RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 DNTTIP2Q5QJE6 756 aaKnown RBP21.59■■□□□ 1.05
TCF3-204ENST00000453954 GAS2L3Q86XJ1 694 aa21.59■■□□□ 1.05
TCF3-204ENST00000453954 RAPGEF6Q8TEU7 1601 aa21.59■■□□□ 1.05
TCF3-204ENST00000453954 CABP2Q9NPB3 220 aa21.58■■□□□ 1.05
TCF3-204ENST00000453954 TRIM27P14373 513 aa21.58■■□□□ 1.05
TCF3-204ENST00000453954 NASPP49321 788 aaPredicted RBP21.58■■□□□ 1.05
TCF3-204ENST00000453954 RNF214Q8ND24 703 aa21.58■■□□□ 1.05
TCF3-204ENST00000453954 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
TCF3-204ENST00000453954 FAM135AQ9P2D6 1515 aa21.58■■□□□ 1.05
TCF3-204ENST00000453954 FBLN1P23142 703 aa21.58■■□□□ 1.04
TCF3-204ENST00000453954 CLCN1P35523 988 aa21.58■■□□□ 1.04
TCF3-204ENST00000453954 CAVIN1Q6NZI2 390 aaKnown RBP21.58■■□□□ 1.04
TCF3-204ENST00000453954 THUMPD2Q9BTF0 503 aaKnown RBP21.58■■□□□ 1.04
TCF3-204ENST00000453954 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.04
TCF3-204ENST00000453954 SPAG9O60271 1321 aaKnown RBP21.57■■□□□ 1.04
TCF3-204ENST00000453954 ERBB4Q15303 1308 aa21.57■■□□□ 1.04
TCF3-204ENST00000453954 PTPRGP23470 1445 aa21.57■■□□□ 1.04
TCF3-204ENST00000453954 MAGI1Q96QZ7 1491 aaPredicted RBP21.56■■□□□ 1.04
TCF3-204ENST00000453954 RIPK4P57078 832 aa21.56■■□□□ 1.04
TCF3-204ENST00000453954 POLR1AO95602 1720 aaPredicted RBP21.54■■□□□ 1.04
TCF3-204ENST00000453954 ARHGEF12Q9NZN5 1544 aa21.54■■□□□ 1.04
TCF3-204ENST00000453954 DDX19BQ9UMR2 479 aa21.53■■□□□ 1.04
TCF3-204ENST00000453954 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
TCF3-204ENST00000453954 CALD1Q05682 793 aaKnown RBP21.53■■□□□ 1.04
TCF3-204ENST00000453954 CHAMP1Q96JM3 812 aa21.53■■□□□ 1.04
TCF3-204ENST00000453954 EFCAB2Q5VUJ9 269 aa21.53■■□□□ 1.04
TCF3-204ENST00000453954 TRMT2AQ8IZ69 625 aaKnown RBP21.53■■□□□ 1.04
TCF3-204ENST00000453954 HMOX1P09601 288 aa21.52■■□□□ 1.04
TCF3-204ENST00000453954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.52■■□□□ 1.04
TCF3-204ENST00000453954 RSPH4AQ5TD94 716 aa21.52■■□□□ 1.04
TCF3-204ENST00000453954 ARHGAP5Q13017 1502 aa21.52■■□□□ 1.04
TCF3-204ENST00000453954 NSD3Q9BZ95 1437 aa21.51■■□□□ 1.03
TCF3-204ENST00000453954 SOX12O15370 315 aa21.5■■□□□ 1.03
TCF3-204ENST00000453954 KIAA0556O60303 1618 aa21.5■■□□□ 1.03
TCF3-204ENST00000453954 ATF7IPQ6VMQ6 1270 aa21.5■■□□□ 1.03
TCF3-204ENST00000453954 XPCQ01831 940 aaPredicted RBP21.49■■□□□ 1.03
TCF3-204ENST00000453954 CD2BP2O95400 341 aaKnown RBP21.49■■□□□ 1.03
TCF3-204ENST00000453954 PLPPR3Q6T4P5 718 aa21.49■■□□□ 1.03
TCF3-204ENST00000453954 ATP10BO94823 1461 aa21.49■■□□□ 1.03
TCF3-204ENST00000453954 RRP9O43818 475 aaKnown RBP21.48■■□□□ 1.03
TCF3-204ENST00000453954 PLA2R1Q13018 1463 aa21.48■■□□□ 1.03
TCF3-204ENST00000453954 CCDC141Q6ZP82 1450 aa21.48■■□□□ 1.03
TCF3-204ENST00000453954 IPO8O15397 1037 aaKnown RBP21.47■■□□□ 1.03
TCF3-204ENST00000453954 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
TCF3-204ENST00000453954 PRPF40AO75400 957 aaKnown RBP21.47■■□□□ 1.03
TCF3-204ENST00000453954 BCL11BQ9C0K0 894 aaPredicted RBP21.47■■□□□ 1.03
TCF3-204ENST00000453954 RBM27Q9P2N5 1060 aaKnown RBP21.47■■□□□ 1.03
TCF3-204ENST00000453954 ASXL1Q8IXJ9 1541 aa21.46■■□□□ 1.03
TCF3-204ENST00000453954 GPRASP1Q5JY77 1395 aa21.46■■□□□ 1.03
TCF3-204ENST00000453954 FSD2A1L4K1 749 aa21.46■■□□□ 1.03
TCF3-204ENST00000453954 PRDM10Q9NQV6 1147 aa21.46■■□□□ 1.03
TCF3-204ENST00000453954 WDR7Q9Y4E6 1490 aa21.45■■□□□ 1.02
TCF3-204ENST00000453954 CHD1LQ86WJ1 897 aa21.45■■□□□ 1.02
TCF3-204ENST00000453954 MINK1Q8N4C8 1332 aaPredicted RBP21.45■■□□□ 1.02
TCF3-204ENST00000453954 GAS2L2Q8NHY3 880 aa21.45■■□□□ 1.02
TCF3-204ENST00000453954 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
TCF3-204ENST00000453954 WDR63Q8IWG1 891 aa21.43■■□□□ 1.02
TCF3-204ENST00000453954 KDM5DQ9BY66 1539 aa21.43■■□□□ 1.02
TCF3-204ENST00000453954 CEP170Q5SW79 1584 aa21.41■■□□□ 1.02
TCF3-204ENST00000453954 K7ELQ4 463 aaPredicted RBP21.41■■□□□ 1.02
TCF3-204ENST00000453954 TMPOP42166 694 aaKnown RBP21.41■■□□□ 1.02
TCF3-204ENST00000453954 TBC1D9Q6ZT07 1266 aa21.4■■□□□ 1.02
TCF3-204ENST00000453954 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.01
TCF3-204ENST00000453954 SYNJ2O15056 1496 aa21.39■■□□□ 1.01
TCF3-204ENST00000453954 SKOR2Q2VWA4 1001 aaPredicted RBP21.38■■□□□ 1.01
TCF3-204ENST00000453954 KANK1Q14678 1352 aa21.38■■□□□ 1.01
TCF3-204ENST00000453954 INSRP06213 1382 aa21.38■■□□□ 1.01
TCF3-204ENST00000453954 PKP1Q13835 747 aa21.37■■□□□ 1.01
TCF3-204ENST00000453954 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
TCF3-204ENST00000453954 SCAF11Q99590 1463 aaKnown RBP21.37■■□□□ 1.01
TCF3-204ENST00000453954 SMARCA5O60264 1052 aaPredicted RBP21.37■■□□□ 1.01
TCF3-204ENST00000453954 DTNBO60941 627 aa21.37■■□□□ 1.01
TCF3-204ENST00000453954 C16orf71Q8IYS4 520 aaPredicted RBP21.37■■□□□ 1.01
TCF3-204ENST00000453954 PIK3C2GO75747 1445 aa21.37■■□□□ 1.01
TCF3-204ENST00000453954 SLC4A10Q6U841 1118 aa21.36■■□□□ 1.01
TCF3-204ENST00000453954 ATAD2Q6PL18 1390 aa21.36■■□□□ 1.01
TCF3-204ENST00000453954 ADGBQ8N7X0 1667 aa21.36■■□□□ 1.01
TCF3-204ENST00000453954 A0A0U1RQG5 324 aaPredicted RBP21.36■■□□□ 1.01
TCF3-204ENST00000453954 STAG3Q9UJ98 1225 aa21.36■■□□□ 1.01
TCF3-204ENST00000453954 BAG4O95429 457 aaKnown RBP21.35■■□□□ 1.01
TCF3-204ENST00000453954 PRKAR2BP31323 418 aa21.35■■□□□ 1.01
TCF3-204ENST00000453954 SYCE3A1L190 88 aa21.35■■□□□ 1.01
TCF3-204ENST00000453954 ZSCAN30Q86W11 494 aa21.35■■□□□ 1.01
TCF3-204ENST00000453954 NGEFQ8N5V2 710 aa21.35■■□□□ 1.01
TCF3-204ENST00000453954 DCTN1Q14203 1278 aa21.33■■□□□ 1.01
TCF3-204ENST00000453954 CCDC173Q0VFZ6 552 aa21.33■■□□□ 1.01
TCF3-204ENST00000453954 FAM177BA6PVY3 158 aa21.33■■□□□ 1
TCF3-204ENST00000453954 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
TCF3-204ENST00000453954 UQCRHLA0A096LP55 91 aa21.32■■□□□ 1
TCF3-204ENST00000453954 UQCRHP07919 91 aa21.32■■□□□ 1
TCF3-204ENST00000453954 GDPD2Q9HCC8 539 aa21.32■■□□□ 1
TCF3-204ENST00000453954 DIAPH1O60610 1272 aaKnown RBP21.32■■□□□ 1
TCF3-204ENST00000453954 ZGPATQ8N5A5 531 aaKnown RBP21.32■■□□□ 1
TCF3-204ENST00000453954 TSHZ3Q63HK5 1081 aa21.31■■□□□ 1
TCF3-204ENST00000453954 TRPM1Q7Z4N2 1603 aa21.31■■□□□ 1
TCF3-204ENST00000453954 RAB3GAP1Q15042 981 aa21.31■■□□□ 1
TCF3-204ENST00000453954 TSPYL6Q8N831 410 aa21.3■■□□□ 1
TCF3-204ENST00000453954 TSC1Q92574 1164 aa21.3■■□□□ 1
TCF3-204ENST00000453954 PRIM1P49642 420 aaKnown RBP21.3■■□□□ 1
TCF3-204ENST00000453954 NUTM2FA1L443 756 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms