RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 DHX57Q6P158 1386 aaKnown RBP22.42■■□□□ 1.18
VARS-219ENST00000461328 DCAF11Q8TEB1 546 aa22.42■■□□□ 1.18
VARS-219ENST00000461328 DDX17Q92841 729 aaKnown RBP22.42■■□□□ 1.18
VARS-219ENST00000461328 KDM2AQ9Y2K7 1162 aa22.42■■□□□ 1.18
VARS-219ENST00000461328 PLEKHH1Q9ULM0 1364 aa22.41■■□□□ 1.18
VARS-219ENST00000461328 ORAI2Q96SN7 254 aa22.41■■□□□ 1.18
VARS-219ENST00000461328 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
VARS-219ENST00000461328 MEX3CQ5U5Q3 659 aaKnown RBP22.39■■□□□ 1.17
VARS-219ENST00000461328 LRRC59Q96AG4 307 aaKnown RBP22.39■■□□□ 1.17
VARS-219ENST00000461328 LRP6O75581 1613 aa22.38■■□□□ 1.17
VARS-219ENST00000461328 SIRT1Q96EB6 747 aa22.37■■□□□ 1.17
VARS-219ENST00000461328 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
VARS-219ENST00000461328 NUTM2BA6NNL0 878 aaPredicted RBP22.35■■□□□ 1.17
VARS-219ENST00000461328 NUTM2EB1AL46 878 aaPredicted RBP22.35■■□□□ 1.17
VARS-219ENST00000461328 ESCO1Q5FWF5 840 aa22.35■■□□□ 1.17
VARS-219ENST00000461328 NUTM2AQ8IVF1 878 aaPredicted RBP22.35■■□□□ 1.17
VARS-219ENST00000461328 NUTM2FA1L443 756 aa22.34■■□□□ 1.17
VARS-219ENST00000461328 PRAM1Q96QH2 718 aa22.33■■□□□ 1.17
VARS-219ENST00000461328 ADGRB1O14514 1584 aa22.33■■□□□ 1.16
VARS-219ENST00000461328 POTEAQ6S8J7 498 aa22.32■■□□□ 1.16
VARS-219ENST00000461328 POGKQ9P215 609 aa22.32■■□□□ 1.16
VARS-219ENST00000461328 PNPLA6Q8IY17 1366 aa22.32■■□□□ 1.16
VARS-219ENST00000461328 SOS2Q07890 1332 aaPredicted RBP22.31■■□□□ 1.16
VARS-219ENST00000461328 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
VARS-219ENST00000461328 SAFB2Q14151 953 aaKnown RBP eCLIP22.31■■□□□ 1.16
VARS-219ENST00000461328 NPHP3Q7Z494 1330 aa22.31■■□□□ 1.16
VARS-219ENST00000461328 FMN2Q9NZ56 1722 aa22.3■■□□□ 1.16
VARS-219ENST00000461328 TRAK1Q9UPV9 953 aa22.29■■□□□ 1.16
VARS-219ENST00000461328 FOXO3O43524 673 aa22.27■■□□□ 1.16
VARS-219ENST00000461328 ZNF772Q68DY9 489 aaPredicted RBP22.25■■□□□ 1.15
VARS-219ENST00000461328 PXDNQ92626 1479 aa22.24■■□□□ 1.15
VARS-219ENST00000461328 XPCQ01831 940 aaPredicted RBP22.24■■□□□ 1.15
VARS-219ENST00000461328 KIF1AQ12756 1690 aa22.23■■□□□ 1.15
VARS-219ENST00000461328 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
VARS-219ENST00000461328 SIN3AQ96ST3 1273 aa22.21■■□□□ 1.15
VARS-219ENST00000461328 ADGRB2O60241 1585 aa22.21■■□□□ 1.15
VARS-219ENST00000461328 ADAMTS2O95450 1211 aa22.2■■□□□ 1.14
VARS-219ENST00000461328 C8orf37Q96NL8 207 aa22.2■■□□□ 1.14
VARS-219ENST00000461328 HIRIP3Q9BW71 556 aaPredicted RBP22.2■■□□□ 1.14
VARS-219ENST00000461328 AFF2P51816 1311 aa22.2■■□□□ 1.14
VARS-219ENST00000461328 MINK1Q8N4C8 1332 aaPredicted RBP22.2■■□□□ 1.14
VARS-219ENST00000461328 PHF8Q9UPP1 1060 aa22.19■■□□□ 1.14
VARS-219ENST00000461328 RGPD8O14715 1765 aaPredicted RBP22.18■■□□□ 1.14
VARS-219ENST00000461328 COL22A1Q8NFW1 1626 aaPredicted RBP22.18■■□□□ 1.14
VARS-219ENST00000461328 ANKARQ7Z5J8 1434 aa22.17■■□□□ 1.14
VARS-219ENST00000461328 KIAA1210Q9ULL0 1709 aa22.17■■□□□ 1.14
VARS-219ENST00000461328 EIF3AQ14152 1382 aaKnown RBP22.16■■□□□ 1.14
VARS-219ENST00000461328 KRT28Q7Z3Y7 464 aa22.16■■□□□ 1.14
VARS-219ENST00000461328 ARHGEF28Q8N1W1 1705 aaKnown RBP22.16■■□□□ 1.14
VARS-219ENST00000461328 L3MBTL2Q969R5 705 aa22.15■■□□□ 1.14
VARS-219ENST00000461328 NGLY1Q96IV0 654 aa22.15■■□□□ 1.14
VARS-219ENST00000461328 USP32Q8NFA0 1604 aa22.13■■□□□ 1.13
VARS-219ENST00000461328 SPATA31A3Q5VYP0 1347 aa22.13■■□□□ 1.13
VARS-219ENST00000461328 WASLO00401 505 aaPredicted RBP22.13■■□□□ 1.13
VARS-219ENST00000461328 PSME1Q06323 249 aa22.13■■□□□ 1.13
VARS-219ENST00000461328 TULP4Q9NRJ4 1543 aa22.12■■□□□ 1.13
VARS-219ENST00000461328 RXRBP28702 533 aa22.12■■□□□ 1.13
VARS-219ENST00000461328 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
VARS-219ENST00000461328 PMFBP1Q8TBY8 1022 aa22.12■■□□□ 1.13
VARS-219ENST00000461328 PRR36Q9H6K5 1346 aa22.09■■□□□ 1.13
VARS-219ENST00000461328 TNS3Q68CZ2 1445 aa22.09■■□□□ 1.13
VARS-219ENST00000461328 QTRT2Q9H974 415 aaKnown RBP22.08■■□□□ 1.13
VARS-219ENST00000461328 USP21Q9UK80 565 aa22.07■■□□□ 1.12
VARS-219ENST00000461328 SBNO1A3KN83 1393 aa22.07■■□□□ 1.12
VARS-219ENST00000461328 TONSLQ96HA7 1378 aa22.07■■□□□ 1.12
VARS-219ENST00000461328 LMOD2Q6P5Q4 547 aa22.06■■□□□ 1.12
VARS-219ENST00000461328 GPRASP1Q5JY77 1395 aa22.05■■□□□ 1.12
VARS-219ENST00000461328 HAP1P54257 671 aaPredicted RBP22.05■■□□□ 1.12
VARS-219ENST00000461328 ARHGEF10O15013 1369 aa22.04■■□□□ 1.12
VARS-219ENST00000461328 PLEKHG5O94827 1062 aa22.04■■□□□ 1.12
VARS-219ENST00000461328 RBM6P78332 1123 aaKnown RBP22.04■■□□□ 1.12
VARS-219ENST00000461328 FNBP4Q8N3X1 1017 aaPredicted RBP22.04■■□□□ 1.12
VARS-219ENST00000461328 CDK19Q9BWU1 502 aa22.04■■□□□ 1.12
VARS-219ENST00000461328 PCGF6Q9BYE7 350 aa22.04■■□□□ 1.12
VARS-219ENST00000461328 CDK12Q9NYV4 1490 aaPredicted RBP22.03■■□□□ 1.12
VARS-219ENST00000461328 MARF1Q9Y4F3 1742 aaKnown RBP22.03■■□□□ 1.12
VARS-219ENST00000461328 NGDNQ8NEJ9 315 aaKnown RBP22.03■■□□□ 1.12
VARS-219ENST00000461328 NUDT16Q96DE0 195 aaKnown RBP22.03■■□□□ 1.12
VARS-219ENST00000461328 ATP7BP35670 1465 aa22.03■■□□□ 1.12
VARS-219ENST00000461328 CENPJQ9HC77 1338 aaPredicted RBP22.02■■□□□ 1.12
VARS-219ENST00000461328 ITSN1Q15811 1721 aa22.01■■□□□ 1.11
VARS-219ENST00000461328 TRPC5Q9UL62 973 aaPredicted RBP22.01■■□□□ 1.11
VARS-219ENST00000461328 ROCK2O75116 1388 aaKnown RBP22■■□□□ 1.11
VARS-219ENST00000461328 TRPM1Q7Z4N2 1603 aa22■■□□□ 1.11
VARS-219ENST00000461328 CABLES1Q8TDN4 633 aa22■■□□□ 1.11
VARS-219ENST00000461328 TRPM3Q9HCF6 1732 aaPredicted RBP21.98■■□□□ 1.11
VARS-219ENST00000461328 RGS12O14924 1447 aa21.97■■□□□ 1.11
VARS-219ENST00000461328 ATRNO75882 1429 aa21.97■■□□□ 1.11
VARS-219ENST00000461328 QRICH2Q9H0J4 1663 aa21.97■■□□□ 1.11
VARS-219ENST00000461328 BCL9LQ86UU0 1499 aa21.96■■□□□ 1.11
VARS-219ENST00000461328 PAK3O75914 559 aaPredicted RBP21.96■■□□□ 1.11
VARS-219ENST00000461328 SRPK2P78362 688 aaKnown RBP21.96■■□□□ 1.11
VARS-219ENST00000461328 CCDC61Q9Y6R9 512 aa21.96■■□□□ 1.11
VARS-219ENST00000461328 ABCA3Q99758 1704 aa21.94■■□□□ 1.1
VARS-219ENST00000461328 TOPAZ1Q8N9V7 1692 aa21.94■■□□□ 1.1
VARS-219ENST00000461328 ALS2Q96Q42 1657 aa21.94■■□□□ 1.1
VARS-219ENST00000461328 NBPF8Q3BBV2 869 aa21.93■■□□□ 1.1
VARS-219ENST00000461328 SLIT2O94813 1529 aa21.92■■□□□ 1.1
VARS-219ENST00000461328 ACEP12821 1306 aa21.92■■□□□ 1.1
VARS-219ENST00000461328 UNC5CLQ8IV45 518 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms