RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 FOXD4L5Q5VV16 416 aaPredicted RBP15.19■□□□□ 0.02
SF1-204ENST00000377390 FOXD4L4Q8WXT5 416 aaPredicted RBP15.19■□□□□ 0.02
SF1-204ENST00000377390 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
SF1-204ENST00000377390 GCC2Q8IWJ2 1684 aa15.19■□□□□ 0.02
SF1-204ENST00000377390 ANTXR1Q9H6X2 564 aa15.19■□□□□ 0.02
SF1-204ENST00000377390 ERBB4Q15303 1308 aa15.19■□□□□ 0.02
SF1-204ENST00000377390 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
SF1-204ENST00000377390 KANK1Q14678 1352 aa15.18■□□□□ 0.02
SF1-204ENST00000377390 ELL2O00472 640 aaPredicted RBP15.18■□□□□ 0.02
SF1-204ENST00000377390 GGNBP2Q9H3C7 697 aa15.18■□□□□ 0.02
SF1-204ENST00000377390 TSR2Q969E8 191 aaKnown RBP15.17■□□□□ 0.02
SF1-204ENST00000377390 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
SF1-204ENST00000377390 KDM5CP41229 1560 aa15.17■□□□□ 0.02
SF1-204ENST00000377390 NASPP49321 788 aaPredicted RBP15.16■□□□□ 0.02
SF1-204ENST00000377390 RARSP54136 660 aaKnown RBP15.16■□□□□ 0.02
SF1-204ENST00000377390 PTMAP06454 111 aaKnown RBP15.16■□□□□ 0.02
SF1-204ENST00000377390 NKTRP30414 1462 aaKnown RBP15.16■□□□□ 0.02
SF1-204ENST00000377390 TPM2P07951 284 aa15.16■□□□□ 0.02
SF1-204ENST00000377390 DZIP1LQ8IYY4 767 aaKnown RBP15.16■□□□□ 0.02
SF1-204ENST00000377390 TNPO1Q92973 898 aaKnown RBP15.16■□□□□ 0.02
SF1-204ENST00000377390 ZKSCAN2Q63HK3 967 aa15.15■□□□□ 0.02
SF1-204ENST00000377390 APBB1O00213 710 aa15.15■□□□□ 0.02
SF1-204ENST00000377390 MPNDQ8N594 471 aa15.15■□□□□ 0.02
SF1-204ENST00000377390 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
SF1-204ENST00000377390 EIF3AQ14152 1382 aaKnown RBP15.15■□□□□ 0.02
SF1-204ENST00000377390 ANKRD45Q5TZF3 282 aa15.14■□□□□ 0.01
SF1-204ENST00000377390 NUTM2GQ5VZR2 741 aa15.14■□□□□ 0.01
SF1-204ENST00000377390 CFAP53Q96M91 514 aa15.14■□□□□ 0.01
SF1-204ENST00000377390 RSPH4AQ5TD94 716 aa15.13■□□□□ 0.01
SF1-204ENST00000377390 GAS2L3Q86XJ1 694 aa15.13■□□□□ 0.01
SF1-204ENST00000377390 BLMP54132 1417 aaPredicted RBP15.13■□□□□ 0.01
SF1-204ENST00000377390 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
SF1-204ENST00000377390 CALD1Q05682 793 aaKnown RBP15.12■□□□□ 0.01
SF1-204ENST00000377390 FOXD4L6Q3SYB3 417 aaPredicted RBP15.12■□□□□ 0.01
SF1-204ENST00000377390 FOXD4L3Q6VB84 417 aaPredicted RBP15.12■□□□□ 0.01
SF1-204ENST00000377390 FSD2A1L4K1 749 aa15.12■□□□□ 0.01
SF1-204ENST00000377390 XPCQ01831 940 aaPredicted RBP15.12■□□□□ 0.01
SF1-204ENST00000377390 MCTP1Q6DN14 999 aa15.11■□□□□ 0.01
SF1-204ENST00000377390 WAPLQ7Z5K2 1190 aa15.11■□□□□ 0.01
SF1-204ENST00000377390 ZMYM4Q5VZL5 1548 aa15.11■□□□□ 0.01
SF1-204ENST00000377390 CAVIN1Q6NZI2 390 aaKnown RBP15.11■□□□□ 0.01
SF1-204ENST00000377390 UHRF1BP1Q6BDS2 1440 aa15.11■□□□□ 0.01
SF1-204ENST00000377390 PLCB2Q00722 1185 aa15.1■□□□□ 0.01
SF1-204ENST00000377390 RBM42Q9BTD8 480 aaKnown RBP15.1■□□□□ 0.01
SF1-204ENST00000377390 NUP160Q12769 1436 aa15.1■□□□□ 0.01
SF1-204ENST00000377390 MTHFSP49914 203 aa15.1■□□□□ 0.01
SF1-204ENST00000377390 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
SF1-204ENST00000377390 CCDC141Q6ZP82 1450 aa15.09■□□□□ 0.01
SF1-204ENST00000377390 ZNF521Q96K83 1311 aa15.09■□□□□ 0.01
SF1-204ENST00000377390 SSFA2P28290 1259 aa15.09■□□□□ 0.01
SF1-204ENST00000377390 RNF214Q8ND24 703 aa15.09■□□□□ 0.01
SF1-204ENST00000377390 C1orf115Q9H7X2 142 aa15.09■□□□□ 0.01
SF1-204ENST00000377390 MBD5Q9P267 1494 aa15.09■□□□□ 0.01
SF1-204ENST00000377390 EXOSC9Q06265 439 aaKnown RBP15.09■□□□□ 0.01
SF1-204ENST00000377390 MVPQ14764 893 aaKnown RBP15.09■□□□□ 0.01
SF1-204ENST00000377390 NCKAP5LQ9HCH0 1330 aa15.09■□□□□ 0.01
SF1-204ENST00000377390 PRAG1Q86YV5 1406 aa15.08■□□□□ 0.01
SF1-204ENST00000377390 UQCRHLA0A096LP55 91 aa15.08■□□□□ 0.01
SF1-204ENST00000377390 UQCRHP07919 91 aa15.08■□□□□ 0.01
SF1-204ENST00000377390 SKOR2Q2VWA4 1001 aaPredicted RBP15.08■□□□□ 0
SF1-204ENST00000377390 SLC26A8Q96RN1 970 aa15.08■□□□□ 0
SF1-204ENST00000377390 IDI1Q13907 227 aa15.07■□□□□ 0
SF1-204ENST00000377390 HMOX1P09601 288 aa15.07■□□□□ 0
SF1-204ENST00000377390 AAMPQ13685 434 aa15.07■□□□□ 0
SF1-204ENST00000377390 TXNDC2Q86VQ3 553 aa15.07■□□□□ 0
SF1-204ENST00000377390 LTV1Q96GA3 475 aaPredicted RBP15.07■□□□□ 0
SF1-204ENST00000377390 NOL8Q76FK4 1167 aaKnown RBP15.06■□□□□ 0
SF1-204ENST00000377390 PDE4CQ08493 712 aa15.06■□□□□ 0
SF1-204ENST00000377390 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.05■□□□□ 0
SF1-204ENST00000377390 ZSCAN30Q86W11 494 aa15.05■□□□□ 0
SF1-204ENST00000377390 DNMT1P26358 1616 aaKnown RBP15.05■□□□□ -0
SF1-204ENST00000377390 PRAM1Q96QH2 718 aa15.05■□□□□ -0
SF1-204ENST00000377390 NOB1Q9ULX3 412 aaKnown RBP15.05■□□□□ -0
SF1-204ENST00000377390 BBXQ8WY36 941 aaPredicted RBP15.04■□□□□ -0
SF1-204ENST00000377390 DDX19BQ9UMR2 479 aa15.04■□□□□ -0
SF1-204ENST00000377390 CCDC173Q0VFZ6 552 aa15.04■□□□□ -0
SF1-204ENST00000377390 TRMT2AQ8IZ69 625 aaKnown RBP15.04■□□□□ -0
SF1-204ENST00000377390 IGSF3O75054 1194 aa15.03■□□□□ -0
SF1-204ENST00000377390 FANCAO15360 1455 aa15.03■□□□□ -0
SF1-204ENST00000377390 PRPF40AO75400 957 aaKnown RBP15.02■□□□□ -0
SF1-204ENST00000377390 TMEM57Q8N5G2 664 aa15.02■□□□□ -0
SF1-204ENST00000377390 ADGRL1O94910 1474 aa15.02■□□□□ -0
SF1-204ENST00000377390 CARD14Q9BXL6 1004 aa15.02■□□□□ -0
SF1-204ENST00000377390 BCL11BQ9C0K0 894 aaPredicted RBP15.02■□□□□ -0
SF1-204ENST00000377390 ASXL2Q76L83 1435 aa15.02□□□□□ -0.01
SF1-204ENST00000377390 CBX1P83916 185 aa15.02□□□□□ -0.01
SF1-204ENST00000377390 SSH1Q8WYL5 1049 aa15.02□□□□□ -0.01
SF1-204ENST00000377390 CD109Q6YHK3 1445 aa15.02□□□□□ -0.01
SF1-204ENST00000377390 TRIM27P14373 513 aa15.01□□□□□ -0.01
SF1-204ENST00000377390 COL17A1Q9UMD9 1497 aaPredicted RBP15.01□□□□□ -0.01
SF1-204ENST00000377390 MAGI2Q86UL8 1455 aa15□□□□□ -0.01
SF1-204ENST00000377390 FAM177BA6PVY3 158 aa15□□□□□ -0.01
SF1-204ENST00000377390 K7ELQ4 463 aaPredicted RBP15□□□□□ -0.01
SF1-204ENST00000377390 IPO8O15397 1037 aaKnown RBP15□□□□□ -0.01
SF1-204ENST00000377390 THUMPD2Q9BTF0 503 aaKnown RBP15□□□□□ -0.01
SF1-204ENST00000377390 FGD1P98174 961 aa14.99□□□□□ -0.01
SF1-204ENST00000377390 TSC1Q92574 1164 aa14.99□□□□□ -0.01
SF1-204ENST00000377390 RBM27Q9P2N5 1060 aaKnown RBP14.99□□□□□ -0.01
SF1-204ENST00000377390 UGGT1Q9NYU2 1555 aa14.99□□□□□ -0.01
SF1-204ENST00000377390 ARHGEF12Q9NZN5 1544 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms