RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
PTPRN2-202ENST00000389416 RBM19Q9Y4C8 960 aaKnown RBP16.43■□□□□ 0.22
PTPRN2-202ENST00000389416 MCCP23508 829 aa16.42■□□□□ 0.22
PTPRN2-202ENST00000389416 DZIP1LQ8IYY4 767 aaKnown RBP16.42■□□□□ 0.22
PTPRN2-202ENST00000389416 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
PTPRN2-202ENST00000389416 TEX14Q8IWB6 1497 aa16.42■□□□□ 0.22
PTPRN2-202ENST00000389416 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
PTPRN2-202ENST00000389416 NSD3Q9BZ95 1437 aa16.41■□□□□ 0.22
PTPRN2-202ENST00000389416 ZC3H6P61129 1189 aaKnown RBP16.41■□□□□ 0.22
PTPRN2-202ENST00000389416 CEP170Q5SW79 1584 aa16.41■□□□□ 0.22
PTPRN2-202ENST00000389416 NEXNQ0ZGT2 675 aa16.4■□□□□ 0.22
PTPRN2-202ENST00000389416 HSCBQ8IWL3 235 aa16.4■□□□□ 0.22
PTPRN2-202ENST00000389416 C9orf78Q9NZ63 289 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-202ENST00000389416 FOXO3O43524 673 aa16.4■□□□□ 0.22
PTPRN2-202ENST00000389416 MFAP1P55081 439 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-202ENST00000389416 ANKRD45Q5TZF3 282 aa16.4■□□□□ 0.22
PTPRN2-202ENST00000389416 API5Q9BZZ5 524 aaKnown RBP16.39■□□□□ 0.21
PTPRN2-202ENST00000389416 PRDM11Q9NQV5 511 aa16.39■□□□□ 0.21
PTPRN2-202ENST00000389416 TNRQ92752 1358 aa16.38■□□□□ 0.21
PTPRN2-202ENST00000389416 NUTM2BA6NNL0 878 aaPredicted RBP16.38■□□□□ 0.21
PTPRN2-202ENST00000389416 NUTM2EB1AL46 878 aaPredicted RBP16.38■□□□□ 0.21
PTPRN2-202ENST00000389416 NUTM2AQ8IVF1 878 aaPredicted RBP16.38■□□□□ 0.21
PTPRN2-202ENST00000389416 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
PTPRN2-202ENST00000389416 DUOX2Q9NRD8 1548 aa16.38■□□□□ 0.21
PTPRN2-202ENST00000389416 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
PTPRN2-202ENST00000389416 PIP4K2BP78356 416 aa16.38■□□□□ 0.21
PTPRN2-202ENST00000389416 ITSN2Q9NZM3 1697 aa16.38■□□□□ 0.21
PTPRN2-202ENST00000389416 WASLO00401 505 aaPredicted RBP16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 TSR2Q969E8 191 aaKnown RBP16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 DDX19BQ9UMR2 479 aa16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 NME9Q86XW9 330 aa16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 ABCC10Q5T3U5 1492 aa16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 EXOSC9Q06265 439 aaKnown RBP16.37■□□□□ 0.21
PTPRN2-202ENST00000389416 MSH5O43196 834 aa16.36■□□□□ 0.21
PTPRN2-202ENST00000389416 PLEKHO1Q53GL0 409 aaPredicted RBP16.36■□□□□ 0.21
PTPRN2-202ENST00000389416 GPATCH3Q96I76 525 aa16.36■□□□□ 0.21
PTPRN2-202ENST00000389416 TOM1L2Q6ZVM7 507 aa16.36■□□□□ 0.21
PTPRN2-202ENST00000389416 TCOF1Q13428 1488 aaKnown RBP16.35■□□□□ 0.21
PTPRN2-202ENST00000389416 CENPQQ7L2Z9 268 aaPredicted RBP16.35■□□□□ 0.21
PTPRN2-202ENST00000389416 KIF16BQ96L93 1317 aa16.35■□□□□ 0.21
PTPRN2-202ENST00000389416 DDX58O95786 925 aaKnown RBP16.34■□□□□ 0.21
PTPRN2-202ENST00000389416 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
PTPRN2-202ENST00000389416 PHF8Q9UPP1 1060 aa16.34■□□□□ 0.21
PTPRN2-202ENST00000389416 ZNF530Q6P9A1 599 aaPredicted RBP16.33■□□□□ 0.2
PTPRN2-202ENST00000389416 TATP17735 454 aaPredicted RBP16.33■□□□□ 0.2
PTPRN2-202ENST00000389416 FRAT2O75474 233 aaPredicted RBP16.33■□□□□ 0.2
PTPRN2-202ENST00000389416 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
PTPRN2-202ENST00000389416 SCAF11Q99590 1463 aaKnown RBP16.32■□□□□ 0.2
PTPRN2-202ENST00000389416 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
PTPRN2-202ENST00000389416 UHRF1BP1LA0JNW5 1464 aa16.3■□□□□ 0.2
PTPRN2-202ENST00000389416 RILPL2Q969X0 211 aa16.3■□□□□ 0.2
PTPRN2-202ENST00000389416 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
PTPRN2-202ENST00000389416 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
PTPRN2-202ENST00000389416 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
PTPRN2-202ENST00000389416 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
PTPRN2-202ENST00000389416 MAPKBP1O60336 1514 aa16.3■□□□□ 0.2
PTPRN2-202ENST00000389416 SLKQ9H2G2 1235 aaPredicted RBP16.3■□□□□ 0.2
PTPRN2-202ENST00000389416 DISP3Q9P2K9 1392 aa16.3■□□□□ 0.2
PTPRN2-202ENST00000389416 SMG6Q86US8 1419 aaKnown RBP16.29■□□□□ 0.2
PTPRN2-202ENST00000389416 ZRSR1Q15695 479 aaKnown RBP16.29■□□□□ 0.2
PTPRN2-202ENST00000389416 ANP32EQ9BTT0 268 aa16.28■□□□□ 0.2
PTPRN2-202ENST00000389416 SAMD9Q5K651 1589 aa16.28■□□□□ 0.2
PTPRN2-202ENST00000389416 BCAR3O75815 825 aa16.28■□□□□ 0.2
PTPRN2-202ENST00000389416 FCHSD2O94868 740 aa16.27■□□□□ 0.2
PTPRN2-202ENST00000389416 TSHZ2Q9NRE2 1034 aa16.27■□□□□ 0.2
PTPRN2-202ENST00000389416 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
PTPRN2-202ENST00000389416 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.2
PTPRN2-202ENST00000389416 G3V3G9 751 aa16.27■□□□□ 0.19
PTPRN2-202ENST00000389416 DCAF8Q5TAQ9 597 aa16.27■□□□□ 0.19
PTPRN2-202ENST00000389416 FBLN1P23142 703 aa16.26■□□□□ 0.19
PTPRN2-202ENST00000389416 KCNH5Q8NCM2 988 aa16.26■□□□□ 0.19
PTPRN2-202ENST00000389416 HSPA2P54652 639 aa16.25■□□□□ 0.19
PTPRN2-202ENST00000389416 NOL8Q76FK4 1167 aaKnown RBP16.25■□□□□ 0.19
PTPRN2-202ENST00000389416 ZMYM3Q14202 1370 aa16.25■□□□□ 0.19
PTPRN2-202ENST00000389416 HDGFL1Q5TGJ6 251 aa16.25■□□□□ 0.19
PTPRN2-202ENST00000389416 CCDC30Q5VVM6 783 aa16.25■□□□□ 0.19
PTPRN2-202ENST00000389416 LNPKQ9C0E8 428 aa16.25■□□□□ 0.19
PTPRN2-202ENST00000389416 TMPOP42166 694 aaKnown RBP16.25■□□□□ 0.19
PTPRN2-202ENST00000389416 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
PTPRN2-202ENST00000389416 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
PTPRN2-202ENST00000389416 ACEP12821 1306 aa16.24■□□□□ 0.19
PTPRN2-202ENST00000389416 SHANK2Q9UPX8 1470 aa16.24■□□□□ 0.19
PTPRN2-202ENST00000389416 ZNF428Q96B54 188 aa16.24■□□□□ 0.19
PTPRN2-202ENST00000389416 PDE4AP27815 886 aa16.23■□□□□ 0.19
PTPRN2-202ENST00000389416 MAGI3Q5TCQ9 1506 aa16.23■□□□□ 0.19
PTPRN2-202ENST00000389416 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
PTPRN2-202ENST00000389416 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
PTPRN2-202ENST00000389416 RIMS2Q9UQ26 1411 aa16.23■□□□□ 0.19
PTPRN2-202ENST00000389416 CABP4P57796 275 aa16.22■□□□□ 0.19
PTPRN2-202ENST00000389416 WDR63Q8IWG1 891 aa16.22■□□□□ 0.19
PTPRN2-202ENST00000389416 UBTFL1P0CB47 393 aaPredicted RBP16.22■□□□□ 0.19
PTPRN2-202ENST00000389416 WWC1Q8IX03 1113 aa16.22■□□□□ 0.19
PTPRN2-202ENST00000389416 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
PTPRN2-202ENST00000389416 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTPRN2-202ENST00000389416 NFE2L2Q16236 605 aa16.22■□□□□ 0.19
PTPRN2-202ENST00000389416 FAM177BA6PVY3 158 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms