RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FSD2A1L4K1 749 aa16.13■□□□□ 0.17
TRIM35-201ENST00000305364 ZNF521Q96K83 1311 aa16.13■□□□□ 0.17
TRIM35-201ENST00000305364 K7ELQ4 463 aaPredicted RBP16.13■□□□□ 0.17
TRIM35-201ENST00000305364 NOB1Q9ULX3 412 aaKnown RBP16.12■□□□□ 0.17
TRIM35-201ENST00000305364 SLC12A5Q9H2X9 1139 aa16.12■□□□□ 0.17
TRIM35-201ENST00000305364 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
TRIM35-201ENST00000305364 LRRIQ1Q96JM4 1722 aa16.12■□□□□ 0.17
TRIM35-201ENST00000305364 KANK1Q14678 1352 aa16.12■□□□□ 0.17
TRIM35-201ENST00000305364 SSFA2P28290 1259 aa16.11■□□□□ 0.17
TRIM35-201ENST00000305364 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
TRIM35-201ENST00000305364 RNF214Q8ND24 703 aa16.11■□□□□ 0.17
TRIM35-201ENST00000305364 KIF3BO15066 747 aa16.11■□□□□ 0.17
TRIM35-201ENST00000305364 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
TRIM35-201ENST00000305364 EFCAB2Q5VUJ9 269 aa16.11■□□□□ 0.17
TRIM35-201ENST00000305364 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
TRIM35-201ENST00000305364 FOXD4L6Q3SYB3 417 aaPredicted RBP16.11■□□□□ 0.17
TRIM35-201ENST00000305364 FOXD4L3Q6VB84 417 aaPredicted RBP16.11■□□□□ 0.17
TRIM35-201ENST00000305364 MAP7D2Q96T17 732 aa16.11■□□□□ 0.17
TRIM35-201ENST00000305364 NUCB2P80303 420 aa16.1■□□□□ 0.17
TRIM35-201ENST00000305364 NOL8Q76FK4 1167 aaKnown RBP16.1■□□□□ 0.17
TRIM35-201ENST00000305364 ST18O60284 1047 aa16.1■□□□□ 0.17
TRIM35-201ENST00000305364 C1orf115Q9H7X2 142 aa16.1■□□□□ 0.17
TRIM35-201ENST00000305364 UQCRHLA0A096LP55 91 aa16.09■□□□□ 0.17
TRIM35-201ENST00000305364 PRPF40AO75400 957 aaKnown RBP16.09■□□□□ 0.17
TRIM35-201ENST00000305364 UQCRHP07919 91 aa16.09■□□□□ 0.17
TRIM35-201ENST00000305364 RIPK4P57078 832 aa16.09■□□□□ 0.17
TRIM35-201ENST00000305364 XPCQ01831 940 aaPredicted RBP16.09■□□□□ 0.17
TRIM35-201ENST00000305364 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
TRIM35-201ENST00000305364 TMEM57Q8N5G2 664 aa16.09■□□□□ 0.17
TRIM35-201ENST00000305364 CHD1LQ86WJ1 897 aa16.08■□□□□ 0.17
TRIM35-201ENST00000305364 TRMT2AQ8IZ69 625 aaKnown RBP16.08■□□□□ 0.16
TRIM35-201ENST00000305364 SPAG9O60271 1321 aaKnown RBP16.08■□□□□ 0.16
TRIM35-201ENST00000305364 KIF16BQ96L93 1317 aa16.08■□□□□ 0.16
TRIM35-201ENST00000305364 CFAP44Q96MT7 982 aa16.08■□□□□ 0.16
TRIM35-201ENST00000305364 TRIM27P14373 513 aa16.07■□□□□ 0.16
TRIM35-201ENST00000305364 MLECQ14165 292 aa16.07■□□□□ 0.16
TRIM35-201ENST00000305364 SSH1Q8WYL5 1049 aa16.07■□□□□ 0.16
TRIM35-201ENST00000305364 ASXL1Q8IXJ9 1541 aa16.07■□□□□ 0.16
TRIM35-201ENST00000305364 ADGRL2O95490 1459 aa16.07■□□□□ 0.16
TRIM35-201ENST00000305364 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
TRIM35-201ENST00000305364 PLEKHG5O94827 1062 aa16.06■□□□□ 0.16
TRIM35-201ENST00000305364 STK26Q9P289 416 aa16.06■□□□□ 0.16
TRIM35-201ENST00000305364 PIK3C2GO75747 1445 aa16.06■□□□□ 0.16
TRIM35-201ENST00000305364 RAPGEF6Q8TEU7 1601 aa16.06■□□□□ 0.16
TRIM35-201ENST00000305364 NUTM2DQ5VT03 806 aaPredicted RBP16.06■□□□□ 0.16
TRIM35-201ENST00000305364 A0A0U1RQG5 324 aaPredicted RBP16.05■□□□□ 0.16
TRIM35-201ENST00000305364 GAS2L3Q86XJ1 694 aa16.05■□□□□ 0.16
TRIM35-201ENST00000305364 STAC3Q96MF2 364 aa16.05■□□□□ 0.16
TRIM35-201ENST00000305364 FAM135AQ9P2D6 1515 aa16.05■□□□□ 0.16
TRIM35-201ENST00000305364 CDC45O75419 566 aa16.05■□□□□ 0.16
TRIM35-201ENST00000305364 MPNDQ8N594 471 aa16.05■□□□□ 0.16
TRIM35-201ENST00000305364 SYAP1Q96A49 352 aaPredicted RBP16.05■□□□□ 0.16
TRIM35-201ENST00000305364 A2MP01023 1474 aa16.05■□□□□ 0.16
TRIM35-201ENST00000305364 CHAF1AQ13111 956 aaPredicted RBP16.05■□□□□ 0.16
TRIM35-201ENST00000305364 MAGI1Q96QZ7 1491 aaPredicted RBP16.05■□□□□ 0.16
TRIM35-201ENST00000305364 CCDC141Q6ZP82 1450 aa16.04■□□□□ 0.16
TRIM35-201ENST00000305364 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
TRIM35-201ENST00000305364 PTPRGP23470 1445 aa16.04■□□□□ 0.16
TRIM35-201ENST00000305364 GPRASP1Q5JY77 1395 aa16.04■□□□□ 0.16
TRIM35-201ENST00000305364 ITSN2Q9NZM3 1697 aa16.04■□□□□ 0.16
TRIM35-201ENST00000305364 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
TRIM35-201ENST00000305364 SCAPERQ9BY12 1400 aa16.03■□□□□ 0.16
TRIM35-201ENST00000305364 BAG4O95429 457 aaKnown RBP16.03■□□□□ 0.16
TRIM35-201ENST00000305364 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
TRIM35-201ENST00000305364 RAB3GAP1Q15042 981 aa16.02■□□□□ 0.16
TRIM35-201ENST00000305364 GGT6Q6P531 493 aa16.02■□□□□ 0.16
TRIM35-201ENST00000305364 CCDC39Q9UFE4 941 aa16.02■□□□□ 0.16
TRIM35-201ENST00000305364 ERBB4Q15303 1308 aa16.02■□□□□ 0.16
TRIM35-201ENST00000305364 TMEM132EQ6IEE7 984 aa16.02■□□□□ 0.16
TRIM35-201ENST00000305364 MTERF4Q7Z6M4 381 aaKnown RBP16.02■□□□□ 0.15
TRIM35-201ENST00000305364 PRDM10Q9NQV6 1147 aa16.02■□□□□ 0.15
TRIM35-201ENST00000305364 SMC5Q8IY18 1101 aa16.02■□□□□ 0.15
TRIM35-201ENST00000305364 NSD3Q9BZ95 1437 aa16.01■□□□□ 0.15
TRIM35-201ENST00000305364 KLHL40Q2TBA0 621 aa16.01■□□□□ 0.15
TRIM35-201ENST00000305364 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
TRIM35-201ENST00000305364 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
TRIM35-201ENST00000305364 SNX21Q969T3 373 aa16.01■□□□□ 0.15
TRIM35-201ENST00000305364 OFD1O75665 1012 aa16.01■□□□□ 0.15
TRIM35-201ENST00000305364 RABEP1Q15276 862 aa16.01■□□□□ 0.15
TRIM35-201ENST00000305364 ARHGAP5Q13017 1502 aa16■□□□□ 0.15
TRIM35-201ENST00000305364 CT47B1P0C2W7 299 aaPredicted RBP16■□□□□ 0.15
TRIM35-201ENST00000305364 HDAC1Q13547 482 aaPredicted RBP16■□□□□ 0.15
TRIM35-201ENST00000305364 SCAF11Q99590 1463 aaKnown RBP16■□□□□ 0.15
TRIM35-201ENST00000305364 MCCP23508 829 aa15.99■□□□□ 0.15
TRIM35-201ENST00000305364 GCC1Q96CN9 775 aa15.99■□□□□ 0.15
TRIM35-201ENST00000305364 SYCE3A1L190 88 aa15.99■□□□□ 0.15
TRIM35-201ENST00000305364 TBC1D9Q6ZT07 1266 aa15.99■□□□□ 0.15
TRIM35-201ENST00000305364 GAS2L2Q8NHY3 880 aa15.99■□□□□ 0.15
TRIM35-201ENST00000305364 INTS3Q68E01 1043 aaKnown RBP15.98■□□□□ 0.15
TRIM35-201ENST00000305364 TMPOP42166 694 aaKnown RBP15.97■□□□□ 0.15
TRIM35-201ENST00000305364 ADGBQ8N7X0 1667 aa15.97■□□□□ 0.15
TRIM35-201ENST00000305364 BMP2KLQ5H9B9 411 aa15.97■□□□□ 0.15
TRIM35-201ENST00000305364 NUP160Q12769 1436 aa15.97■□□□□ 0.15
TRIM35-201ENST00000305364 DIAPH1O60610 1272 aaKnown RBP15.97■□□□□ 0.15
TRIM35-201ENST00000305364 AFAP1Q8N556 730 aa15.97■□□□□ 0.15
TRIM35-201ENST00000305364 RBM27Q9P2N5 1060 aaKnown RBP15.97■□□□□ 0.15
TRIM35-201ENST00000305364 KIAA0556O60303 1618 aa15.96■□□□□ 0.15
TRIM35-201ENST00000305364 PHF14O94880 888 aa15.96■□□□□ 0.15
TRIM35-201ENST00000305364 REC8O95072 547 aa15.96■□□□□ 0.15
TRIM35-201ENST00000305364 ZSCAN23Q3MJ62 389 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms