RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 KDM2AQ9Y2K7 1162 aa25.55■■□□□ 1.68
MRPL28-207ENST00000461550 CDC42BPGQ6DT37 1551 aa25.55■■□□□ 1.68
MRPL28-207ENST00000461550 ORAI2Q96SN7 254 aa25.53■■□□□ 1.68
MRPL28-207ENST00000461550 DCAF11Q8TEB1 546 aa25.53■■□□□ 1.68
MRPL28-207ENST00000461550 LRP6O75581 1613 aa25.52■■□□□ 1.68
MRPL28-207ENST00000461550 DHX57Q6P158 1386 aaKnown RBP25.5■■□□□ 1.67
MRPL28-207ENST00000461550 NUTM2FA1L443 756 aa25.48■■□□□ 1.67
MRPL28-207ENST00000461550 SPATA31A6Q5VVP1 1343 aa25.48■■□□□ 1.67
MRPL28-207ENST00000461550 ADGRB1O14514 1584 aa25.46■■□□□ 1.67
MRPL28-207ENST00000461550 NUTM2BA6NNL0 878 aaPredicted RBP25.45■■□□□ 1.66
MRPL28-207ENST00000461550 NUTM2EB1AL46 878 aaPredicted RBP25.45■■□□□ 1.66
MRPL28-207ENST00000461550 SAFB2Q14151 953 aaKnown RBP eCLIP25.45■■□□□ 1.66
MRPL28-207ENST00000461550 NUTM2AQ8IVF1 878 aaPredicted RBP25.45■■□□□ 1.66
MRPL28-207ENST00000461550 FMN2Q9NZ56 1722 aa25.45■■□□□ 1.66
MRPL28-207ENST00000461550 ESCO1Q5FWF5 840 aa25.44■■□□□ 1.66
MRPL28-207ENST00000461550 MEX3CQ5U5Q3 659 aaKnown RBP25.43■■□□□ 1.66
MRPL28-207ENST00000461550 POTEAQ6S8J7 498 aa25.43■■□□□ 1.66
MRPL28-207ENST00000461550 LRRC59Q96AG4 307 aaKnown RBP25.43■■□□□ 1.66
MRPL28-207ENST00000461550 PRAM1Q96QH2 718 aa25.43■■□□□ 1.66
MRPL28-207ENST00000461550 SIRT1Q96EB6 747 aa25.41■■□□□ 1.66
MRPL28-207ENST00000461550 PNPLA6Q8IY17 1366 aa25.41■■□□□ 1.66
MRPL28-207ENST00000461550 DLC1Q96QB1 1528 aa25.4■■□□□ 1.66
MRPL28-207ENST00000461550 TRAK1Q9UPV9 953 aa25.4■■□□□ 1.66
MRPL28-207ENST00000461550 RGPD8O14715 1765 aaPredicted RBP25.39■■□□□ 1.65
MRPL28-207ENST00000461550 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.65
MRPL28-207ENST00000461550 POGKQ9P215 609 aa25.38■■□□□ 1.65
MRPL28-207ENST00000461550 XPCQ01831 940 aaPredicted RBP25.37■■□□□ 1.65
MRPL28-207ENST00000461550 STAC3Q96MF2 364 aa25.36■■□□□ 1.65
MRPL28-207ENST00000461550 FOXO3O43524 673 aa25.35■■□□□ 1.65
MRPL28-207ENST00000461550 NPHP3Q7Z494 1330 aa25.34■■□□□ 1.65
MRPL28-207ENST00000461550 PXDNQ92626 1479 aa25.34■■□□□ 1.65
MRPL28-207ENST00000461550 HIRIP3Q9BW71 556 aaPredicted RBP25.32■■□□□ 1.64
MRPL28-207ENST00000461550 ARHGEF28Q8N1W1 1705 aaKnown RBP25.31■■□□□ 1.64
MRPL28-207ENST00000461550 KIF1AQ12756 1690 aa25.31■■□□□ 1.64
MRPL28-207ENST00000461550 ADGRB2O60241 1585 aa25.3■■□□□ 1.64
MRPL28-207ENST00000461550 MINK1Q8N4C8 1332 aaPredicted RBP25.3■■□□□ 1.64
MRPL28-207ENST00000461550 SIN3AQ96ST3 1273 aa25.29■■□□□ 1.64
MRPL28-207ENST00000461550 USP32Q8NFA0 1604 aa25.29■■□□□ 1.64
MRPL28-207ENST00000461550 ADAMTS2O95450 1211 aa25.28■■□□□ 1.64
MRPL28-207ENST00000461550 C8orf37Q96NL8 207 aa25.28■■□□□ 1.64
MRPL28-207ENST00000461550 KIAA1210Q9ULL0 1709 aa25.28■■□□□ 1.64
MRPL28-207ENST00000461550 COL22A1Q8NFW1 1626 aaPredicted RBP25.27■■□□□ 1.64
MRPL28-207ENST00000461550 AFF2P51816 1311 aa25.27■■□□□ 1.64
MRPL28-207ENST00000461550 ZNF772Q68DY9 489 aaPredicted RBP25.26■■□□□ 1.63
MRPL28-207ENST00000461550 PHF8Q9UPP1 1060 aa25.25■■□□□ 1.63
MRPL28-207ENST00000461550 NEUROD1Q13562 356 aa25.24■■□□□ 1.63
MRPL28-207ENST00000461550 NBPF1Q3BBV0 1214 aa25.24■■□□□ 1.63
MRPL28-207ENST00000461550 L3MBTL2Q969R5 705 aa25.22■■□□□ 1.63
MRPL28-207ENST00000461550 ANKARQ7Z5J8 1434 aa25.21■■□□□ 1.63
MRPL28-207ENST00000461550 KRT28Q7Z3Y7 464 aa25.21■■□□□ 1.63
MRPL28-207ENST00000461550 PMFBP1Q8TBY8 1022 aa25.21■■□□□ 1.63
MRPL28-207ENST00000461550 PRR36Q9H6K5 1346 aa25.19■■□□□ 1.62
MRPL28-207ENST00000461550 TULP4Q9NRJ4 1543 aa25.19■■□□□ 1.62
MRPL28-207ENST00000461550 WASLO00401 505 aaPredicted RBP25.19■■□□□ 1.62
MRPL28-207ENST00000461550 TRIM26Q12899 539 aaPredicted RBP25.19■■□□□ 1.62
MRPL28-207ENST00000461550 NGLY1Q96IV0 654 aa25.19■■□□□ 1.62
MRPL28-207ENST00000461550 SPATA31A3Q5VYP0 1347 aa25.18■■□□□ 1.62
MRPL28-207ENST00000461550 MARF1Q9Y4F3 1742 aaKnown RBP25.16■■□□□ 1.62
MRPL28-207ENST00000461550 PLEKHG5O94827 1062 aa25.15■■□□□ 1.62
MRPL28-207ENST00000461550 EIF3AQ14152 1382 aaKnown RBP25.14■■□□□ 1.62
MRPL28-207ENST00000461550 TNS3Q68CZ2 1445 aa25.14■■□□□ 1.62
MRPL28-207ENST00000461550 RXRBP28702 533 aa25.14■■□□□ 1.61
MRPL28-207ENST00000461550 PSME1Q06323 249 aa25.14■■□□□ 1.61
MRPL28-207ENST00000461550 TRPM1Q7Z4N2 1603 aa25.12■■□□□ 1.61
MRPL28-207ENST00000461550 ATP7BP35670 1465 aa25.11■■□□□ 1.61
MRPL28-207ENST00000461550 LMOD2Q6P5Q4 547 aa25.11■■□□□ 1.61
MRPL28-207ENST00000461550 QTRT2Q9H974 415 aaKnown RBP25.11■■□□□ 1.61
MRPL28-207ENST00000461550 ITSN1Q15811 1721 aa25.11■■□□□ 1.61
MRPL28-207ENST00000461550 TRPM3Q9HCF6 1732 aaPredicted RBP25.1■■□□□ 1.61
MRPL28-207ENST00000461550 USP21Q9UK80 565 aa25.09■■□□□ 1.61
MRPL28-207ENST00000461550 SBNO1A3KN83 1393 aa25.09■■□□□ 1.61
MRPL28-207ENST00000461550 CABLES1Q8TDN4 633 aa25.09■■□□□ 1.61
MRPL28-207ENST00000461550 CDK19Q9BWU1 502 aa25.09■■□□□ 1.61
MRPL28-207ENST00000461550 QRICH2Q9H0J4 1663 aa25.08■■□□□ 1.61
MRPL28-207ENST00000461550 ABCA3Q99758 1704 aa25.08■■□□□ 1.6
MRPL28-207ENST00000461550 NUDT16Q96DE0 195 aaKnown RBP25.08■■□□□ 1.6
MRPL28-207ENST00000461550 CENPJQ9HC77 1338 aaPredicted RBP25.06■■□□□ 1.6
MRPL28-207ENST00000461550 FNBP4Q8N3X1 1017 aaPredicted RBP25.06■■□□□ 1.6
MRPL28-207ENST00000461550 NGDNQ8NEJ9 315 aaKnown RBP25.06■■□□□ 1.6
MRPL28-207ENST00000461550 GPRASP1Q5JY77 1395 aa25.06■■□□□ 1.6
MRPL28-207ENST00000461550 TOPAZ1Q8N9V7 1692 aa25.06■■□□□ 1.6
MRPL28-207ENST00000461550 ALS2Q96Q42 1657 aa25.04■■□□□ 1.6
MRPL28-207ENST00000461550 HAP1P54257 671 aaPredicted RBP25.04■■□□□ 1.6
MRPL28-207ENST00000461550 ARHGEF10O15013 1369 aa25.04■■□□□ 1.6
MRPL28-207ENST00000461550 CDK12Q9NYV4 1490 aaPredicted RBP25.04■■□□□ 1.6
MRPL28-207ENST00000461550 RBM6P78332 1123 aaKnown RBP25.03■■□□□ 1.6
MRPL28-207ENST00000461550 RGS12O14924 1447 aa25.03■■□□□ 1.6
MRPL28-207ENST00000461550 ROCK2O75116 1388 aaKnown RBP25.02■■□□□ 1.6
MRPL28-207ENST00000461550 BCL9LQ86UU0 1499 aa25.02■■□□□ 1.6
MRPL28-207ENST00000461550 NBPF8Q3BBV2 869 aa25.02■■□□□ 1.6
MRPL28-207ENST00000461550 TRPC5Q9UL62 973 aaPredicted RBP25.01■■□□□ 1.59
MRPL28-207ENST00000461550 ATRNO75882 1429 aa25■■□□□ 1.59
MRPL28-207ENST00000461550 PAK3O75914 559 aaPredicted RBP25■■□□□ 1.59
MRPL28-207ENST00000461550 SRPK2P78362 688 aaKnown RBP24.98■■□□□ 1.59
MRPL28-207ENST00000461550 TONSLQ96HA7 1378 aa24.98■■□□□ 1.59
MRPL28-207ENST00000461550 CABP2Q9NPB3 220 aa24.97■■□□□ 1.59
MRPL28-207ENST00000461550 PLCH1Q4KWH8 1693 aa24.97■■□□□ 1.59
MRPL28-207ENST00000461550 SLIT2O94813 1529 aa24.97■■□□□ 1.59
MRPL28-207ENST00000461550 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.97■■□□□ 1.59
MRPL28-207ENST00000461550 CCDC61Q9Y6R9 512 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms