□□□□□ -1.1
CARMIL1-204ENST00000497227 MED14O60244 1454 aa8.15□□□□□ -1.1
CARMIL1-204ENST00000497227 PLEKHH2Q8IVE3 1493 aa8.15□□□□□ -1.1
CARMIL1-204ENST00000497227 FYCO1Q9BQS8 1478 aa8.15□□□□□ -1.1
CARMIL1-204ENST00000497227 TULP1O00294 542 aaPredicted RBP8.15□□□□□ -1.1
CARMIL1-204ENST00000497227 MICALL2Q8IY33 904 aa8.15□□□□□ -1.1
CARMIL1-204ENST00000497227 WASHC2CQ9Y4E1 1318 aa8.14□□□□□ -1.11
CARMIL1-204ENST00000497227 LTKP29376 864 aa8.14□□□□□ -1.11
CARMIL1-204ENST00000497227 BCANQ96GW7 911 aa8.14□□□□□ -1.11
CARMIL1-204ENST00000497227 CPS1P31327 1500 aa8.13□□□□□ -1.11
CARMIL1-204ENST00000497227 LRRC7Q96NW7 1537 aa8.13□□□□□ -1.11
CARMIL1-204ENST00000497227 PZPP20742 1482 aa8.13□□□□□ -1.11
CARMIL1-204ENST00000497227 PTGER2P43116 358 aa8.13□□□□□ -1.11
CARMIL1-204ENST00000497227 POTEAQ6S8J7 498 aa8.13□□□□□ -1.11
CARMIL1-204ENST00000497227 NPHP4O75161 1426 aaPredicted RBP8.12□□□□□ -1.11
CARMIL1-204ENST00000497227 STRCP1A6NGW2 1772 aa8.12□□□□□ -1.11
CARMIL1-204ENST00000497227 ZNF687Q8N1G0 1237 aa8.12□□□□□ -1.11
CARMIL1-204ENST00000497227 MTUS2Q5JR59 1369 aa8.1□□□□□ -1.11
CARMIL1-204ENST00000497227 RIMBP2O15034 1052 aa8.1□□□□□ -1.11
CARMIL1-204ENST00000497227 RSPH4AQ5TD94 716 aa8.1□□□□□ -1.11
CARMIL1-204ENST00000497227 ZSWIM6Q9HCJ5 1215 aa8.1□□□□□ -1.11
CARMIL1-204ENST00000497227 TIAM1Q13009 1591 aa8.1□□□□□ -1.11
CARMIL1-204ENST00000497227 ADGBQ8N7X0 1667 aa8.09□□□□□ -1.11
CARMIL1-204ENST00000497227 NLRP1Q9C000 1473 aa8.09□□□□□ -1.11
CARMIL1-204ENST00000497227 VARS2Q5ST30 1063 aaKnown RBP8.09□□□□□ -1.11
CARMIL1-204ENST00000497227 SRCAPQ6ZRS2 3230 aa8.09□□□□□ -1.11
CARMIL1-204ENST00000497227 CEP162Q5TB80 1403 aa8.09□□□□□ -1.11
CARMIL1-204ENST00000497227 UGGT1Q9NYU2 1555 aa8.09□□□□□ -1.11
CARMIL1-204ENST00000497227 NCOA2Q15596 1464 aa8.08□□□□□ -1.12
CARMIL1-204ENST00000497227 DEPDC5O75140 1603 aa8.08□□□□□ -1.12
CARMIL1-204ENST00000497227 POLR1AO95602 1720 aaPredicted RBP8.07□□□□□ -1.12
CARMIL1-204ENST00000497227 TXNDC2Q86VQ3 553 aa8.07□□□□□ -1.12
CARMIL1-204ENST00000497227 KDM5DQ9BY66 1539 aa8.07□□□□□ -1.12
CARMIL1-204ENST00000497227 FAM135BQ49AJ0 1406 aa8.06□□□□□ -1.12
CARMIL1-204ENST00000497227 TSPY4P0CV99 314 aa8.06□□□□□ -1.12
CARMIL1-204ENST00000497227 TSPY10P0CW01 314 aa8.06□□□□□ -1.12
CARMIL1-204ENST00000497227 NKX1-1Q15270 411 aaPredicted RBP8.06□□□□□ -1.12
CARMIL1-204ENST00000497227 RBM33Q96EV2 1170 aaKnown RBP8.06□□□□□ -1.12
CARMIL1-204ENST00000497227 FAM135AQ9P2D6 1515 aa8.06□□□□□ -1.12
CARMIL1-204ENST00000497227 CCDC141Q6ZP82 1450 aa8.06□□□□□ -1.12
CARMIL1-204ENST00000497227 KANK4Q5T7N3 995 aaPredicted RBP8.05□□□□□ -1.12
CARMIL1-204ENST00000497227 ARHGAP23Q9P227 1491 aa8.05□□□□□ -1.12
CARMIL1-204ENST00000497227 ABCC3O15438 1527 aa8.04□□□□□ -1.12
CARMIL1-204ENST00000497227 PPP1R37O75864 691 aa8.04□□□□□ -1.12
CARMIL1-204ENST00000497227 IDI1Q13907 227 aa8.04□□□□□ -1.12
CARMIL1-204ENST00000497227 TMC2Q8TDI7 906 aa8.04□□□□□ -1.12
CARMIL1-204ENST00000497227 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.04□□□□□ -1.12
CARMIL1-204ENST00000497227 ERVK-7P63135 1459 aa8.04□□□□□ -1.12
CARMIL1-204ENST00000497227 CAMSAP2Q08AD1 1489 aa8.04□□□□□ -1.12
CARMIL1-204ENST00000497227 ZC3H13Q5T200 1668 aaKnown RBP8.04□□□□□ -1.12
CARMIL1-204ENST00000497227 XIRP1Q702N8 1843 aaKnown RBP8.03□□□□□ -1.12
CARMIL1-204ENST00000497227 IQGAP1P46940 1657 aa8.03□□□□□ -1.12
CARMIL1-204ENST00000497227 KCNA6P17658 529 aa8.03□□□□□ -1.12
CARMIL1-204ENST00000497227 GPR153Q6NV75 609 aa8.03□□□□□ -1.12
CARMIL1-204ENST00000497227 PODXL2Q9NZ53 605 aa8.03□□□□□ -1.12
CARMIL1-204ENST00000497227 CFAP65Q6ZU64 1925 aaKnown RBP8.03□□□□□ -1.12
CARMIL1-204ENST00000497227 TMEM94Q12767 1356 aa8.02□□□□□ -1.13
CARMIL1-204ENST00000497227 BBXQ8WY36 941 aaPredicted RBP8.02□□□□□ -1.13
CARMIL1-204ENST00000497227 SLC26A8Q96RN1 970 aa8.02□□□□□ -1.13
CARMIL1-204ENST00000497227 MROH1Q8NDA8 1641 aa8.02□□□□□ -1.13
CARMIL1-204ENST00000497227 SLIT1O75093 1534 aa8.02□□□□□ -1.13
CARMIL1-204ENST00000497227 ARHGEF5Q12774 1597 aa8.01□□□□□ -1.13
CARMIL1-204ENST00000497227 SCAF11Q99590 1463 aaKnown RBP8.01□□□□□ -1.13
CARMIL1-204ENST00000497227 PROSER2Q86WR7 435 aaPredicted RBP8.01□□□□□ -1.13
CARMIL1-204ENST00000497227 EHBP1L1Q8N3D4 1523 aa8.01□□□□□ -1.13
CARMIL1-204ENST00000497227 ARHGAP31Q2M1Z3 1444 aa8.01□□□□□ -1.13
CARMIL1-204ENST00000497227 RNF17Q9BXT8 1623 aaKnown RBP8□□□□□ -1.13
CARMIL1-204ENST00000497227 TMEM2Q9UHN6 1383 aa8□□□□□ -1.13
CARMIL1-204ENST00000497227 TET3O43151 1660 aa8□□□□□ -1.13
CARMIL1-204ENST00000497227 TMEM92Q6UXU6 159 aa8□□□□□ -1.13
CARMIL1-204ENST00000497227 SLAIN2Q9P270 581 aa8□□□□□ -1.13
CARMIL1-204ENST00000497227 UBR1Q8IWV7 1749 aa8□□□□□ -1.13
CARMIL1-204ENST00000497227 RRP7BPQ9NSQ0 103 aa7.99□□□□□ -1.13
CARMIL1-204ENST00000497227 EID1Q9Y6B2 187 aa7.99□□□□□ -1.13
CARMIL1-204ENST00000497227 C2orf72A6NCS6 295 aa7.98□□□□□ -1.13
CARMIL1-204ENST00000497227 GTPBP6O43824 516 aaPredicted RBP7.98□□□□□ -1.13
CARMIL1-204ENST00000497227 UPF1Q92900 1129 aaKnown RBP eCLIP7.98□□□□□ -1.13
CARMIL1-204ENST00000497227 BCL11AQ9H165 835 aa7.98□□□□□ -1.13
CARMIL1-204ENST00000497227 GTF3C3Q9Y5Q9 886 aa7.98□□□□□ -1.13
CARMIL1-204ENST00000497227 MAST1Q9Y2H9 1570 aa7.97□□□□□ -1.13
CARMIL1-204ENST00000497227 LOC105371045A0A1W2PR82 267 aa7.97□□□□□ -1.13
CARMIL1-204ENST00000497227 MAP3K1Q13233 1512 aa7.97□□□□□ -1.13
CARMIL1-204ENST00000497227 SYNMO15061 1565 aa7.97□□□□□ -1.13
CARMIL1-204ENST00000497227 ABCC5O15440 1437 aa7.96□□□□□ -1.13
CARMIL1-204ENST00000497227 LRRC9Q6ZRR7 1453 aa7.96□□□□□ -1.13
CARMIL1-204ENST00000497227 TPRNQ4KMQ1 711 aa7.95□□□□□ -1.14
CARMIL1-204ENST00000497227 ANKRD13DQ6ZTN6 518 aa7.95□□□□□ -1.14
CARMIL1-204ENST00000497227 SPRYD3Q8NCJ5 442 aa7.95□□□□□ -1.14
CARMIL1-204ENST00000497227 CEP152O94986 1710 aa7.95□□□□□ -1.14
CARMIL1-204ENST00000497227 PIK3C2BO00750 1634 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms