RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
CNOT4-210ENST00000491203 EFCAB6Q5THR3 1501 aa12.47□□□□□ -0.41
CNOT4-210ENST00000491203 FBXO22Q8NEZ5 403 aa12.47□□□□□ -0.41
CNOT4-210ENST00000491203 STK24Q9Y6E0 443 aa12.47□□□□□ -0.41
CNOT4-210ENST00000491203 ARHGAP31Q2M1Z3 1444 aa12.46□□□□□ -0.41
CNOT4-210ENST00000491203 PTPRMP28827 1452 aa12.46□□□□□ -0.42
CNOT4-210ENST00000491203 NPATQ14207 1427 aa12.45□□□□□ -0.42
CNOT4-210ENST00000491203 CEBPAP49715 358 aaPredicted RBP12.45□□□□□ -0.42
CNOT4-210ENST00000491203 MICALL2Q8IY33 904 aa12.45□□□□□ -0.42
CNOT4-210ENST00000491203 RPRD2Q5VT52 1461 aaKnown RBP12.45□□□□□ -0.42
CNOT4-210ENST00000491203 STK25O00506 426 aa12.44□□□□□ -0.42
CNOT4-210ENST00000491203 TMEM92Q6UXU6 159 aa12.44□□□□□ -0.42
CNOT4-210ENST00000491203 MFRPQ9BY79 579 aa12.44□□□□□ -0.42
CNOT4-210ENST00000491203 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
CNOT4-210ENST00000491203 E9PCH4 1651 aa12.43□□□□□ -0.42
CNOT4-210ENST00000491203 C3P01024 1663 aa12.43□□□□□ -0.42
CNOT4-210ENST00000491203 FBXO31Q5XUX0 539 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-210ENST00000491203 ERVK-7P63135 1459 aa12.42□□□□□ -0.42
CNOT4-210ENST00000491203 DHX57Q6P158 1386 aaKnown RBP12.42□□□□□ -0.42
CNOT4-210ENST00000491203 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
CNOT4-210ENST00000491203 TNRQ92752 1358 aa12.41□□□□□ -0.42
CNOT4-210ENST00000491203 NOS1P29475 1434 aa12.4□□□□□ -0.42
CNOT4-210ENST00000491203 SNPHO15079 494 aa12.4□□□□□ -0.42
CNOT4-210ENST00000491203 SPATA31D1Q6ZQQ2 1576 aa12.39□□□□□ -0.43
CNOT4-210ENST00000491203 PREX1Q8TCU6 1659 aa12.39□□□□□ -0.43
CNOT4-210ENST00000491203 PTPRTO14522 1441 aa12.39□□□□□ -0.43
CNOT4-210ENST00000491203 G3V3G9 751 aa12.39□□□□□ -0.43
CNOT4-210ENST00000491203 HOXB3P14651 431 aaPredicted RBP12.39□□□□□ -0.43
CNOT4-210ENST00000491203 CFAP65Q6ZU64 1925 aaKnown RBP12.39□□□□□ -0.43
CNOT4-210ENST00000491203 NLRP6P59044 892 aa12.37□□□□□ -0.43
CNOT4-210ENST00000491203 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
CNOT4-210ENST00000491203 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
CNOT4-210ENST00000491203 PCDH10Q9P2E7 1040 aa12.37□□□□□ -0.43
CNOT4-210ENST00000491203 PLA2R1Q13018 1463 aa12.37□□□□□ -0.43
CNOT4-210ENST00000491203 SPHKAPQ2M3C7 1700 aa12.37□□□□□ -0.43
CNOT4-210ENST00000491203 TRPM2O94759 1503 aa12.37□□□□□ -0.43
CNOT4-210ENST00000491203 SYNMO15061 1565 aa12.36□□□□□ -0.43
CNOT4-210ENST00000491203 ANKRD30BQ9BXX2 1392 aa12.36□□□□□ -0.43
CNOT4-210ENST00000491203 CCER1Q8TC90 406 aaPredicted RBP12.36□□□□□ -0.43
CNOT4-210ENST00000491203 SLC52A1Q9NWF4 448 aa12.36□□□□□ -0.43
CNOT4-210ENST00000491203 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
CNOT4-210ENST00000491203 NLRP1Q9C000 1473 aa12.34□□□□□ -0.43
CNOT4-210ENST00000491203 IDI1Q13907 227 aa12.34□□□□□ -0.43
CNOT4-210ENST00000491203 SETD1BQ9UPS6 1966 aaKnown RBP12.33□□□□□ -0.44
CNOT4-210ENST00000491203 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
CNOT4-210ENST00000491203 UHRF1BP1Q6BDS2 1440 aa12.33□□□□□ -0.44
CNOT4-210ENST00000491203 UGGT1Q9NYU2 1555 aa12.33□□□□□ -0.44
CNOT4-210ENST00000491203 MYO3AQ8NEV4 1616 aa12.33□□□□□ -0.44
CNOT4-210ENST00000491203 CHGAP10645 457 aaKnown RBP12.32□□□□□ -0.44
CNOT4-210ENST00000491203 CLTCL1P53675 1640 aa12.32□□□□□ -0.44
CNOT4-210ENST00000491203 PIK3C2BO00750 1634 aa12.31□□□□□ -0.44
CNOT4-210ENST00000491203 A2ML1A8K2U0 1454 aa12.31□□□□□ -0.44
CNOT4-210ENST00000491203 CLSPNQ9HAW4 1339 aa12.31□□□□□ -0.44
CNOT4-210ENST00000491203 POTEB3A0JP26 581 aa12.3□□□□□ -0.44
CNOT4-210ENST00000491203 POTEBQ6S5H4 581 aa12.3□□□□□ -0.44
CNOT4-210ENST00000491203 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
CNOT4-210ENST00000491203 SIN3AQ96ST3 1273 aa12.29□□□□□ -0.44
CNOT4-210ENST00000491203 CEP170BQ9Y4F5 1589 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-210ENST00000491203 ADGRB3O60242 1522 aa12.28□□□□□ -0.44
CNOT4-210ENST00000491203 ZNF142P52746 1687 aaPredicted RBP12.27□□□□□ -0.45
CNOT4-210ENST00000491203 ZNF326Q5BKZ1 582 aaKnown RBP12.27□□□□□ -0.45
CNOT4-210ENST00000491203 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
CNOT4-210ENST00000491203 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.45
CNOT4-210ENST00000491203 KIF1BO60333 1816 aa12.27□□□□□ -0.45
CNOT4-210ENST00000491203 TMEM131LA2VDJ0 1609 aa12.26□□□□□ -0.45
CNOT4-210ENST00000491203 PPP1R37O75864 691 aa12.26□□□□□ -0.45
CNOT4-210ENST00000491203 RGL3Q3MIN7 710 aa12.26□□□□□ -0.45
CNOT4-210ENST00000491203 SPATA31E1Q6ZUB1 1445 aa12.26□□□□□ -0.45
CNOT4-210ENST00000491203 UBR1Q8IWV7 1749 aa12.25□□□□□ -0.45
CNOT4-210ENST00000491203 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
CNOT4-210ENST00000491203 KDM5AP29375 1690 aaKnown RBP12.25□□□□□ -0.45
CNOT4-210ENST00000491203 NEURL4Q96JN8 1562 aa12.24□□□□□ -0.45
CNOT4-210ENST00000491203 TMEM2Q9UHN6 1383 aa12.23□□□□□ -0.45
CNOT4-210ENST00000491203 RPGRIP1LQ68CZ1 1315 aa12.23□□□□□ -0.45
CNOT4-210ENST00000491203 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
CNOT4-210ENST00000491203 HSPA2P54652 639 aa12.23□□□□□ -0.45
CNOT4-210ENST00000491203 EMP3P54852 163 aa12.23□□□□□ -0.45
CNOT4-210ENST00000491203 RIMS2Q9UQ26 1411 aa12.22□□□□□ -0.45
CNOT4-210ENST00000491203 TONSLQ96HA7 1378 aa12.22□□□□□ -0.45
CNOT4-210ENST00000491203 EID1Q9Y6B2 187 aa12.22□□□□□ -0.45
CNOT4-210ENST00000491203 MYO5BQ9ULV0 1848 aa12.22□□□□□ -0.45
CNOT4-210ENST00000491203 KIF3CO14782 793 aa12.21□□□□□ -0.45
CNOT4-210ENST00000491203 PPP1R15AO75807 674 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-210ENST00000491203 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-210ENST00000491203 TXNDC2Q86VQ3 553 aa12.21□□□□□ -0.45
CNOT4-210ENST00000491203 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.21□□□□□ -0.45
CNOT4-210ENST00000491203 SLIT1O75093 1534 aa12.21□□□□□ -0.46
CNOT4-210ENST00000491203 ARHGAP23Q9P227 1491 aa12.21□□□□□ -0.46
CNOT4-210ENST00000491203 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
CNOT4-210ENST00000491203 NUTM2DQ5VT03 806 aaPredicted RBP12.2□□□□□ -0.46
CNOT4-210ENST00000491203 ANKLE2Q86XL3 938 aa12.2□□□□□ -0.46
CNOT4-210ENST00000491203 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
CNOT4-210ENST00000491203 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
CNOT4-210ENST00000491203 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
CNOT4-210ENST00000491203 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
CNOT4-210ENST00000491203 NEXMIFQ5QGS0 1516 aa12.19□□□□□ -0.46
CNOT4-210ENST00000491203 FAM205CA6NFA0 338 aa12.18□□□□□ -0.46
CNOT4-210ENST00000491203 LTKP29376 864 aa12.18□□□□□ -0.46
CNOT4-210ENST00000491203 STAC3Q96MF2 364 aa12.18□□□□□ -0.46
CNOT4-210ENST00000491203 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms