RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 PLEKHH1Q9ULM0 1364 aa29.81■■■□□ 2.36
UBE2D4-205ENST00000443780 KDM2AQ9Y2K7 1162 aa29.81■■■□□ 2.36
UBE2D4-205ENST00000443780 SIRT1Q96EB6 747 aa29.8■■■□□ 2.36
UBE2D4-205ENST00000443780 STAC3Q96MF2 364 aa29.8■■■□□ 2.36
UBE2D4-205ENST00000443780 RGS17Q9UGC6 210 aaPredicted RBP29.8■■■□□ 2.36
UBE2D4-205ENST00000443780 SPATA31A6Q5VVP1 1343 aa29.78■■■□□ 2.36
UBE2D4-205ENST00000443780 DDX17Q92841 729 aaKnown RBP29.78■■■□□ 2.36
UBE2D4-205ENST00000443780 ORAI2Q96SN7 254 aa29.78■■■□□ 2.36
UBE2D4-205ENST00000443780 ADGRB1O14514 1584 aa29.75■■■□□ 2.35
UBE2D4-205ENST00000443780 FMN2Q9NZ56 1722 aa29.74■■■□□ 2.35
UBE2D4-205ENST00000443780 LRRC59Q96AG4 307 aaKnown RBP29.74■■■□□ 2.35
UBE2D4-205ENST00000443780 LRP6O75581 1613 aa29.74■■■□□ 2.35
UBE2D4-205ENST00000443780 DLC1Q96QB1 1528 aa29.72■■■□□ 2.35
UBE2D4-205ENST00000443780 ESCO1Q5FWF5 840 aa29.69■■■□□ 2.34
UBE2D4-205ENST00000443780 PRAM1Q96QH2 718 aa29.69■■■□□ 2.34
UBE2D4-205ENST00000443780 RGPD8O14715 1765 aaPredicted RBP29.69■■■□□ 2.34
UBE2D4-205ENST00000443780 SOS2Q07890 1332 aaPredicted RBP29.68■■■□□ 2.34
UBE2D4-205ENST00000443780 NUTM2FA1L443 756 aa29.67■■■□□ 2.34
UBE2D4-205ENST00000443780 PNPLA6Q8IY17 1366 aa29.65■■■□□ 2.34
UBE2D4-205ENST00000443780 SAFB2Q14151 953 aaKnown RBP eCLIP29.65■■■□□ 2.34
UBE2D4-205ENST00000443780 MEX3CQ5U5Q3 659 aaKnown RBP29.65■■■□□ 2.34
UBE2D4-205ENST00000443780 NUTM2BA6NNL0 878 aaPredicted RBP29.64■■■□□ 2.34
UBE2D4-205ENST00000443780 NUTM2EB1AL46 878 aaPredicted RBP29.64■■■□□ 2.34
UBE2D4-205ENST00000443780 POTEAQ6S8J7 498 aa29.64■■■□□ 2.34
UBE2D4-205ENST00000443780 NUTM2AQ8IVF1 878 aaPredicted RBP29.64■■■□□ 2.34
UBE2D4-205ENST00000443780 POGKQ9P215 609 aa29.64■■■□□ 2.34
UBE2D4-205ENST00000443780 TRAK1Q9UPV9 953 aa29.64■■■□□ 2.34
UBE2D4-205ENST00000443780 KIAA1210Q9ULL0 1709 aa29.62■■■□□ 2.33
UBE2D4-205ENST00000443780 NPHP3Q7Z494 1330 aa29.62■■■□□ 2.33
UBE2D4-205ENST00000443780 KIF1AQ12756 1690 aa29.6■■■□□ 2.33
UBE2D4-205ENST00000443780 FOXO3O43524 673 aa29.59■■■□□ 2.33
UBE2D4-205ENST00000443780 ADGRB2O60241 1585 aa29.59■■■□□ 2.33
UBE2D4-205ENST00000443780 ARHGEF28Q8N1W1 1705 aaKnown RBP29.59■■■□□ 2.33
UBE2D4-205ENST00000443780 PXDNQ92626 1479 aa29.58■■■□□ 2.33
UBE2D4-205ENST00000443780 COL22A1Q8NFW1 1626 aaPredicted RBP29.54■■■□□ 2.32
UBE2D4-205ENST00000443780 USP32Q8NFA0 1604 aa29.53■■■□□ 2.32
UBE2D4-205ENST00000443780 XPCQ01831 940 aaPredicted RBP29.53■■■□□ 2.32
UBE2D4-205ENST00000443780 SIN3AQ96ST3 1273 aa29.53■■■□□ 2.32
UBE2D4-205ENST00000443780 ZNF772Q68DY9 489 aaPredicted RBP29.52■■■□□ 2.32
UBE2D4-205ENST00000443780 MINK1Q8N4C8 1332 aaPredicted RBP29.51■■■□□ 2.32
UBE2D4-205ENST00000443780 HIRIP3Q9BW71 556 aaPredicted RBP29.51■■■□□ 2.31
UBE2D4-205ENST00000443780 PHF8Q9UPP1 1060 aa29.5■■■□□ 2.31
UBE2D4-205ENST00000443780 ANKARQ7Z5J8 1434 aa29.49■■■□□ 2.31
UBE2D4-205ENST00000443780 TRIM26Q12899 539 aaPredicted RBP29.49■■■□□ 2.31
UBE2D4-205ENST00000443780 L3MBTL2Q969R5 705 aa29.49■■■□□ 2.31
UBE2D4-205ENST00000443780 NBPF1Q3BBV0 1214 aa29.47■■■□□ 2.31
UBE2D4-205ENST00000443780 AFF2P51816 1311 aa29.46■■■□□ 2.31
UBE2D4-205ENST00000443780 C8orf37Q96NL8 207 aa29.46■■■□□ 2.31
UBE2D4-205ENST00000443780 ADAMTS2O95450 1211 aa29.45■■■□□ 2.31
UBE2D4-205ENST00000443780 NEUROD1Q13562 356 aa29.45■■■□□ 2.31
UBE2D4-205ENST00000443780 KRT28Q7Z3Y7 464 aa29.45■■■□□ 2.31
UBE2D4-205ENST00000443780 WASLO00401 505 aaPredicted RBP29.44■■■□□ 2.3
UBE2D4-205ENST00000443780 MARF1Q9Y4F3 1742 aaKnown RBP29.43■■■□□ 2.3
UBE2D4-205ENST00000443780 EIF3AQ14152 1382 aaKnown RBP29.43■■■□□ 2.3
UBE2D4-205ENST00000443780 TULP4Q9NRJ4 1543 aa29.43■■■□□ 2.3
UBE2D4-205ENST00000443780 SPATA31A3Q5VYP0 1347 aa29.43■■■□□ 2.3
UBE2D4-205ENST00000443780 PRR36Q9H6K5 1346 aa29.41■■■□□ 2.3
UBE2D4-205ENST00000443780 PMFBP1Q8TBY8 1022 aa29.4■■■□□ 2.3
UBE2D4-205ENST00000443780 NGLY1Q96IV0 654 aa29.4■■■□□ 2.3
UBE2D4-205ENST00000443780 PSME1Q06323 249 aa29.39■■■□□ 2.3
UBE2D4-205ENST00000443780 ITSN1Q15811 1721 aa29.38■■■□□ 2.29
UBE2D4-205ENST00000443780 TRPM1Q7Z4N2 1603 aa29.38■■■□□ 2.29
UBE2D4-205ENST00000443780 TNS3Q68CZ2 1445 aa29.36■■■□□ 2.29
UBE2D4-205ENST00000443780 SBNO1A3KN83 1393 aa29.35■■■□□ 2.29
UBE2D4-205ENST00000443780 RXRBP28702 533 aa29.34■■■□□ 2.29
UBE2D4-205ENST00000443780 TRPM3Q9HCF6 1732 aaPredicted RBP29.34■■■□□ 2.29
UBE2D4-205ENST00000443780 ATP7BP35670 1465 aa29.32■■■□□ 2.28
UBE2D4-205ENST00000443780 CDK19Q9BWU1 502 aa29.32■■■□□ 2.28
UBE2D4-205ENST00000443780 QTRT2Q9H974 415 aaKnown RBP29.32■■■□□ 2.28
UBE2D4-205ENST00000443780 FNBP4Q8N3X1 1017 aaPredicted RBP29.31■■■□□ 2.28
UBE2D4-205ENST00000443780 NUDT16Q96DE0 195 aaKnown RBP29.31■■■□□ 2.28
UBE2D4-205ENST00000443780 QRICH2Q9H0J4 1663 aa29.3■■■□□ 2.28
UBE2D4-205ENST00000443780 CENPJQ9HC77 1338 aaPredicted RBP29.29■■■□□ 2.28
UBE2D4-205ENST00000443780 USP21Q9UK80 565 aa29.29■■■□□ 2.28
UBE2D4-205ENST00000443780 GPRASP1Q5JY77 1395 aa29.28■■■□□ 2.28
UBE2D4-205ENST00000443780 ABCA3Q99758 1704 aa29.28■■■□□ 2.28
UBE2D4-205ENST00000443780 TOPAZ1Q8N9V7 1692 aa29.28■■■□□ 2.28
UBE2D4-205ENST00000443780 ARHGEF10O15013 1369 aa29.27■■■□□ 2.28
UBE2D4-205ENST00000443780 LMOD2Q6P5Q4 547 aa29.27■■■□□ 2.28
UBE2D4-205ENST00000443780 NGDNQ8NEJ9 315 aaKnown RBP29.27■■■□□ 2.28
UBE2D4-205ENST00000443780 CDK12Q9NYV4 1490 aaPredicted RBP29.27■■■□□ 2.28
UBE2D4-205ENST00000443780 ALS2Q96Q42 1657 aa29.27■■■□□ 2.28
UBE2D4-205ENST00000443780 RBM6P78332 1123 aaKnown RBP29.26■■■□□ 2.27
UBE2D4-205ENST00000443780 NBPF8Q3BBV2 869 aa29.23■■■□□ 2.27
UBE2D4-205ENST00000443780 CABLES1Q8TDN4 633 aa29.23■■■□□ 2.27
UBE2D4-205ENST00000443780 ROCK2O75116 1388 aaKnown RBP29.23■■■□□ 2.27
UBE2D4-205ENST00000443780 TRPC5Q9UL62 973 aaPredicted RBP29.22■■■□□ 2.27
UBE2D4-205ENST00000443780 BCL9LQ86UU0 1499 aa29.22■■■□□ 2.27
UBE2D4-205ENST00000443780 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.21■■■□□ 2.27
UBE2D4-205ENST00000443780 HAP1P54257 671 aaPredicted RBP29.21■■■□□ 2.27
UBE2D4-205ENST00000443780 CCDC61Q9Y6R9 512 aa29.21■■■□□ 2.27
UBE2D4-205ENST00000443780 PLEKHG5O94827 1062 aa29.2■■■□□ 2.26
UBE2D4-205ENST00000443780 ATRNO75882 1429 aa29.2■■■□□ 2.26
UBE2D4-205ENST00000443780 TONSLQ96HA7 1378 aa29.19■■■□□ 2.26
UBE2D4-205ENST00000443780 SLIT2O94813 1529 aa29.17■■■□□ 2.26
UBE2D4-205ENST00000443780 SRPK2P78362 688 aaKnown RBP29.17■■■□□ 2.26
UBE2D4-205ENST00000443780 RGS12O14924 1447 aa29.17■■■□□ 2.26
UBE2D4-205ENST00000443780 POLR3AO14802 1390 aaPredicted RBP29.16■■■□□ 2.26
UBE2D4-205ENST00000443780 PLEKHG3A1L390 1219 aa29.16■■■□□ 2.26
UBE2D4-205ENST00000443780 PLCH1Q4KWH8 1693 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms