RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 ITSN2Q9NZM3 1697 aa13.86□□□□□ -0.19
SEMA4D-201ENST00000339861 CABP1Q9NZU7 370 aa13.86□□□□□ -0.19
SEMA4D-201ENST00000339861 MVPQ14764 893 aaKnown RBP13.86□□□□□ -0.19
SEMA4D-201ENST00000339861 LMOD2Q6P5Q4 547 aa13.86□□□□□ -0.19
SEMA4D-201ENST00000339861 NGEFQ8N5V2 710 aa13.86□□□□□ -0.19
SEMA4D-201ENST00000339861 PLCB2Q00722 1185 aa13.85□□□□□ -0.19
SEMA4D-201ENST00000339861 SSH1Q8WYL5 1049 aa13.85□□□□□ -0.19
SEMA4D-201ENST00000339861 CYB5RLQ6IPT4 315 aa13.85□□□□□ -0.19
SEMA4D-201ENST00000339861 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
SEMA4D-201ENST00000339861 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
SEMA4D-201ENST00000339861 TMEM57Q8N5G2 664 aa13.84□□□□□ -0.19
SEMA4D-201ENST00000339861 LTV1Q96GA3 475 aaPredicted RBP13.84□□□□□ -0.19
SEMA4D-201ENST00000339861 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
SEMA4D-201ENST00000339861 SCAF11Q99590 1463 aaKnown RBP13.84□□□□□ -0.19
SEMA4D-201ENST00000339861 ARID3AQ99856 593 aa13.84□□□□□ -0.19
SEMA4D-201ENST00000339861 CHMP4BQ9H444 224 aaKnown RBP13.84□□□□□ -0.19
SEMA4D-201ENST00000339861 COL17A1Q9UMD9 1497 aaPredicted RBP13.83□□□□□ -0.2
SEMA4D-201ENST00000339861 CHMP5Q9NZZ3 219 aa13.83□□□□□ -0.2
SEMA4D-201ENST00000339861 KDM5CP41229 1560 aa13.83□□□□□ -0.2
SEMA4D-201ENST00000339861 TMPOP42166 694 aaKnown RBP13.83□□□□□ -0.2
SEMA4D-201ENST00000339861 ATF7IPQ6VMQ6 1270 aa13.83□□□□□ -0.2
SEMA4D-201ENST00000339861 RTF1Q92541 710 aaKnown RBP13.82□□□□□ -0.2
SEMA4D-201ENST00000339861 PTMAP06454 111 aaKnown RBP13.82□□□□□ -0.2
SEMA4D-201ENST00000339861 WDR63Q8IWG1 891 aa13.82□□□□□ -0.2
SEMA4D-201ENST00000339861 ARHGEF12Q9NZN5 1544 aa13.82□□□□□ -0.2
SEMA4D-201ENST00000339861 NOS1P29475 1434 aa13.82□□□□□ -0.2
SEMA4D-201ENST00000339861 TBC1D2Q9BYX2 928 aa13.81□□□□□ -0.2
SEMA4D-201ENST00000339861 TRAK2O60296 914 aa13.8□□□□□ -0.2
SEMA4D-201ENST00000339861 TRIM27P14373 513 aa13.8□□□□□ -0.2
SEMA4D-201ENST00000339861 KDM2BQ8NHM5 1336 aa13.8□□□□□ -0.2
SEMA4D-201ENST00000339861 TRIM6-TRIM34B2RNG4 842 aa13.8□□□□□ -0.2
SEMA4D-201ENST00000339861 DCTN1Q14203 1278 aa13.8□□□□□ -0.2
SEMA4D-201ENST00000339861 CEP170Q5SW79 1584 aa13.8□□□□□ -0.2
SEMA4D-201ENST00000339861 CALD1Q05682 793 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-201ENST00000339861 COG3Q96JB2 828 aa13.8□□□□□ -0.2
SEMA4D-201ENST00000339861 DDX49Q9Y6V7 483 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-201ENST00000339861 WAPLQ7Z5K2 1190 aa13.79□□□□□ -0.2
SEMA4D-201ENST00000339861 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
SEMA4D-201ENST00000339861 RRS1Q15050 365 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-201ENST00000339861 KIF16BQ96L93 1317 aa13.79□□□□□ -0.2
SEMA4D-201ENST00000339861 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-201ENST00000339861 GPRASP1Q5JY77 1395 aa13.78□□□□□ -0.2
SEMA4D-201ENST00000339861 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
SEMA4D-201ENST00000339861 MAGI2Q86UL8 1455 aa13.78□□□□□ -0.2
SEMA4D-201ENST00000339861 MBD5Q9P267 1494 aa13.77□□□□□ -0.2
SEMA4D-201ENST00000339861 TXNDC2Q86VQ3 553 aa13.77□□□□□ -0.21
SEMA4D-201ENST00000339861 ASXL1Q8IXJ9 1541 aa13.77□□□□□ -0.21
SEMA4D-201ENST00000339861 IDI1Q13907 227 aa13.77□□□□□ -0.21
SEMA4D-201ENST00000339861 DNTTIP2Q5QJE6 756 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-201ENST00000339861 RILPL2Q969X0 211 aa13.76□□□□□ -0.21
SEMA4D-201ENST00000339861 SHANK2Q9UPX8 1470 aa13.76□□□□□ -0.21
SEMA4D-201ENST00000339861 FBXO31Q5XUX0 539 aaPredicted RBP13.76□□□□□ -0.21
SEMA4D-201ENST00000339861 DDX11L8A8MPP1 907 aa13.76□□□□□ -0.21
SEMA4D-201ENST00000339861 NUTM2GQ5VZR2 741 aa13.75□□□□□ -0.21
SEMA4D-201ENST00000339861 MCM4P33991 863 aa13.75□□□□□ -0.21
SEMA4D-201ENST00000339861 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
SEMA4D-201ENST00000339861 ABCC10Q5T3U5 1492 aa13.75□□□□□ -0.21
SEMA4D-201ENST00000339861 NUP160Q12769 1436 aa13.75□□□□□ -0.21
SEMA4D-201ENST00000339861 GLIPR1L2Q4G1C9 344 aa13.74□□□□□ -0.21
SEMA4D-201ENST00000339861 PLCH2O75038 1416 aa13.74□□□□□ -0.21
SEMA4D-201ENST00000339861 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
SEMA4D-201ENST00000339861 ADGRL1O94910 1474 aa13.74□□□□□ -0.21
SEMA4D-201ENST00000339861 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
SEMA4D-201ENST00000339861 MSNP26038 577 aaKnown RBP13.74□□□□□ -0.21
SEMA4D-201ENST00000339861 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
SEMA4D-201ENST00000339861 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
SEMA4D-201ENST00000339861 ZNF428Q96B54 188 aa13.74□□□□□ -0.21
SEMA4D-201ENST00000339861 AMPHP49418 695 aa13.73□□□□□ -0.21
SEMA4D-201ENST00000339861 CHD1LQ86WJ1 897 aa13.73□□□□□ -0.21
SEMA4D-201ENST00000339861 BLMP54132 1417 aaPredicted RBP13.73□□□□□ -0.21
SEMA4D-201ENST00000339861 GNAI1P63096 354 aa13.73□□□□□ -0.21
SEMA4D-201ENST00000339861 C14orf93Q9H972 538 aaKnown RBP13.73□□□□□ -0.21
SEMA4D-201ENST00000339861 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
SEMA4D-201ENST00000339861 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
SEMA4D-201ENST00000339861 MCTP1Q6DN14 999 aa13.72□□□□□ -0.21
SEMA4D-201ENST00000339861 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
SEMA4D-201ENST00000339861 FANCAO15360 1455 aa13.72□□□□□ -0.21
SEMA4D-201ENST00000339861 FAM83GA6ND36 823 aa13.72□□□□□ -0.21
SEMA4D-201ENST00000339861 KCNJ4P48050 445 aa13.72□□□□□ -0.21
SEMA4D-201ENST00000339861 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
SEMA4D-201ENST00000339861 TBC1D32Q96NH3 1257 aa13.72□□□□□ -0.21
SEMA4D-201ENST00000339861 ZMYM4Q5VZL5 1548 aa13.71□□□□□ -0.21
SEMA4D-201ENST00000339861 DUOX2Q9NRD8 1548 aa13.71□□□□□ -0.21
SEMA4D-201ENST00000339861 SULT6B1Q6IMI4 303 aa13.71□□□□□ -0.21
SEMA4D-201ENST00000339861 NME9Q86XW9 330 aa13.7□□□□□ -0.22
SEMA4D-201ENST00000339861 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
SEMA4D-201ENST00000339861 ADGBQ8N7X0 1667 aa13.7□□□□□ -0.22
SEMA4D-201ENST00000339861 FAM69CQ0P6D2 419 aa13.7□□□□□ -0.22
SEMA4D-201ENST00000339861 AAMPQ13685 434 aa13.7□□□□□ -0.22
SEMA4D-201ENST00000339861 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
SEMA4D-201ENST00000339861 PANK2Q9BZ23 570 aa13.69□□□□□ -0.22
SEMA4D-201ENST00000339861 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
SEMA4D-201ENST00000339861 FYB1O15117 783 aa13.69□□□□□ -0.22
SEMA4D-201ENST00000339861 ST18O60284 1047 aa13.69□□□□□ -0.22
SEMA4D-201ENST00000339861 HMMRO75330 724 aa13.68□□□□□ -0.22
SEMA4D-201ENST00000339861 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
SEMA4D-201ENST00000339861 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
SEMA4D-201ENST00000339861 PIK3C2GO75747 1445 aa13.68□□□□□ -0.22
SEMA4D-201ENST00000339861 NINLQ9Y2I6 1382 aa13.68□□□□□ -0.22
SEMA4D-201ENST00000339861 MCCP23508 829 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms