RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 SSH1Q8WYL5 1049 aa11.55□□□□□ -0.56
HPS4-203ENST00000402105 ANTXR1Q9H6X2 564 aa11.55□□□□□ -0.56
HPS4-203ENST00000402105 CROCC2H7BZ55 1655 aa11.55□□□□□ -0.56
HPS4-203ENST00000402105 KANK1Q14678 1352 aa11.54□□□□□ -0.56
HPS4-203ENST00000402105 PRDM15P57071 1507 aaPredicted RBP11.54□□□□□ -0.56
HPS4-203ENST00000402105 E9PCH4 1651 aa11.54□□□□□ -0.56
HPS4-203ENST00000402105 TRIM27P14373 513 aa11.54□□□□□ -0.56
HPS4-203ENST00000402105 TMEM57Q8N5G2 664 aa11.54□□□□□ -0.56
HPS4-203ENST00000402105 SAMD9LQ8IVG5 1584 aa11.54□□□□□ -0.56
HPS4-203ENST00000402105 RIPK4P57078 832 aa11.53□□□□□ -0.56
HPS4-203ENST00000402105 ARID3AQ99856 593 aa11.53□□□□□ -0.56
HPS4-203ENST00000402105 TRAPPC8Q9Y2L5 1435 aa11.53□□□□□ -0.56
HPS4-203ENST00000402105 PIK3C2GO75747 1445 aa11.53□□□□□ -0.56
HPS4-203ENST00000402105 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
HPS4-203ENST00000402105 ADCY10Q96PN6 1610 aa11.52□□□□□ -0.56
HPS4-203ENST00000402105 UBE2Q2Q8WVN8 375 aa11.52□□□□□ -0.57
HPS4-203ENST00000402105 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.57
HPS4-203ENST00000402105 THUMPD2Q9BTF0 503 aaKnown RBP11.52□□□□□ -0.57
HPS4-203ENST00000402105 FOXD4L5Q5VV16 416 aaPredicted RBP11.51□□□□□ -0.57
HPS4-203ENST00000402105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.51□□□□□ -0.57
HPS4-203ENST00000402105 FOXD4L4Q8WXT5 416 aaPredicted RBP11.51□□□□□ -0.57
HPS4-203ENST00000402105 WDR63Q8IWG1 891 aa11.51□□□□□ -0.57
HPS4-203ENST00000402105 GRPEL1Q9HAV7 217 aa11.51□□□□□ -0.57
HPS4-203ENST00000402105 INSRP06213 1382 aa11.51□□□□□ -0.57
HPS4-203ENST00000402105 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
HPS4-203ENST00000402105 SCAPERQ9BY12 1400 aa11.5□□□□□ -0.57
HPS4-203ENST00000402105 HMOX1P09601 288 aa11.5□□□□□ -0.57
HPS4-203ENST00000402105 DDX19BQ9UMR2 479 aa11.5□□□□□ -0.57
HPS4-203ENST00000402105 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
HPS4-203ENST00000402105 ATF7IPQ6VMQ6 1270 aa11.5□□□□□ -0.57
HPS4-203ENST00000402105 HSP90AA2PQ14568 343 aaPredicted RBP11.49□□□□□ -0.57
HPS4-203ENST00000402105 NUP160Q12769 1436 aa11.49□□□□□ -0.57
HPS4-203ENST00000402105 ABCA8O94911 1581 aa11.49□□□□□ -0.57
HPS4-203ENST00000402105 TNPO1Q92973 898 aaKnown RBP11.49□□□□□ -0.57
HPS4-203ENST00000402105 MRE11P49959 708 aa11.48□□□□□ -0.57
HPS4-203ENST00000402105 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
HPS4-203ENST00000402105 TMPOP42166 694 aaKnown RBP11.48□□□□□ -0.57
HPS4-203ENST00000402105 ANP32BQ92688 251 aaKnown RBP11.48□□□□□ -0.57
HPS4-203ENST00000402105 DDX11L8A8MPP1 907 aa11.47□□□□□ -0.57
HPS4-203ENST00000402105 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
HPS4-203ENST00000402105 GBP4Q96PP9 640 aa11.47□□□□□ -0.57
HPS4-203ENST00000402105 GLIPR1L2Q4G1C9 344 aa11.47□□□□□ -0.57
HPS4-203ENST00000402105 DDX49Q9Y6V7 483 aaKnown RBP11.47□□□□□ -0.57
HPS4-203ENST00000402105 IPO8O15397 1037 aaKnown RBP11.46□□□□□ -0.57
HPS4-203ENST00000402105 UGGT1Q9NYU2 1555 aa11.46□□□□□ -0.57
HPS4-203ENST00000402105 ESPNB1AK53 854 aa11.46□□□□□ -0.58
HPS4-203ENST00000402105 FOXD4L6Q3SYB3 417 aaPredicted RBP11.46□□□□□ -0.58
HPS4-203ENST00000402105 FOXD4L3Q6VB84 417 aaPredicted RBP11.46□□□□□ -0.58
HPS4-203ENST00000402105 EIF2AK4Q9P2K8 1649 aaKnown RBP11.46□□□□□ -0.58
HPS4-203ENST00000402105 POLR3AO14802 1390 aaPredicted RBP11.46□□□□□ -0.58
HPS4-203ENST00000402105 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.58
HPS4-203ENST00000402105 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
HPS4-203ENST00000402105 CHD1LQ86WJ1 897 aa11.45□□□□□ -0.58
HPS4-203ENST00000402105 GAS2L3Q86XJ1 694 aa11.45□□□□□ -0.58
HPS4-203ENST00000402105 NOS1P29475 1434 aa11.45□□□□□ -0.58
HPS4-203ENST00000402105 NINLQ9Y2I6 1382 aa11.45□□□□□ -0.58
HPS4-203ENST00000402105 SSFA2P28290 1259 aa11.45□□□□□ -0.58
HPS4-203ENST00000402105 NOL8Q76FK4 1167 aaKnown RBP11.45□□□□□ -0.58
HPS4-203ENST00000402105 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
HPS4-203ENST00000402105 CD2BP2O95400 341 aaKnown RBP11.44□□□□□ -0.58
HPS4-203ENST00000402105 EVC2Q86UK5 1308 aa11.44□□□□□ -0.58
HPS4-203ENST00000402105 GOLGA6L22H0YM25 854 aa11.44□□□□□ -0.58
HPS4-203ENST00000402105 SOX12O15370 315 aa11.44□□□□□ -0.58
HPS4-203ENST00000402105 DUOX2Q9NRD8 1548 aa11.44□□□□□ -0.58
HPS4-203ENST00000402105 ERVK-7P63135 1459 aa11.44□□□□□ -0.58
HPS4-203ENST00000402105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.44□□□□□ -0.58
HPS4-203ENST00000402105 MCTP1Q6DN14 999 aa11.43□□□□□ -0.58
HPS4-203ENST00000402105 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
HPS4-203ENST00000402105 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
HPS4-203ENST00000402105 ATP10AO60312 1499 aa11.43□□□□□ -0.58
HPS4-203ENST00000402105 DIAPH1O60610 1272 aaKnown RBP11.43□□□□□ -0.58
HPS4-203ENST00000402105 CDC42BPBQ9Y5S2 1711 aa11.42□□□□□ -0.58
HPS4-203ENST00000402105 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
HPS4-203ENST00000402105 RBM10P98175 930 aaKnown RBP11.42□□□□□ -0.58
HPS4-203ENST00000402105 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
HPS4-203ENST00000402105 NPC1L1Q9UHC9 1359 aa11.42□□□□□ -0.58
HPS4-203ENST00000402105 FSD2A1L4K1 749 aa11.42□□□□□ -0.58
HPS4-203ENST00000402105 ERBB4Q15303 1308 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 MAST1Q9Y2H9 1570 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 MPNDQ8N594 471 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 CLCN1P35523 988 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 AAMPQ13685 434 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 CAVIN1Q6NZI2 390 aaKnown RBP11.41□□□□□ -0.58
HPS4-203ENST00000402105 CHAMP1Q96JM3 812 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 ZBTB40Q9NUA8 1239 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 MYO5CQ9NQX4 1742 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 ATAD2Q6PL18 1390 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 DCTN1Q14203 1278 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 TSPYL6Q8N831 410 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 GAS2L2Q8NHY3 880 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 ABCC2Q92887 1545 aa11.41□□□□□ -0.58
HPS4-203ENST00000402105 PLCH2O75038 1416 aa11.4□□□□□ -0.58
HPS4-203ENST00000402105 NASPP49321 788 aaPredicted RBP11.4□□□□□ -0.58
HPS4-203ENST00000402105 HDAC1Q13547 482 aaPredicted RBP11.4□□□□□ -0.58
HPS4-203ENST00000402105 TBC1D9Q6ZT07 1266 aa11.4□□□□□ -0.58
HPS4-203ENST00000402105 C16orf71Q8IYS4 520 aaPredicted RBP11.4□□□□□ -0.58
HPS4-203ENST00000402105 MSNP26038 577 aaKnown RBP11.4□□□□□ -0.58
HPS4-203ENST00000402105 SYNMO15061 1565 aa11.4□□□□□ -0.59
HPS4-203ENST00000402105 NUCB1Q02818 461 aa11.39□□□□□ -0.59
HPS4-203ENST00000402105 NLRP1Q9C000 1473 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 269 ms