RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 SPATA31A6Q5VVP1 1343 aa32.41■■■□□ 2.78
SEMA3B-205ENST00000434030 PLEKHH1Q9ULM0 1364 aa32.41■■■□□ 2.78
SEMA3B-205ENST00000434030 ORAI2Q96SN7 254 aa32.4■■■□□ 2.78
SEMA3B-205ENST00000434030 DHX57Q6P158 1386 aaKnown RBP32.4■■■□□ 2.78
SEMA3B-205ENST00000434030 DCAF11Q8TEB1 546 aa32.39■■■□□ 2.78
SEMA3B-205ENST00000434030 KDM2AQ9Y2K7 1162 aa32.39■■■□□ 2.78
SEMA3B-205ENST00000434030 SIRT1Q96EB6 747 aa32.38■■■□□ 2.77
SEMA3B-205ENST00000434030 LRRC59Q96AG4 307 aaKnown RBP32.36■■■□□ 2.77
SEMA3B-205ENST00000434030 LRP6O75581 1613 aa32.36■■■□□ 2.77
SEMA3B-205ENST00000434030 STAC3Q96MF2 364 aa32.34■■■□□ 2.77
SEMA3B-205ENST00000434030 FMN2Q9NZ56 1722 aa32.31■■■□□ 2.76
SEMA3B-205ENST00000434030 ADGRB1O14514 1584 aa32.31■■■□□ 2.76
SEMA3B-205ENST00000434030 POTEAQ6S8J7 498 aa32.3■■■□□ 2.76
SEMA3B-205ENST00000434030 ESCO1Q5FWF5 840 aa32.29■■■□□ 2.76
SEMA3B-205ENST00000434030 RGPD8O14715 1765 aaPredicted RBP32.29■■■□□ 2.76
SEMA3B-205ENST00000434030 SOS2Q07890 1332 aaPredicted RBP32.27■■■□□ 2.76
SEMA3B-205ENST00000434030 DLC1Q96QB1 1528 aa32.27■■■□□ 2.76
SEMA3B-205ENST00000434030 NUTM2FA1L443 756 aa32.27■■■□□ 2.76
SEMA3B-205ENST00000434030 NUTM2BA6NNL0 878 aaPredicted RBP32.26■■■□□ 2.75
SEMA3B-205ENST00000434030 NUTM2EB1AL46 878 aaPredicted RBP32.26■■■□□ 2.75
SEMA3B-205ENST00000434030 MEX3CQ5U5Q3 659 aaKnown RBP32.26■■■□□ 2.75
SEMA3B-205ENST00000434030 NUTM2AQ8IVF1 878 aaPredicted RBP32.26■■■□□ 2.75
SEMA3B-205ENST00000434030 PNPLA6Q8IY17 1366 aa32.25■■■□□ 2.75
SEMA3B-205ENST00000434030 PRAM1Q96QH2 718 aa32.25■■■□□ 2.75
SEMA3B-205ENST00000434030 SAFB2Q14151 953 aaKnown RBP eCLIP32.22■■■□□ 2.75
SEMA3B-205ENST00000434030 TRAK1Q9UPV9 953 aa32.22■■■□□ 2.75
SEMA3B-205ENST00000434030 POGKQ9P215 609 aa32.21■■■□□ 2.75
SEMA3B-205ENST00000434030 NPHP3Q7Z494 1330 aa32.2■■■□□ 2.74
SEMA3B-205ENST00000434030 FOXO3O43524 673 aa32.18■■■□□ 2.74
SEMA3B-205ENST00000434030 PXDNQ92626 1479 aa32.16■■■□□ 2.74
SEMA3B-205ENST00000434030 KIF1AQ12756 1690 aa32.16■■■□□ 2.74
SEMA3B-205ENST00000434030 KIAA1210Q9ULL0 1709 aa32.15■■■□□ 2.74
SEMA3B-205ENST00000434030 ADGRB2O60241 1585 aa32.13■■■□□ 2.73
SEMA3B-205ENST00000434030 ZNF772Q68DY9 489 aaPredicted RBP32.13■■■□□ 2.73
SEMA3B-205ENST00000434030 ARHGEF28Q8N1W1 1705 aaKnown RBP32.13■■■□□ 2.73
SEMA3B-205ENST00000434030 COL22A1Q8NFW1 1626 aaPredicted RBP32.13■■■□□ 2.73
SEMA3B-205ENST00000434030 XPCQ01831 940 aaPredicted RBP32.12■■■□□ 2.73
SEMA3B-205ENST00000434030 USP32Q8NFA0 1604 aa32.09■■■□□ 2.73
SEMA3B-205ENST00000434030 HIRIP3Q9BW71 556 aaPredicted RBP32.07■■■□□ 2.72
SEMA3B-205ENST00000434030 PHF8Q9UPP1 1060 aa32.07■■■□□ 2.72
SEMA3B-205ENST00000434030 AFF2P51816 1311 aa32.06■■■□□ 2.72
SEMA3B-205ENST00000434030 MINK1Q8N4C8 1332 aaPredicted RBP32.06■■■□□ 2.72
SEMA3B-205ENST00000434030 C8orf37Q96NL8 207 aa32.06■■■□□ 2.72
SEMA3B-205ENST00000434030 SIN3AQ96ST3 1273 aa32.05■■■□□ 2.72
SEMA3B-205ENST00000434030 ADAMTS2O95450 1211 aa32.04■■■□□ 2.72
SEMA3B-205ENST00000434030 ANKARQ7Z5J8 1434 aa32.03■■■□□ 2.72
SEMA3B-205ENST00000434030 KRT28Q7Z3Y7 464 aa32.03■■■□□ 2.72
SEMA3B-205ENST00000434030 MARF1Q9Y4F3 1742 aaKnown RBP32.02■■■□□ 2.72
SEMA3B-205ENST00000434030 NBPF1Q3BBV0 1214 aa32.01■■■□□ 2.71
SEMA3B-205ENST00000434030 L3MBTL2Q969R5 705 aa32.01■■■□□ 2.71
SEMA3B-205ENST00000434030 SPATA31A3Q5VYP0 1347 aa32■■■□□ 2.71
SEMA3B-205ENST00000434030 WASLO00401 505 aaPredicted RBP31.99■■■□□ 2.71
SEMA3B-205ENST00000434030 NGLY1Q96IV0 654 aa31.99■■■□□ 2.71
SEMA3B-205ENST00000434030 TULP4Q9NRJ4 1543 aa31.97■■■□□ 2.71
SEMA3B-205ENST00000434030 NEUROD1Q13562 356 aa31.97■■■□□ 2.71
SEMA3B-205ENST00000434030 PMFBP1Q8TBY8 1022 aa31.97■■■□□ 2.71
SEMA3B-205ENST00000434030 PRR36Q9H6K5 1346 aa31.96■■■□□ 2.71
SEMA3B-205ENST00000434030 EIF3AQ14152 1382 aaKnown RBP31.95■■■□□ 2.71
SEMA3B-205ENST00000434030 RXRBP28702 533 aa31.95■■■□□ 2.71
SEMA3B-205ENST00000434030 PSME1Q06323 249 aa31.95■■■□□ 2.71
SEMA3B-205ENST00000434030 TRIM26Q12899 539 aaPredicted RBP31.95■■■□□ 2.71
SEMA3B-205ENST00000434030 QTRT2Q9H974 415 aaKnown RBP31.93■■■□□ 2.7
SEMA3B-205ENST00000434030 ITSN1Q15811 1721 aa31.92■■■□□ 2.7
SEMA3B-205ENST00000434030 TNS3Q68CZ2 1445 aa31.91■■■□□ 2.7
SEMA3B-205ENST00000434030 SBNO1A3KN83 1393 aa31.9■■■□□ 2.7
SEMA3B-205ENST00000434030 FNBP4Q8N3X1 1017 aaPredicted RBP31.89■■■□□ 2.7
SEMA3B-205ENST00000434030 TRPM1Q7Z4N2 1603 aa31.89■■■□□ 2.7
SEMA3B-205ENST00000434030 TRPM3Q9HCF6 1732 aaPredicted RBP31.89■■■□□ 2.69
SEMA3B-205ENST00000434030 USP21Q9UK80 565 aa31.87■■■□□ 2.69
SEMA3B-205ENST00000434030 CDK12Q9NYV4 1490 aaPredicted RBP31.85■■■□□ 2.69
SEMA3B-205ENST00000434030 CDK19Q9BWU1 502 aa31.85■■■□□ 2.69
SEMA3B-205ENST00000434030 ATP7BP35670 1465 aa31.84■■■□□ 2.69
SEMA3B-205ENST00000434030 RBM6P78332 1123 aaKnown RBP31.84■■■□□ 2.69
SEMA3B-205ENST00000434030 NUDT16Q96DE0 195 aaKnown RBP31.84■■■□□ 2.69
SEMA3B-205ENST00000434030 LMOD2Q6P5Q4 547 aa31.83■■■□□ 2.69
SEMA3B-205ENST00000434030 ABCA3Q99758 1704 aa31.83■■■□□ 2.69
SEMA3B-205ENST00000434030 ALS2Q96Q42 1657 aa31.82■■■□□ 2.68
SEMA3B-205ENST00000434030 QRICH2Q9H0J4 1663 aa31.82■■■□□ 2.68
SEMA3B-205ENST00000434030 ARHGEF10O15013 1369 aa31.81■■■□□ 2.68
SEMA3B-205ENST00000434030 GPRASP1Q5JY77 1395 aa31.81■■■□□ 2.68
SEMA3B-205ENST00000434030 NGDNQ8NEJ9 315 aaKnown RBP31.81■■■□□ 2.68
SEMA3B-205ENST00000434030 CENPJQ9HC77 1338 aaPredicted RBP31.8■■■□□ 2.68
SEMA3B-205ENST00000434030 CABLES1Q8TDN4 633 aa31.8■■■□□ 2.68
SEMA3B-205ENST00000434030 TRPC5Q9UL62 973 aaPredicted RBP31.8■■■□□ 2.68
SEMA3B-205ENST00000434030 TOPAZ1Q8N9V7 1692 aa31.8■■■□□ 2.68
SEMA3B-205ENST00000434030 BCL9LQ86UU0 1499 aa31.78■■■□□ 2.68
SEMA3B-205ENST00000434030 PLEKHG5O94827 1062 aa31.77■■■□□ 2.68
SEMA3B-205ENST00000434030 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.77■■■□□ 2.68
SEMA3B-205ENST00000434030 ATRNO75882 1429 aa31.76■■■□□ 2.68
SEMA3B-205ENST00000434030 HAP1P54257 671 aaPredicted RBP31.76■■■□□ 2.67
SEMA3B-205ENST00000434030 RGS12O14924 1447 aa31.75■■■□□ 2.67
SEMA3B-205ENST00000434030 CCDC61Q9Y6R9 512 aa31.74■■■□□ 2.67
SEMA3B-205ENST00000434030 NBPF8Q3BBV2 869 aa31.73■■■□□ 2.67
SEMA3B-205ENST00000434030 SLIT2O94813 1529 aa31.73■■■□□ 2.67
SEMA3B-205ENST00000434030 ROCK2O75116 1388 aaKnown RBP31.72■■■□□ 2.67
SEMA3B-205ENST00000434030 PAK3O75914 559 aaPredicted RBP31.7■■■□□ 2.67
SEMA3B-205ENST00000434030 PLCH1Q4KWH8 1693 aa31.7■■■□□ 2.66
SEMA3B-205ENST00000434030 CRYBG1Q9Y4K1 1723 aa31.69■■■□□ 2.66
SEMA3B-205ENST00000434030 PLEKHG3A1L390 1219 aa31.69■■■□□ 2.66
SEMA3B-205ENST00000434030 SRPK2P78362 688 aaKnown RBP31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms